Synergistic interactions - dm_patterns
motifs_filename=/data/kreiman/databh/dm_patterns/analysis/cooc/check/dm_patterns2.100.4.3.0.38.5000.5000.5000.check-ensembl.out.txt
consensus_filename=/data/kreiman/databh/dm_patterns/analysis/dm_patterns2.dm.80.consensus.txt
transcripts_filename=/data/kreiman/databh/dm_patterns/dm_patterns2.txt
number of transcripts = 13 [n_transcripts_cl]
number of motifs = 271 [n_motifs_cl]
maximum distance (bp) = 100 [max_distance]
minimum distance factor = 0.50 [min_dist_factor]
interactions of 3 motifs [max_n_motifs]
scan threshold column = 38 [thresh_column]
seqlengths_filename = /data/kreiman/databh/dm_patterns/upstream_sequences/dm_patterns2.dm.ensembl.lengths.txt and none
motifpos_filename = /data/kreiman/databh/dm_patterns/analysis/cooc/check/dm_patterns2.100.4.3.0.38.5000.5000.5000.check-ensembl.pos-cl.txt and none
seqs_filename = /data/kreiman/databh/dm_patterns/upstream_sequences/dm_patterns2.dm.ensembl.fasta and none
robustness_filename = /data/kreiman/databh/dm_patterns/analysis/cooc/check/compare_cooc_outputs.dm_patterns2.mul.3.txt
wm_filename = /data/kreiman/databh/dm_patterns/analysis/dm_patterns2.dm.80.matlab.txt
species = dm
max_n_motifs = 3
order constraint = false
number of modules = 129 [n_cooc]
number of modules after filter = 129 [n_cooc_actual]
Click on the motif ID numbers to get further information about the motifs.
Click on n_cooc_tr_cl (the number of transcripts with non-overlapping co-occurrences within the distance and order constraints) to see a list of the transcripts and positions
Click on p_binom_sp1 to see a plot of the occurrences of the motif cluster in each transcript (Figure legend)
                                       
Summary of results
i id1 id2 id3 consensus m1 consensus m2 consensus m3 ml1 ml2 ml3 map1 map2 map3 r_oc_sp1 r_tr_sp1 n_cooc_all n_cooc_tr_all n_cooc_cl n_cooc_tr_cl p_binom
1 214 215 n kdkcsksmmaw ynncyckvkrnnannnk none 11 17 0 8.24224 2.25513 n 524.58 524.58 8 8 4 4 8.40E-11
2 173 215 n knsnnmnnnskcrkvnr ynncyckvkrnnannnk none 17 17 0 9.89915 2.25513 n 374.7 322.82 14 13 5 4 1.30E-10
3 93 268 n tkkcmnwnaaaa nnnyaaad none 12 8 0 25.2437 8 n 29.01 21.63 434 388 12 8 4.10E-10
4 64 215 n raaannrnvarar ynncyckvkrnnannnk none 13 17 0 8.72593 2.25513 n 114.75 97.14 64 54 7 5 7.50E-10
5 14 35 212 nnnkddwhkrsnnn dkccawaaam vaaaahnnnnnnnnnnnnvnnnnaaa 14 10 26 I_ABDB_01 44.4408 96.7282 24.98 28.47 336 258 8 7 1.10E-09
6 204 231 n aaarrhvnnsrnar tttttatk none 14 8 0 10.8193 113.063 n 7.71 6.08 2992 2070 22 12 1.60E-09
7 264 270 270 aayccktt vamnkrrtbd vamnkrrtbd 8 10 10 114.762 10 10 75.29 26.23 864 280 62 7 2.00E-09
8 89 212 256 aaaawtdrtk vaaaahnnnnnnnnnnnnvnnnnaaa amytarcc 10 26 8 2.36745 96.7282 102.757 56.71 68.13 111 77 6 5 5.10E-09
9 100 268 n kckmrnnnaandyk nnnyaaad none 14 8 0 2.20732 8 n 54.93 36.6 191 172 10 6 5.20E-09
10 270 270 n vamnkrrtbd vamnkrrtbd none 10 10 0 10 10 n 33.84 15.32 1240 548 40 8 6.50E-09
11 147 186 207 rnrkkdknnnnnkdnnnnkknnk mwnnnnnkchkcsarv bkssnnknnknnnrkkk 23 16 17 0.0171907 10.674 6.40808 131.14 149.88 32 28 4 4 6.80E-09
12 204 233 268 aaarrhvnnsrnar yakktakv nnnyaaad 14 8 8 10.8193 124.29 8 277.72 149.88 34 28 9 4 6.80E-09
13 35 212 n dkccawaaam vaaaahnnnnnnnnnnnnvnnnnaaa none 10 26 0 44.4408 96.7282 n 13.12 8.43 1679 1245 21 10 8.20E-09
14 64 224 n raaannrnvarar vbsrnknnkkcnks none 13 14 0 8.72593 3.10455 n 30.65 21.1 445 348 13 7 9.20E-09
15 233 268 n yakktakv nnnyaaad none 8 8 0 124.29 8 n 37.57 20.75 391 354 14 7 1.00E-08
16 35 268 n dkccawaaam nnnyaaad none 10 8 0 44.4408 8 n 15.94 14.13 724 594 11 8 1.20E-08
17 43 64 202 anatkcaamdnk raaannrnvarar annkchkcnvhnnmr 12 13 15 13.8396 8.72593 14.5469 170.13 131.14 37 32 6 4 1.30E-08
18 100 212 n kckmrnnnaandyk vaaaahnnnnnnnnnnnnvnnnnaaa none 14 26 0 2.20732 96.7282 n 19.29 20.12 435 365 8 7 1.30E-08
19 31 41 261 khrnkhknkwknknknndr vakhrarhkrk kcactcav 19 11 8 118.386 22.0843 105.574 85.24 54.08 160 97 13 5 1.70E-08
20 35 177 n dkccawaaam tdnnmhhnammaaaa none 10 15 0 44.4408 1.84039 n 16.53 13.34 698 629 11 8 1.90E-08
21 95 135 n shynhtkkccka rntykkccavnnks none 12 14 0 6.2064 3.37689 n 27.48 18.22 420 403 11 7 2.60E-08
22 102 243 n tnttknnndnwnaawaa kkkrttty none 17 8 0 35.9758 95.1165 n 28.8 27.61 255 228 7 6 2.90E-08
23 59 247 261 maahnkcdkcnvch yctstmkc kcactcav 14 8 8 2.20101 114.515 105.574 97.14 107.61 54 39 5 4 3.00E-08
24 35 204 268 dkccawaaam aaarrhvnnsrnar nnnyaaad 10 14 8 44.4408 10.8193 8 46.78 47.26 157 111 7 5 3.50E-08
25 161 212 223 ksnkvnnsnsynkbnrnnnnnv vaaaahnnnnnnnnnnnnvnnnnaaa knsrnbrknrknkknndnnr 22 26 20 11.6544 96.7282 15.6694 93.67 102.36 56 41 5 4 3.80E-08
26 100 231 n kckmrnnnaandyk tttttatk none 14 8 0 2.20732 113.063 n 43.71 46.42 120 113 5 5 3.80E-08
27 95 244 n shynhtkkccka krttycyk none 12 8 0 6.2064 92.3561 n 99.92 99.92 42 42 4 4 4.20E-08
28 208 214 n kskrknrrknkvk kdkcsksmmaw none 13 11 0 4.55535 8.24224 n 40.98 44.08 128 119 5 5 5.00E-08
29 48 246 n maawksvaaa kymtacck none 10 8 0 5.02275 78.5479 n 20.79 14.93 555 492 11 7 1.00E-07
30 144 201 n rvdhkmtkckaw vnnbnnnvkcakckr none 12 15 0 2.70818 14.5729 n 44.64 38.01 141 138 6 5 1.10E-07
31 98 121 n skksnnkkkknrd atbkccksbk none 13 10 0 1.48853 7.23416 n 88.91 80.7 59 52 5 4 1.10E-07
32 182 214 n kdkckrnnndnannnnnnknbnk kdkcsksmmaw none 23 11 0 3.26998 8.24224 n 92.03 79.18 57 53 5 4 1.20E-07
33 49 84 268 amannmamannnrha aaawnanhantttna nnnyaaad 15 15 8 156.609 5.31045 8 99.92 77.72 63 54 6 4 1.30E-07
34 189 220 n kkrnnnkbkknnnknkk rmknncrvdarnck none 17 14 0 2.08843 2.19853 n 47.08 36.43 156 144 7 5 1.30E-07
35 72 205 n rmaaanvkcnkmnm ynkcdknkmbynkc none 14 14 0 10.4987 8.69747 n 84.61 76.3 62 55 5 4 1.40E-07
36 95 270 n shynhtkkccka vamnkrrtbd none 12 10 0 6.2064 10 n 71.13 76.3 59 55 4 4 1.40E-07
37 64 171 n raaannrnvarar kcnkshnrncranns none 13 15 0 8.72593 5.68814 n 19.08 14.02 660 524 12 7 1.60E-07
38 174 205 n kcsrkckvsm ynkcdknkmbynkc none 10 14 0 8.96466 8.69747 n 81.97 73.62 64 57 5 4 1.60E-07
39 41 163 n vakhrarhkrk snnnnncnbnssmnndnnskynks none 11 24 0 22.0843 7.68625 n 51.04 34.74 185 151 9 5 1.70E-07
40 64 182 261 raaannrnvarar kdkckrnnndnannnnnnknbnk kcactcav 13 23 8 8.72593 3.26998 105.574 53.8 72.36 78 58 4 4 1.70E-07
41 101 102 n aawdwnhnnnnaawaaw tnttknnndnwnaawaa none 17 17 0 37.1278 35.9758 n 6.59 4.99 3660 2314 23 11 1.80E-07
42 91 204 240 aawtwrtthaa aaarrhvnnsrnar whastaac 11 14 8 31.8931 10.8193 99.0364 72.86 71.13 72 59 5 4 1.80E-07
43 98 205 n skksnnkkkknrd ynkcdknkmbynkc none 13 14 0 1.48853 8.69747 n 62.64 69.94 67 60 4 4 2.00E-07
44 163 205 n snnnnncnbnssmnndnnskynks ynkcdknkmbynkc none 24 14 0 7.68625 8.69747 n 36.18 33.2 174 158 6 5 2.10E-07
45 113 231 n aaarnndkraaa tttttatk none 12 8 0 0.542878 113.063 n 13.3 13.35 631 550 8 7 2.20E-07
46 35 143 268 dkccawaaam vmaaancvaam nnnyaaad 10 11 8 44.4408 3.87667 8 58.29 67.69 72 62 4 4 2.30E-07
47 31 83 261 khrnkhknkwknknknndr rrknkvdararnk kcactcav 19 13 8 118.386 9.75181 105.574 58.94 32.58 267 161 15 5 2.30E-07
48 179 233 n kcnkmranrannnnna yakktakv none 16 8 0 6.16361 124.29 n 29.98 32.58 175 161 5 5 2.30E-07
49 74 237 n cnkvkakcrkc hckctcrc none 11 8 0 4.09333 101.351 n 22.93 19.37 366 325 8 6 2.40E-07
50 35 143 n dkccawaaam vmaaancvaam none 10 11 0 44.4408 3.87667 n 10.15 9.64 1137 871 11 8 2.50E-07
51 93 231 268 tkkcmnwnaaaa tttttatk nnnyaaad 12 8 8 25.2437 113.063 8 46.06 32.18 205 163 9 5 2.50E-07
52 185 197 n rnkwktktkyr kkckkcmmwnr none 11 11 0 29.4071 9.50267 n 25.1 30.5 209 172 5 5 3.30E-07
53 73 214 n dnbnknnkksnnrkkk kdkcsksmmaw none 16 11 0 9.28687 8.24224 n 73.88 61.71 71 68 5 4 3.40E-07
54 83 83 241 rrknkvdararnk rrknkvdararnk ccmtttcs 13 13 8 9.75181 9.75181 116.042 33.41 29.98 628 175 20 5 3.60E-07
55 258 269 n rtaaaaar ntttttrnbnb none 8 11 0 102.496 11 n 7.92 7.11 1590 1328 12 9 3.70E-07
56 83 185 261 rrknkvdararnk rnkwktktkyr kcactcav 13 11 8 9.75181 29.4071 105.574 42.89 29.64 318 177 13 5 3.80E-07
57 189 225 n kkrnnnkbkknnnknkk mkcrsnndvrkcks none 17 14 0 2.08843 1.65577 n 63.2 59.95 83 70 5 4 3.80E-07
58 47 164 n kcvaamkkrtw dnrnnnknsrnnknknndknnnnnknv none 11 27 0 6.25033 4.98522 n 67.25 59.95 78 70 5 4 3.80E-07
59 130 209 n kkktkkkbkdnnrk aaanwmnnnnnnnnnnnadnnnnndaa none 14 27 0 1.81006 115.569 n 15.15 12.28 762 598 11 7 3.90E-07
60 48 124 192 maawksvaaa aamarmarva ksckbykyhkbnknbnnnk 10 10 19 5.02275 53.1201 8.39723 64.42 58.29 114 72 7 4 4.30E-07
61 166 188 n rrvakcsaaa aawthkcykb none 10 10 0 0.683489 3.55742 n 19.13 17.58 384 358 7 6 4.30E-07
62 196 234 n kybrnnnnmnnnkscrkh tttctktt none 18 8 0 12.6596 112.022 n 43.51 28.2 217 186 9 5 4.80E-07
63 177 244 n tdnnmhhnammaaaa krttycyk none 15 8 0 1.84039 92.3561 n 10.6 11.37 693 646 7 7 6.60E-07
64 41 170 261 vakhrarhkrk wnnsakmkannnhk kcactcav 11 14 8 22.0843 6.50325 105.574 54.9 52.46 172 80 9 4 6.60E-07
65 163 208 n snnnnncnbnssmnndnnskynks kskrknrrknkvk none 24 13 0 7.68625 4.55535 n 21.27 16.35 444 385 9 6 6.70E-07
66 202 231 n annkchkcnvhnnmr tttttatk none 15 8 0 14.5469 113.063 n 14.92 16.31 422 386 6 6 6.80E-07
67 64 173 n raaannrnvarar knsnnmnnnskcrkvnr none 13 17 0 8.72593 9.89915 n 12.44 6.6 2024 1430 24 9 7.00E-07
68 209 236 n aaanwmnnnnnnnnnnnadnnnnndaa tcmtaatt none 27 8 0 115.569 104.259 n 6.03 5.31 2609 1976 15 10 7.30E-07
69 87 267 n kbmmaaankkc hdaakcbb none 11 8 0 8.52225 8 n 50.56 51.18 83 82 4 4 7.30E-07
70 64 247 261 raaannrnvarar yctstmkc kcactcav 13 8 8 8.72593 114.515 105.574 53.35 51.18 118 82 6 4 7.30E-07
71 157 208 261 kknnwknkkkdktk kskrknrrknkvk kcactcav 14 13 8 52.5438 4.55535 105.574 59.95 48.8 140 86 8 4 8.90E-07
72 208 261 n kskrknrrknkvk kcactcav none 13 8 0 4.55535 105.574 n 28.65 15.54 476 405 13 6 9.00E-07
73 156 201 n kntcrywkcka vnnbnnnvkcakckr none 11 15 0 2.46783 14.5729 n 48.24 48.24 87 87 4 4 9.40E-07
74 147 194 n rnrkkdknnnnnkdnnnnkknnk dnkcnkscnrncra none 23 14 0 0.0171907 3.83721 n 77.31 47.15 95 89 7 4 1.00E-06
75 146 233 n cmaamaarmr yakktakv none 10 8 0 0.120609 124.29 n 13.11 15.17 480 415 6 6 1.00E-06
76 64 194 n raaannrnvarar dnkcnkscnrncra none 13 14 0 8.72593 3.83721 n 13.16 14.47 558 435 7 6 1.40E-06
77 63 64 64 kkcrknksyknc raaannrnvarar raaannrnvarar 12 13 13 11.5441 8.72593 8.72593 116.57 43.26 306 97 34 4 1.50E-06
78 201 203 n vnnbnnnvkcakckr vaaanknsvkcnsnr none 15 15 0 14.5729 11.2875 n 51.43 43.26 102 97 5 4 1.50E-06
79 214 218 n kdkcsksmmaw ksksnnnnkbnkkndnnnnknnk none 11 23 0 8.24224 6.3427 n 50.93 42.82 103 98 5 4 1.50E-06
80 196 205 n kybrnnnnmnnnkscrkh ynkcdknkmbynkc none 18 14 0 12.6596 8.69747 n 54.27 40.74 116 103 6 4 1.90E-06
81 196 260 n kybrnnnnmnnnkscrkh ctaatyrh none 18 8 0 12.6596 98.6907 n 38.86 40.74 108 103 4 4 1.90E-06
82 10 177 196 mkaad tdnnmhhnammaaaa kybrnnnnmnnnkscrkh 5 15 18 I_HSF_01 1.84039 12.6596 65.98 40.35 159 104 10 4 2.00E-06
83 176 203 n awhahawnnnhanwwwhanw vaaanknsvkcnsnr none 20 15 0 2.12932 11.2875 n 19.5 21.24 269 247 5 5 2.00E-06
84 247 261 n yctstmkc kcactcav none 8 8 0 114.515 105.574 n 27.27 13.48 577 467 15 6 2.10E-06
85 180 196 n vnaaannnnnnmamamd kybrnnnnmnnnkscrkh none 17 18 0 98.7525 12.6596 n 16.42 13.48 639 467 10 6 2.10E-06
86 64 231 270 raaannrnvarar tttttatk vamnkrrtbd 13 8 10 8.72593 113.063 10 42.53 38.5 148 109 6 4 2.40E-06
87 45 101 n kkbkrkcvkc aawdwnhnnnnaawaaw none 10 17 0 7.71919 37.1278 n 17.31 20.49 303 256 5 5 2.40E-06
88 150 269 n aaaamkkkkk ntttttrnbnb none 10 11 0 10.9678 11 n 44.46 38.15 118 110 5 4 2.50E-06
89 41 241 n vakhrarhkrk ccmtttcs none 11 8 0 22.0843 116.042 n 23.24 20.25 316 259 7 5 2.50E-06
90 141 170 190 knvtkkktkhrt wnnsakmkannnhk smkmkaknknrh 12 14 12 46.7937 6.50325 19.6081 18.73 20.18 504 260 9 5 2.60E-06
91 74 124 n cnkvkakcrkc aamarmarva none 11 10 0 4.09333 53.1201 n 31.32 37.47 134 112 4 4 2.70E-06
92 170 240 n wnnsakmkannnhk whastaac none 14 8 0 6.50325 99.0364 n 20.91 20.02 301 262 6 5 2.70E-06
93 95 122 n shynhtkkccka cdkscakbnks none 12 11 0 6.2064 7.16415 n 18.28 19.87 287 264 5 5 2.80E-06
94 89 256 n aaaawtdrtk amytarcc none 10 8 0 2.36745 102.757 n 15.54 12.79 540 492 8 6 2.80E-06
95 178 182 n ssnnnnnknnknnsnnknkskc kdkckrnnndnannnnnnknbnk none 22 23 0 19.3435 3.26998 n 22.95 19.65 320 267 7 5 3.00E-06
96 76 100 212 aannnnnnraaamnnrwa kckmrnnnaandyk vaaaahnnnnnnnnnnnnvnnnnaaa 18 14 26 49.0637 2.20732 96.7282 24.12 35.56 174 118 4 4 3.30E-06
97 64 205 n raaannrnvarar ynkcdknkmbynkc none 13 14 0 8.72593 8.69747 n 18.57 19.01 339 276 6 5 3.50E-06
98 122 171 n cdkscakbnks kcnkshnrncranns none 11 15 0 7.16415 5.68814 n 17.6 18.8 298 279 5 5 3.70E-06
99 84 229 n aaawnanhantttna ttaskttt none 15 8 0 5.31045 106.258 n 18.27 17.96 402 292 7 5 4.60E-06
100 67 76 223 aaaawnwnnnnnwnwtnd aannnnnnraaamnnrwa knsrnbrknrknkknndnnr 18 18 20 81.3547 49.0637 15.6694 41.73 32.53 176 129 7 4 4.70E-06
101 163 253 n snnnnncnbnssmnndnnskynks ccccyhcc none 24 8 0 7.68625 111.806 n 20.51 17.78 358 295 7 5 4.80E-06
102 85 100 n wdwaawnwnaahnnntt kckmrnnnaandyk none 17 14 0 76.6851 2.20732 n 31.55 32.28 133 130 4 4 4.90E-06
103 36 93 113 aawannnwnnnwwttw tkkcmnwnaaaa aaarnndkraaa 16 12 12 44.2362 25.2437 0.542878 66.97 80.7 47 39 3 3 5.20E-06
104 233 270 n yakktakv vamnkrrtbd none 8 10 0 124.29 10 n 34.76 17.2 332 305 11 5 5.70E-06
105 182 261 n kdkckrnnndnannnnnnknbnk kcactcav none 23 8 0 3.26998 105.574 n 25.25 17.14 374 306 9 5 5.80E-06
106 45 98 n kkbkrkcvkc skksnnkkkknrd none 10 13 0 7.71919 1.48853 n 35.21 30.86 149 136 5 4 5.80E-06
107 9 174 n bvvhwaaran kcsrkckvsm none 10 10 0 I_HB_01 8.96466 n 27.25 29.55 154 142 4 4 7.00E-06
108 9 102 180 bvvhwaaran tnttknnndnwnaawaa vnaaannnnnnmamamd 10 17 17 I_HB_01 35.9758 98.7525 12.49 16.39 504 320 6 5 7.20E-06
109 194 207 n dnkcnkscnrncra bkssnnknnknnnrkkk none 14 17 0 3.83721 6.40808 n 21.3 15.8 394 332 8 5 8.70E-06
110 101 217 252 aawdwnhnnnnaawaaw aaddwanndwanttndntnnnww htttcccd 17 23 8 37.1278 19.54 106.177 36.54 27.98 201 150 7 4 8.70E-06
111 196 212 n kybrnnnnmnnnkscrkh vaaaahnnnnnnnnnnnnvnnnnaaa none 18 26 0 12.6596 96.7282 n 20.52 15.66 409 335 8 5 9.10E-06
112 146 163 n cmaamaarmr snnnnncnbnssmnndnnskynks none 10 24 0 0.120609 7.68625 n 13.42 15.43 391 340 5 5 9.80E-06
113 71 268 n knnnscnnnnnnnntkkcmanv nnnyaaad none 22 8 0 11.4903 8 n 24.98 26.73 168 157 4 4 1.00E-05
114 64 225 n raaannrnvarar mkcrsnndvrkcks none 13 14 0 8.72593 1.65577 n 25.59 26.07 205 161 5 4 1.20E-05
115 85 220 n wdwaawnwnaahnnntt rmknncrvdarnck none 17 14 0 76.6851 2.19853 n 27.46 24.54 191 171 5 4 1.50E-05
116 69 178 n tktkwktkyb ssnnnnnknnknnsnnknkskc none 10 22 0 77.704 19.3435 n 36.54 24.26 201 173 7 4 1.50E-05
117 170 188 n wnnsakmkannnhk aawthkcykb none 14 10 0 6.50325 3.55742 n 27.76 24.12 189 174 5 4 1.60E-05
118 190 247 261 smkmkaknknrh yctstmkc kcactcav 12 8 8 19.6081 114.515 105.574 55.38 23.98 341 175 18 4 1.60E-05
119 180 225 n vnaaannnnnnmamamd mkcrsnndvrkcks none 17 14 0 98.7525 1.65577 n 18.9 23.84 222 176 4 4 1.70E-05
120 81 227 n kynkscakcsm kksnknbdnnnndnnnkckks none 11 21 0 5.18876 16.9015 n 16.99 13.84 494 379 8 5 1.70E-05
121 187 201 n ckctkbkwdns vnnbnnnvkcakckr none 11 15 0 4.07677 14.5729 n 17.87 13.7 411 383 7 5 1.70E-05
122 45 64 n kkbkrkcvkc raaannrnvarar none 10 13 0 7.71919 8.72593 n 16.99 13.59 494 386 8 5 1.80E-05
123 150 268 n aaaamkkkkk nnnyaaad none 10 8 0 10.9678 8 n 27.18 22.93 193 183 5 4 1.90E-05
124 76 213 n aannnnnnraaamnnrwa kwktnnkwtkbdknt none 18 15 0 49.0637 14.1138 n 11.42 9.04 919 696 10 6 2.10E-05
125 64 177 244 raaannrnvarar tdnnmhhnammaaaa krttycyk 13 15 8 8.72593 1.84039 92.3561 20.41 21.3 257 197 5 4 2.60E-05
126 256 264 n amytarcc aayccktt none 8 8 0 102.757 114.762 n 18.37 12.46 457 421 8 5 2.80E-05
127 146 259 n cmaamaarmr ckrwwkck none 10 8 0 0.120609 100.498 n 5.61 7.9 1495 797 8 6 4.60E-05
128 207 220 n bkssnnknnknnnrkkk rmknncrvdarnck none 17 14 0 6.40808 2.19853 n 14.78 17.49 284 240 4 4 5.70E-05
129 9 10 25 bvvhwaaran mkaad vyatawadvnvnnnn 10 5 15 I_HB_01 I_HSF_01 V_TATA_01 15.94 16.65 395 252 6 4 6.90E-05
i id1 id2 id3 consensus m1 consensus m2 consensus m3 ml1 ml2 ml3 map1 map2 map3 r_oc_sp1 r_tr_sp1 n_cooc_all n_cooc_tr_all n_cooc_cl n_cooc_tr_cl p_binom
Questions? --> kreiman@mit.edu
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