Search for cis regulatory regions - Request code

1. (REQUIRED) This service is available free of charge for researchers in academic institutions. You must agree to the following License Agreement to use the software.

2. (REQUIRED) Paste fasta-formatted sequence here or list of identifiers (e.g. LocusLink numbers)

3. (OPTIONAL) Parameters

3.1. Upstream sequence length: base pairs [default = 5 kb]

3.2. Include first exon and first intron? YES NO [default = yes]

3.3. Maximum distance between motifs: [default = 100 bp]

3.4. Minimum number of transcripts with regulatory region: [default = 4]

3.5. Species [default = hs]

3.6. Motifs.

3.7 Run single motif search [default = on]

3.8 Use motifs from TRANSFAC [default = on]



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Subject: (basic description)

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