HSF1 and YAP1 - Google Scholar

The Skn7 response regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is required … - Full text - MIT Libraries
DC Raitt, AL Johnson, AM Erkine, K Makino, B … - Mol. Biol. Cell, 2000 - intl.molbiolcell.org
... Hsf1 associated with 6His-tagged Skn7 on nickel-agarose beads. Previous work had
suggested that Skn7 interacts with a number of proteins, including Yap1 ( ...
Cited by 24 - Web Search - pubmedcentral.nih.gov - molbiolcell.org - ncbi.nlm.nih.gov - all 5 versions »

Table 1 Coooperative pairs of TFs with P B< 0.0001
TF TF, TF TF - nar.oupjournals.org
... 42, ROX1, SOK2, 5.68E-07. 43, ASH1, SOK2, 8.99E-07. 44, GAL4, LEU3, 1.07E-06. 45,
FKH2, HSF1, 1.97E-06. 46, ROX1, YAP1, 3.13E-06. 47, GAL4, MSN1, 4.14E-06. 48, ...
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Network Component Analysis of Saccharamyces cerevisiae Stress Response
YL Yang, JC Liao - ieeexplore.ieee.org
... results are in accordance with the previous results that Yap1 is more specific to
oxidative stress [10] and the heat shock transcription factor Hsf1 and the ...
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Stress induction of HSP30, the plasma membrane heat shock protein gene of Saccharomyces cerevisiae, … - Full text - MIT Libraries
IJ Seymour, PW Piper - Microbiology, 1999 - mic.sgmjournals.org
... isogenic wild-type W303-1A (lanes 1, 3 and 5); also the hsf1-m3 mutant ... One is the
binding site for Yap1 protein homologues (consensus TTACTAA; Fernandes et al ...
Cited by 13 - Web Search - mic.sgmjournals.org

Modeling the Combinatorial Functions of Multiple Transcription Factors
CH Yeang, T Jaakkola - springerlink.com
Page 1. Modeling the Combinatorial Functions of Multiple Transcription Factors
Chen-Hsiang Yeang and Tommi Jaakkola Computer Science ...
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The yeast stress response - Full text - MIT Libraries
C Rodrigues-Pousada, T Nevitt, R Menezes - FEBS J, 2005 - content.febsjournal.org
... degradation and transcriptional regulation, and by proteins that form a stress response
network, including Fhl1, Msn2 Msn4, Yap1, Cad1 (Yap2), Hsf1 and Rpn4 ...
Cached - Web Search - blackwell-synergy.com - content.febsjournal.org - ncbi.nlm.nih.gov

The Skn 7 response regulator controls gene expression in the oxidative stress response of the … - Full text - MIT Libraries
BA Morgan, GR Banks, WM Toone, D Raitt, S Kuge, LH … - The EMBO Journal, 1997 - embojournal.npgjournals.com
... Yap1 binding site 2 (Kuge and Jones, 1994 ) and the potential TATA sequence (Figure
5A and C). The potential DNA binding domain of Skn7 has homology to HSF1 and ...
Cited by 91 - Web Search - nature.com - emboj.org - ncbi.nlm.nih.gov - all 6 versions »

Yap 1 and Skn 7 Control Two Specialized Oxidative Stress Response Regulons in Yeast - Full text - MIT Libraries
J Lee, C Godon, G Lagniel, D Spector, J Garin, J … - J Biol Chem, 1999 - jbc.org
... family (12) that binds the sequence T(T/G)ACTAA termed the Yap1 response element ...
a domain similar to the DNA-binding domain of heat shock factor (Hsf1) (15, 16 ...
Cited by 105 - Web Search - jbc.org - ncbi.nlm.nih.gov

Integrating phenotypic and expression profiles to map arsenic-response networks - Full text - MIT Libraries
A Haugen, R Kelley, J Collins, C Tucker, C Deng, C … - Genome Biology, 2004 - dx.doi.org
... process resulted in the identification of seven significant neighborhoods in the
regulatory network, centered on nodes Fhl1, Pre1, Yap1, Cad1, Hsf1, Msn2 and ...
Cited by 4 - Web Search - bmc.ub.uni-potsdam.de - www-bioeng.ucsd.edu - genomebiology.com - all 10 versions »

Predicting Genetic Regulatory Response Using Classification
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - Arxiv preprint q-bio.QM/0411028, 2004 - arxiv.org
... genes [4]. The other high scoring motifs include HSF1 (heat-shock ... Pol- I transcription
termination activity), GAL4 (galactose metabolism), YAP1 (peroxide stress ...
Cited by 10 - View as HTML - Web Search - cs.princeton.edu - math.biu.ac.il - cs.utsa.edu - all 14 versions »

BIOINFORMATICS - Full text - MIT Libraries
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - BIOINFORMATICS, 2004 - bioinformatics.oupjournals.org
Page 1. VOLUME 20 SUPPLEMENT 1 4 AUGUST 2004 PAGES i232–i240 BIOINFORMATICS
Electronic edition http://bioinformatics.oupjournals.org ...
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Predicting Genetic Regulatory Response using Classification: Yeast Stress Response
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - Arxiv preprint q-bio.QM/0406016, 2004 - springerlink.com
... USV1 and PPT1, we find that the mRNA levels of MSN2 and HSF1 have small ... TPK1 are
the top three regulators, we see the emer- gence of an important parent, YAP1. ...
Web Search - arxiv.org - cs.columbia.edu - adsabs.harvard.edu - all 6 versions »

The Saccharomyces cerevisiae HSP12 gene is activated by the high-osmolarity glycerol pathway and … - Full text - MIT Libraries
JCS Varela, UM Praekelt, PA Meacock, RJ Planta, WH … - Mol Cell Biol, 1995 - mcb.asm.org
... 68 MYY385 MATa leu2 his3 phoC phoE ura3 hsf1-m3 Congenic to MYY290 SEY6210 MAT leu2
ura3 lys2 trp1 his3 85 SM10 MAT leu2 ura3 lys2 trp1 his3 yap1- 1::HIS3 ...
Cited by 99 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

6 Oxidative stress responses in yeast
MB Toledano, A Delaunay, B Biteau, D Spector, D … - springerlink.com
Page 1. 6 Oxidative stress responses in yeast Michel B. Toledano 1 , Agnes Delaunay
1 , Benoit Biteau 1 , Daniel Spector 1,2 , Dulce Azevedo 1,3 ...
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Reactive oxygen species may influence the heat shock response and stress tolerance in the … - Full text - MIT Libraries
C Moraitis, BPG Curran - Yeast, 2004 - doi.wiley.com
... factor 1 (Hsf1) encoded by the essential HSF1 gene (Sorger and Pelham,
1988). In S. cerevisiae, unlike metazoan systems, the Hsf1 ...
Cited by 2 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Aging and molecular chaperones
C Soti, P Csermely - Exp Gerontol, 2003 - chaperone.sote.hu
... than rate of respiration and is enhanced in pos9 but not yap1 mutants. ... Heat-induced
proteasomic degradation of HSF1 in serum-starved human fibroblasts aging in ...
Cited by 11 - View as HTML - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

References Added to SGD This Week
P Navigation, L Navigation - yeastgenome.org
... Cell Biol 24(9):3648-59 SGD Papers Entry Pubmed Entry Reference LINKOUT, |HSF1. ... Biol
Chem 279(23):24540-51 SGD Papers Entry Pubmed Entry Reference LINKOUT, |YAP1 ...
Cached - Web Search

Redox regulation of mammalian heat shock factor 1 is essential for Hsp gene activation and … - Full text - MIT Libraries
SG Ahn, DJ Thiele - Genes & Development, 2003 - genesdev.org
... Alternatively, the HSF1 homotrimer could mask a nuclear export signal or abrogate ...
in nuclear export have been demonstrated for the yeast Yap1 protein, which ...
Cited by 19 - Web Search - biochem.med.umich.edu - pubmedcentral.nih.gov - dx.doi.org - all 7 versions »

Supporting online material for: Transcriptional Regulatory Networks in Saccharomyces cerevisiae
GL Analysis - statgen.ncsu.edu
... Hap4 CCAATNA 60 21 8E-10 Hsf1 GAANNTTCNNGAA 43 1 6E-21 Ino2 ATGTGAAA 56 4 7E-06 ... Swi4
CACGAAA 24 7 2E-09 Swi6 CACGAAA 27 7 3E-08 Yap1 TTACTAA 54 12 9E-11 ...
View as HTML - Web Search - statgen.ncsu.edu

Signalling Stress in Yeast
JC Igual, F Estruch - Food Technol Biotechnol, 2000 - jagor.srce.hr
... Thus, the transcrip- tion factor Yap1 is regulated at the level of cellular local-
ization, through a C-terminal cysteine-rich domain that acts directly as ...
Cited by 1 - View as HTML - Web Search - pubwww.srce.hr - public.srce.hr - jagor.srce.hr - all 5 versions »

The NuA4 transcription activation/histone H4 acetyltransferase complex contains the essential Esa1 …
S Allard, RT Utley, J Savard, A Clarke, P Grant, … - Biochem. Cell Biol, 1999 - article.pubs.nrc-cnrc.gc.ca
... sites of the heat shock (hs) genes and stress activated transcription of these genes
is mediated by a transcription factor known as heat shock factor 1 (HSF1). ...
Web Search - article.pubs.nrc-cnrc.gc.ca - Get it from MIT Libraries

Mutations in WSC genes for putative stress receptors result in sensitivity to multiple stress … - Full text - MIT Libraries
T Zu, J Verna, R Ballester - Mol. Genet. Genomics, 2001 - springerlink.com
... 1997). YAP1 was deleted in the strain TZwt-1 (MATa leu2 his3 ura3 trp1 ade8,
this study) as described previously (Wu et al. 1993). ...
Cited by 14 - Web Search - ncbi.nlm.nih.gov

Regulation of the transcriptional response to oxidative stress in fungi: similarities and … - Full text - MIT Libraries
WS Moye-Rowley - Eukaryot Cell, 2003 - intl-ec.asm.org
... Yeast YAP1 encodes a novel form of the jun family of transcriptional ... The Skn7 response
regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is ...
Cited by 5 - Cached - Web Search - ncbi.nlm.nih.gov

Mini Forum Review
WS MOYE-ROWLEY - ANTIOXIDANTS & REDOX SIGNALING, 2002 - dx.doi.org
... and loss of the SKN7 gene exacerbates the peroxide sensitivity of a hypomorphic
HSF1 allele. ... for ox- idative stress tolerance in S. cerevisiae is the YAP1 locus ...
Cited by 2 - Web Search - liebertonline.com - liebertonline.com

BIOINFORMATICS ORIGINAL PAPER
P Hong, XS Liu, Q Zhou, X Lu, JS Liu, WH Wong - fas.harvard.edu
Page 1. BIOINFORMATICS ORIGINAL PAPER Vol. 21 no. 11 2005, pages
2636–2643 doi:10.1093/bioinformatics/bti402 Sequence analysis ...
View as HTML - Web Search - serine.umdnj.edu

Oxidative stress is involved in heat-induced cell death in Saccharomyces cerevisiae
JF Davidson, B Whyte, PH Bissinger, RH Schiestl - Microbiology, 1996 - dx.doi.org
... Skn7 Response Regulator of Saccharomyces cerevisiae Interacts with Hsf1 In Vivo ... Kimura
Thioredoxin Deficiency Causes the Constitutive Activation of Yap1, an AP ...
Cited by 69 - Web Search - pnas.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 7 versions » - Get it from MIT Libraries

Oxidative stress responses of the yeast Saccharomyces cerevisiae - Full text - MIT Libraries
DJ Jamieson - Yeast, 1998 - doi.wiley.com
Page 1. YEAST Yeast 14, 1511–1527 (1998) Oxidative Stress Responses of the
Yeast Saccharomyces cerevisiae DEREK J. JAMIESON* Department ...
Cited by 101 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov

Regulation of the OxyR transcription factor by hydrogen peroxide and the cellular thiol---disulfide … - Full text - MIT Libraries
F Aaslund, M Zheng, J Beckwith, G Storz - Biochemistry, 1999 - dx.doi.org
... Detection, and Characterization of Redox Conformers of Human HSF1 J. Biol. ... and MB
Toledano H2O2 sensing through oxidation of the Yap1 transcription factor EMBO ...
Cited by 38 - Web Search - ncbi.nlm.nih.gov

Negative information for motif discovery
KT Takusagawa, D Gifford - Master’s project, Massachusetts Institute of Technology, …, 2003 - psrg.lcs.mit.edu
... GCR1 CTTTCC HAP2 CCAATNA HAP3 CCAATNA HAP4 CCAATNA HSF1 GAANNTTTCNNGAA INO2 ...
RMACCCANNCAYY REB1 CGGGTRR STE12 TGAAACA SWI4 CACGAAA SWI6 CACGAAA YAP1 TTACTAA ...
Cited by 3 - View as HTML - Web Search - helix-web.stanford.edu - www-smi.stanford.edu - ncbi.nlm.nih.gov - all 5 versions » - Get it from MIT Libraries

Stress-induced Gene Expression in Candida albicans: Absence of a General Stress Response
B Enjalbert, A Nantel, M Whiteway - Stress, 2003 - molbiolcell.org
... Yap1 and Skn7 control two specialized oxidative stress response regulons in yeast.
J. Biol. ... Molecular chaperones as HSF1-specific transcriptional repressors. ...
Cited by 30 - Web Search - bri.nrc-cnrc.gc.ca - irb-bri.cnrc-nrc.gc.ca - bri.nrc.gc.ca - all 12 versions »

NUCLEAR LOCALIZATION - Full text - MIT Libraries
WS Moye-Rowley - Eukaryot Cell, 2003 - pubmedcentral.nih.gov
... The DNA sequence of YAP1 indicated that the gene product shared sequence similarity
that was limited to the region of the bZip domain (58). ...
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The Saccharomyces cerevisiae Sko 1 p transcription factor mediates HOG pathway-dependent osmotic … - Full text - MIT Libraries
M Rep, M Proft, F Remize, M Tamas, R Serrano, JM … - Molecular Microbiology, 2001 - blackwell-synergy.com
... We describe a set of genes that are controlled by the Hog1p-Sko1p module
and also by oxidative stress in a Yap1-dependent manner. ...
Cited by 22 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Proteomik: Proteine im (Hefe-) Kontext
CCBFC CtIP - imb-jena.de
... MYO1 STP1 PDR1 RAS1 FKS1 TIM23 YDL076C CSE4 LYS9 YMR322C YMR071C TSP1 YBR103W YAP1
TEF4 SPP41 YLR238W YKL155C SWI3 NUP57 NYV1 SEC10 CCR4 YGR046W ADP1 SPT3 ...
View as HTML - Web Search - igtmv1.fzk.de - itgmv1.fzk.de - presse.fzk.de

Stress INDUCED GENE EXPRESSION IN Candida ALBICANS:
OF Absence - molbiolcell.org
... 1999. Yap1 and Skn7 control two specialized oxidative stress response regulons in
yeast. J Biol Chem. 274:16040-6. ... 1998. Molecular chaperones as HSF1-specific ...
Web Search

Protein-Protein-Interaktionen im Modell Hefe
P Proteininteraktionen - itgmv1.fzk.de
... STP1 PDR1 RAS1 FKS1 TIM23 YDL076C CSE4 LYS9 YMR322C YMR071C TSP1 YBR103W YAP1 TEF4
SPP41 YLR238W YKL155C SWI3 NUP57 NYV1 SEC10 CCR4 YGR046W ADP1 SPT3 YGL015C ...
Web Search - imb-jena.de - igtmv1.fzk.de

Stress-induced Gene Expression in Candida albicans: Absence of a General Stress Response D in Box - Full text - MIT Libraries
S Material, B Enjalbert, A Nantel, M Whiteway - Mol Biol Cell, 2003 - pubmedcentral.nih.gov
... Yap1 and Skn7 control two specialized oxidative stress response regulons in yeast. ...
Molecular chaperones as HSF1-specific transcriptional repressors. ...
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[CITATION] Fungal histidine kinases
JL Santos, K Shiozaki - Sci. STKE, 2001
... various transcription factors; these would include Mbp1 in cell cycle regulation,
Hsf1 in heat shock protein expression (38), and the Yap1 transcription factor ...
Cited by 8 - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

Combining pattern discovery and discriminant analysis to predict gene co-regulation - Full text - MIT Libraries
N Simonis, SJ Wodak, GN Cohen, J van Helden - Bioinformatics, 2004 - bioinformatics.oupjournals.org
Page 1. 1 Combining pattern discovery and discriminant analysis to predict gene
co-regulation Simonis, N. 1,* ,Wodak, SJ 1 , Cohen, GN 2 & van Helden, J. 1 ...
Cited by 7 - Web Search - cs.wayne.edu - ingentaconnect.com - ncbi.nlm.nih.gov - all 8 versions »

Identification and Characterization of an SKN7 Homologue in Cryptococcus neoformans
FL Wormley Jr, G Heinrich, JL Miller, JR Perfect, … - iai.asm.org
... Yeast YAP1 encodes a novel form of the jun family of transcriptional ... The Skn7 response
regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is ...
Web Search - iai.asm.org

Protein-Protein Interactions in the Yeast Model
P Uetz - cs.huji.ac.il
... STP1 PDR1 RAS1 FKS1 TIM23 YDL076C CSE4 LYS9 YMR322C YMR071C TSP1 YBR103W YAP1 TEF4
SPP41 YLR238W YKL155C SWI3 NUP57 NYV1 SEC10 CCR4 YGR046W ADP1 SPT3 YGL015C ...
View as HTML - Web Search - igtmv1.fzk.de - itgmv1.fzk.de

Parallel and comparative analysis of the proteome and transcriptome of sorbic acid- … - Full text - MIT Libraries
H de Nobel, L Lawrie, S Brul, F Klis, M Davis, H … - Yeast, 2001 - doi.wiley.com
Page 1. Research Article Parallel and comparative analysis of the proteome and
transcriptome of sorbic acid-stressed Saccharomyces cerevisiae ...
Cited by 25 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov

Complex Transcriptional Responses to Macromolecular Damaging Agents: Regulatory Responses Specific …
TJ BEGLEY, SA JELINSKY, LD SAMSON - Cold Spring Harbor Symposia on Quantitative Biology, 2000 - dx.doi.org
Page 1. Reactive chemicals that are prone to damaging cellular macromolecules
occur as common products of cellular metabolism, as ...
Cited by 1 - Web Search - cshl-symposium.org - cshl-symposium.org - ncbi.nlm.nih.gov - Get it from MIT Libraries

Discovery of Novel Transcription Control Relationships with Gene Regulatory Networks Generated from … - Full text - MIT Libraries
Y Tsurumi, J Kanagawa - DNA Research, 2003 - gene-networks.com
... RTG1 YFL052W CUP9 HSF1 CIN5 CAD1 CUP2 CHA4 HAL9 ... UGA3 LEU3 GAT1 MET28 SSN6 PIP2 INO4
ECM22 INO2 PDR1 SPS18 FLO8 YAP1 MSN2 MSN4 SWI6 SWI5 FZF1 DAL82 THI2 DST1
Cited by 5 - View as HTML - Web Search - dna-res.kazusa.or.jp - dna-res.kazusa.or.jp - ncbi.nlm.nih.gov - all 5 versions »

Whole-Genome Discovery of Transcription Factor Binding Sites by Network-Level Conservation - Full text - MIT Libraries
M Pritsker, YC Liu, MA Beer, S Tavazoie - Genome Research, 2003 - genome.org
... With the exception of the binding sites for CAD1, MCM1, MIG1, SUM1, YAP1, and ZAP1 ...
PAC, along with RAP1, GCN4, HSF1, SWI4, and CIN5 belongs to the next most ...
Cited by 12 - Web Search - bioinformatics.cs.vt.edu - statgen.ncsu.edu - mcb.mcgill.ca - all 14 versions »

Oxidative stress response in Paracoccidioides brasiliensis - Full text - MIT Libraries
EG Campos, RSA Jesuino, A da Silva Dantas, M de … - Genet. Mol. Res, 2005 - funpecrp.com.br
... and superoxide dismutase isoenzymes, peroxiredoxin, cytochrome c peroxidase, gluta-
thione synthesis enzymes, thioredoxin, and the transcription factors Yap1 ...
Web Search - funpecrp.com.br

Stress-induced transcriptional activation - Full text - MIT Libraries
WH Mager, AJJ De Kruijff - Microbiol. Rev, 1995 - mmbr.asm.org
Page 1. M ICROBIOLOGICAL R EVIEWS , Sept. 1995, p. 506–531 Vol. 59, No. 3
0146-0749/95/$04.00 0 Copyright 1995, American Society for Microbiology ...
Cited by 137 - Web Search - intl-mmbr.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Prediction of Transcription Factor Gene Expression in Saccharomyces cerevisiae
DF Simola - homepage.mac.com
... FKH2, GAL4, GAT1, GCN4, GCR1, GTS1, HAA1, HAP2, HAP4, HIR2, HMS1, HSF1, IME4, IXR1 ...
RTG1, SFP1, SKO1, SMP1, STE12, STP2, SUM1, SWI4, SWI5, THI2, YAP1, YAP3, YAP5 ...
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AP-1 transcriptional activity is regulated by a direct association between thioredoxin and Ref-1 - Full text - MIT Libraries
K Hirota, M Matsui, S Iwata, A Nishiyama, K Mori, … - Proc Natl Acad Sci USA, 1997 - dx.doi.org
Full Text of this Article. PDF Version of this Article. Similar articles found
in: PNAS Online ISI Web of Science PubMed. PubMed Citation. ...
Cited by 258 - Web Search - pnas.org - pubmedcentral.nih.gov - adsabs.harvard.edu - all 6 versions »

Discriminative Learning of Composite Transcriptional Regulatory Modules
T Naveh - cs.huji.ac.il
Page 1. Discriminative Learning of Composite Transcriptional Regulatory
Modules by Tomer Naveh Submitted to the School of Computer ...
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