Regulatory modules shared within gene classes as well as across gene classes can be detected by the … - Full text - MIT Libraries
A Klingenhoff, K Frech, T Werner - In Silico Biology, 2000 - bioinfo.de
... 4) similar to the functional NFkB/IRF1 module. ... binding sites in all mammalian muscle
actin promoter sequences differed only by one additional SRF binding site ...
Cited by 13 - Cached - Web Search - tbiomed.com - tbiomed.com - ncbi.nlm.nih.gov - all 6 versions »

Computational analysis of composite regulatory elements - Full text - MIT Libraries
P Qiu, W Ding, Y Jiang, JR Greene, L Wang - Mammalian Genome, 2002 - springerlink.com
... 22.0 FREAC7 SRY 302.5 BRN2 PBX1 82.0 P53 XBP1 36.4 CREL SRF 22.0 CREL GABP
276.3 IRF1 SRY 81.9 CREB USF 35.0 TATA YY1 21.6 CREBP1 ...
Cited by 10 - Web Search - ncbi.nlm.nih.gov

Bioinformatics of transcription control
T Werner - iubio.bio.indiana.edu
... NFkB p50 p65 IRF1 site site IRF1 High score / Low score Part One ... Tutorial regulatory
sequences USF +/- CAAT +/- SRF + TATA + INI + SP1 - 151 - 453 base pairs ...
View as HTML - Web Search - iubio.bio.indiana.edu

GEArray S Series Human Immunology Signaling Pathways Gene Array: AR-SAHS-605
FG Grouping, A Molecules, I ICAM, CS Molecules, C … - eurogentec.com
... NIP45), FOS, FOSL1, FOXO1A, FOXO3A, GATA3, GATA4, GRLF1, ICOS, IRF1, ISGF3G, JUN ...
MMP3, MST1, NPPB, NOS3, OAS1, ORM1, PIN1, SAA1, SFN, SLC2A4, SRF, TERT, YWHAZ. ...
View as HTML - Web Search - eurogentec.be

Predictive screening for regulators of conserved functional gene modules (gene batteries) in mammals - Full text - MIT Libraries
S Nelander, E Larsson, E Kristiansson, R Maansson, … - BMC Genomics, 2005 - biomedcentral.com
... The method identifies two more genes in this cluster, Myl9 and Lpp as potential
SRF targets in ... Significantly enriched motifs were Irf1/Irf2, NF-kappaB, and ISRE ...
Cached - Web Search - dx.doi.org - pubmedcentral.nih.gov - citebase.eprints.org - all 7 versions »

MatInspector and beyond: promoter analysis based on transcription factor binding sites - Full text - MIT Libraries
K Cartharius, K Frech, K Grote, B Klocke, M … - Bioinformatics, 2005 - bioinformatics.oxfordjournals.org
... both matches, but this does not mean that only IRF1 can bind ... Different colors denote
different transcription factor families (turquoise, SRF; pink, PAX5; blue ...
Web Search - bioinformatics.oupjournals.org - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

GEArray Q Series Mouse NF-kB Signaling Pathway Gene Array: AR-SAMM-016
FG Grouping, NFBR Genes, E Ligands, I Il1a, T … - eurogentec.be
... GM-CSF), Csf3 (G-CSF), Ifna1, Ifnb, Ifng, Il2, Il6, Il12a, Il12b, Irf1, Scya2, Tnf
(TNF ... C3 (C3 complement), Orm1 (Agp-1 B), Orm2, Saa1 (serum amyloid α1), Srf ...
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GEArray Q Series Mouse NFκB Signaling Pathway Gene Array
C No, K Size, FG Grouping, NFBR Genes, E Ligands, … - cosmobio.co.jp
... GM-CSF), Csf3 (G-CSF), Ifna1, Ifnb, Ifng, Il2, Il6, Il12a, Il12b, Irf1, Scya2, Tnf
(TNF ... C3 (C3 complement), Orm1 (Agp-1 B), Orm2, Saa1 (serum amyloid α1), Srf ...
View as HTML - Web Search - cosmobio.co.jp - superarray.com

GEArray Q Series Human NFkB Signaling Pathway Gene Array: AR-SAHS-016.2
FG Grouping, NFBR Genes, E Ligands, ILB IL1A, T … - eurogentec.be
... IL12B, IRF1, LTA (TNF-b), TNF (TNFa). Acute Phase Response Proteins: AGT
(angiotensinogen), BF, C3 (C3 complement), ORM1 (AGP1), SAA1 (serum amyloid A1), ...
View as HTML - Web Search - eurogentec.com

GEArray Q Series Human NFkB Signaling Pathway Gene Array Cat. No.* Kit Size HS-016-2/HS-016N-2 2 …
FG Grouping, NFBR Genes, E Ligands, ILB IL1A, T … - tebu-bio.com
... CSF3 (G-CSF), IFNA1, IFNB1, IFNG, IL2, IL6, IL8, IL12A, IL12B, IRF1, LTA (TNF-b ... BF,
C3 (C3 complement), ORM1 (AGP1), ORM2 (AGP2), SAA1 (serum amyloid A1), SRF ...
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GEArray Q Series Mouse NFkB Signaling Pathway Gene Array Cat. No.* Kit Size MM-016-2/MM-016N-2 2 …
FG Grouping, NFBR Genes, E Ligands, T Receptors, A … - tebu-bio.com
... GM-CSF), Csf3 (G-CSF), Ifna1, Ifnb, Ifng, Il2, Il6, Il12a, Il12b, Irf1, Scya2, Tnf
(TNF ... C3 (C3 complement), Orm1 (Agp-1 B), Orm2, Saa1 (serum amyloid α1), Srf ...
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GEArray S Series Mouse Autoimmune and Inflammatory Response Gene Array: AR-SAMM-602.3
FG Grouping, A Proteins, CS Receptors, ST Proteins … - eurogentec.com
... Elk1, Elk3, Fkbp1b, Fos, Fosb, Fosl1, Fosl2, Gata3, Gata4, Icos, Irf1, Jun, Junb ...
P300-ESTs, Raf1, Rel, Rela, Relb, Runx1, Runx2, Sp1, Sp3, Srf, Stat1, Stat4 ...
View as HTML - Web Search - eurogentec.be

GEArray S Series Human Autoimmune and Inflammatory Response Gene Array: AR-SAHS-602
FG Grouping, A Proteins, CS Receptors, ST Proteins … - eurogentec.be
... FLJ14639 (NIP45), FOS, FOSL1, FOSL2, FOXP3, GATA3, GATA4, GRLF1, ICOS, IRF1, JUN,
JUNB ... NFRKB, RAF1, REL, RELA, RELB, RUNX1, RUNX2, SP1, SP3, SRF, STAT1, STAT4 ...
View as HTML - Web Search - eurogentec.com

Identification and Functional Modelling of DNA Sequence Elements of Transcription
T Werner - Briefings in Bioinformatics, 2000 - ingentaconnect.com
... genes.The difference is an additional serum response factor (SRF) binding site ...
representing the spacer with the second box symbolizing the IRF1 binding site ...
Cited by 7 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

BMC Genomics - Full text - MIT Libraries
S Nelander, E Larsson, E Kristiansson, R Maansson, … - BMC Genomics, 2005 - biomedcentral.com
... 9: Cardiac muscle <2.5% 223 M00026:RSRFC4 <2.5% 144 M00152:SRF <2.5% 59
M00231:MEF-2 <2.5% 222 M00232:MEF-2 <2.5% 161 M00252:TATA <2.5% 259 M00418:TGIF, ...
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p65-NFkappaB synergizes with Notch to activate transcription by triggering cytoplasmic translocation … - Full text - MIT Libraries
L Espinosa, S Santos, J Ingles-Esteve, P Munoz- … - J Cell Sci, 2002 - jcs.biologists.org
... Xu et al., 1999 ), SMRT can also repress c-fos-, NF B-, SRF- (Lee et al ... Interestingly,
p65-NF B can synergize with IRF1 and ATF2/c-jun to activate transcription ...
Cited by 8 - Web Search - jcs.biologists.org - ncbi.nlm.nih.gov

A statistical analysis of the TRANSFAC database.
GB Fogel, DG Weekes, G Varga, ER Dow, AM Craven, … - Biosystems, 2005 - natural-selection.com
... Problem SRF C Serum responsive factor Core should be ATGG not CCWT ... RCCAA SRF
01 Serum response factor Core should be CCATATATGG not TATA ...
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ONCOGENOMICS - Full text - MIT Libraries
J Joseph, G Mudduluru, S Antony, S Vashistha, P … - Oncogene, 2004 - nature.com
... À4.972.7 — Y Y — — — — W17249 ELK3 ELK3, ETS-domain protein
(SRF accessory protein 2) À4.670.3 — Y Y — — — — ...
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UNCORRECTED PROOF
J Joseph, G Mudduluru, S Antony, S Vashistha, P … - Oncogene, 2004 - mcbl.iisc.ernet.in
... À4.972.7 — Y Y — — — — W17249 ELK3 ELK3, ETS-domain protein
(SRF accessory protein 2) À4.670.3 — Y Y — — — — ...
View as HTML - Web Search - eprints.iisc.ernet.in - Get it from MIT Libraries

Cryptic insertion producing twoNUP 98/NSD 1 chimeric transcripts in adult refractory anemia with an …
R La Starza, P Gorello, R Rosati, A Riezzo, A … - Genes Chromosomes and Cancer, 2004 - doi.wiley.com
... Probes for HEXB, IRF1, TCF7, and CSF1R gave a normal hybridization pattern in
98%–100 ... Brown J, Jawad M, Twigg SRF, Saracoglu K, Sauerbrey A, Thomas AE, Eils R ...
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oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes - Full text - MIT Libraries
SJH Sui, JR Mortimer, DJ Arenillas, J Brumm, CJ … - Nucleic Acids Research, 2005 - nar.oxfordjournals.org
... involved in the immune response that were identified in the NF- B test set (Irf1,
Irf2 and ... In this study, the Mef-2, SRF, c-REL, p50, p65, Myc–Max and c-Fos ...
Web Search - pubmedcentral.nih.gov - citebase.eprints.org - ncbi.nlm.nih.gov - all 5 versions »

Cryptic translocation t (5; 11)(q35; p15. 5) with involvement of the NSD1 and NUP98 genes without 5q …
C Panarello, C Rosanda, C Morerio - Genes Chromosomes Cancer, 2002 - doi.wiley.com
... RP11-729C24 5q31.1 IRF1 5/der(5) ... Genomics 66:26–34. Brown J, Jawad M, Twigg SRF,
Saracoglu K, Sauerbrey A, Thomas AE, Eils R, Harbott J, Kearney L. 2002. ...
Cited by 4 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

STAT proteins and transcriptional responses to extracellular signals - Full text - MIT Libraries
CM Horvath - Trends Biochem Sci, 2000 - chosun.ac.kr
... 3, 4–4, 5–5, 6–6 eg c-fos SIE FcγR GRR β -Cas PIE IRF1 GAS ... TFII-I also binds to the
serum-response factor (SRF) and DNA, potentially forming a scaffold ...
Cited by 93 - View as HTML - Web Search - ingentaconnect.com - ingentaconnect.com - ncbi.nlm.nih.gov

Transcription profile of cells infected with human T-cell leukemia virus type I compared with … - Full text - MIT Libraries
CA Pise-Masison, M Radonovich, R Mahieux, P … - Cancer Res, 2002 - intl-cancerres.aacrjournals.org
... of active transcription factors, causing activation of CREB, nuclear factor B, and
SRF. ... in HTLV-I-transformed cells, whereas the family members IRF1 and IRF3 ...
Cited by 10 - Web Search - cancerres.aacrjournals.org - peo.cshl.org - ncbi.nlm.nih.gov - all 5 versions »

pGL3 Luciferase Reporter Vectors
I Description, IIIP Components, IVC Methods, I … - promega.com
... Pdx-1 PAR RP58 Clox IRF1 Nkx2.5 Tal-1a GBF3 AD-b OBF1 FOXC1 Brn-3 Cdx-2 GBF1 NUDR
TCF/LEF1 CDF1 AP1 MIT/TFE Runt-2 ... v-Myb NF-kB SRF E2F PAX9 RFX1 Cone-rod ...
Web Search - genomics.sbg.ac.at - sci.sdsu.edu - shpromega.cn - all 8 versions »

Regulation of the expression of inducible nitric oxide synthase
H Kleinert, PM Schwarz, U Foerstermann - Biol. Chem, 2003 - degruyter.com
... PARP –/– - or IRF1 –/– mice, see below ... ARE, C/EBP, c-ETS-1, CREB, GATA, HIF, HSF,
IRF-1, NF-1, NFAT, NF-κB, NF-IL6, Oct-1, PEA3, p53, Sp1, SRF and STAT ...
Cited by 12 - Web Search - extenza-eps.com - degruyter.de - all 9 versions »

Arole for casein kinase II phosphorylation in the regulation of IRF-1 transcriptional activity
R Lin, J Hiscott - Molecular and Cellular Biochemistry, 1999 - springerlink.com
... The arrows indicate the positions IRF- 1(150), IRF- 1 (FL) and IRF1(250). ... factors
including c-ErbA, adenovirus ElA, HPVE7, C-Myb, Fos, CREB/ATF, p53, SRF, and c ...
Cited by 21 - Web Search - kluweronline.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

Luciferase Reporters: Less is More
A Paguio, B Almond, F Fan, P Stecha, D Garvin, M … - promega.com
... PAR RP58 Clox IRF1 Nkx2.5 Tal-1a GBF3 AD-b OBF1 FOXC1 Brn-3 Cdx-2 GBF1 NUDR
TCF/LEF1 CDF1 AP1 MIT/TFE ... Neu1/3 Nkx2.5 RFX1 TCF v-Myb NF-kB SRF E2F PAX9 RFX1 ...
Web Search

A composite DNA element in the promoter of the polymeric immunoglobulin receptor regulates its … - Full text - MIT Libraries
FE Johansen, BA Bosloeven, P Krajci, P Brandtzaeg - European Journal of Immunology, 1998 - doi.wiley.com
... response element (ISRE), whereas binding of interferon-regulated factor 1 (IRF1)
to a ... the regulation of serum response element activ- ity by p67 SRF and p62 ...
Cited by 15 - Web Search - ncbi.nlm.nih.gov

Promotoranalyse des gehirnspezifisch exprimierten Gens 83.5
DIS Perl - elib.tu-darmstadt.de
Page 1. Promotoranalyse des gehirnspezifisch exprimierten Gens 83.5 Vom
Fachbereich Chemie der Technischen Universität Darmstadt ...
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Research Paper
R Papoian, A Scherer, M Saulnier, F Staedtler, A … - springerlink.com
Page 1. : Research Paper VeloceGenomics: An Accelerated in Vivo Drug Discovery
Approach to Rapidly Predict the Biologic, Drug-Like ...
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ERK1/2 and MEK1/2 Induced by Kaposi's Sarcoma-Associated Herpesvirus (Human Herpesvirus 8) Early … - Full text - MIT Libraries
N Sharma-Walia, HH Krishnan, PP Naranatt, L Zeng, … - J. Virol, 2005 - jvi.asm.org
JVI Home Help [Feedback] [For Subscribers] [Archive] [Search] [Contents]
Institution: Google Indexer Sign In as Member ...
Cited by 1 - Web Search - jvi.asm.org

The granulocytic inducer C/EBP a inactivates the myeloid master regulator PU. 1: possible role in …
AMK und Poliklinik, III am Klinikum Grosshadern - edoc.ub.uni-muenchen.de
Page 1. Aus der Medizinischen Klinik und Poliklinik III am Klinikum Großhadern
der Universität München, Vorstand: Prof. Dr. med. W. Hiddemann ...
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Relationship between G+ C in silent sites of codons and amino acid composition of human proteins
DW Collins, TH Jukes - Journal of Molecular Evolution, 1993 - springerlink.com
Page 1. J Mol Evol (1993) 36:201-213 Journal of IVlolecular Evolution ©
Springer-Verlag New York Inc. 1993 Relationship Between ...
Cited by 18 - Web Search - ncbi.nlm.nih.gov - csa.com - Get it from MIT Libraries

Decisiones en los macrofagos: proliferar, activarse o morir
MC Vila, UB Universidad - tdx.cesca.es
... xxii SRE, elemento de respuesta al suero SRF, factor de respuesta al suero STAT,
signal transducer and activator of transcription TAK, TGF-β-activated kinase ...
View as HTML - Web Search - tdx.cbuc.es - tdcat.cesca.es - tdx.cesca.es