Predicted common structural features of DNA-binding domains from Ets, Myb and HMG transcription … - Full text - MIT Libraries
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Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis … - Full text - MIT Libraries
K Hosoda, A Imamura, E Katoh, T Hatta, M Tachiki, … - Plant Cell, 2002 - plantcell.org
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… and spermatid cell lines by transcription factor binding to SRY (sex-determining region Y), CAAT … - Full text - MIT Libraries
LS MORRISON, AR PIEROTTI - Biochem. J, 2003 - biochemj.org
... Spermatid Cell Lines by Transcription Factor Binding to SRY, CAAT and CREB ...
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Cloning and Characterization of Human eIF 4 E Genes - Full text - MIT Libraries
M Gao, W Rychlik, RE Rhoads - J Biol Chem, 1998 - jbc.org
... 49). Other consensus motifs within this region include GATA1, AP1, AP4, GFI1,
NF- B, STAT, c-Myb, SRY, SREBP1, and HFH2 (Fig. 2). The ...
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Computational analysis of composite regulatory elements - Full text - MIT Libraries
P Qiu, W Ding, Y Jiang, JR Greene, L Wang - Mammalian Genome, 2002 - springerlink.com
... HFH3 SRY 22116.5 MYOD SREBP1 178.9 CREB SREBP1 61.5 HLF Oct-1 29.3 ... AHRARNT
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Subject Index to Volume 44 - Full text - MIT Libraries
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Genomic Mechanisms of p210 BCR-ABL Signaling - Full text - MIT Libraries
S Ray, Y Lu, SH Kaufmann, WC Gustafson, JE Karp, I … - J. Biol. Chem, 2004 - jbc.org
... PRPF4B, serine/threonine-protein kinase PRP4h; LIM, similar to rat protein kinase
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An alternative pathway for expression of p 56 lck from type I promoter transcripts in colon … - Full text - MIT Libraries
S McCracken, CS Kim, Y Xu, M Minden, NG Miyamoto - Oncogene, 1997 - nature.com
... SW620 and Colo201 cells, transcriptional activation by c-Myb, which is expressed
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Genomic organization and transcription units of the human acyl-CoA synthetase 3 gene - Full text - MIT Libraries
H Minekura, MJ Kang, Y Inagaki, H Suzuki, H Sato, … - Gene, 2001 - ingentaconnect.com
... Sequence inspection of the 5'-flanking region revealed potential DNA elements including
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Genomic Mechanisms of p210
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Page 1. Genomic Mechanisms of p210 BCR-ABL Signaling INDUCTION OF HEAT
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Functional analysis of the OCA-B promoter - Full text - MIT Libraries
S Stevens, L Wang, RG Roeder - J. Immunol, 2000 - jimmunol.org
... consensus binding sites. Further upstream, there are strong matches to binding
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Supplementary data Table I.
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Extinction of expression of the genes encoding haematopoietic cell-restricted transcription factors … - Full text - MIT Libraries
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... M, Oosterwegel M, van Norren K, Clevers H. Sox-4, an Sry-like HMG box ... c-Myb and
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Appendix: Finding nuclear localization signals
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... KRPMNAFIVWSRDQRRK SRY Sudbeck and Scherer, 1997. PRRRK SRY Sudbeck and Scherer,
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Regulation der BOB. 1/OBF. 1-Expression und der BOB. 1/OBF. 1-Proteinstabilitaet
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The promoter region of the human BUBR1 gene and its expression analysis in lung cancer
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Wnt-4 regulation by the Wilms' tumour suppressor gene, WT 1 - Full text - MIT Libraries
EUH Sim, A Smith, E Szilagi, F Rae, P Ioannou, MH … - Oncogene, 2002 - nature.com
... GATA 1 GATA 2 Sox9 Sox11 EGR-1 c-myb c-myc N-myc FosB c fos ... Of note was the presence
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TRF 1 is a dimer and bends telomeric DNA - Full text - MIT Libraries
A Bianchi, S Smith, L Chong, P Elias, T de Lange - The EMBO Journal, 1997 - embojournal.npgjournals.com
... Cloning of Drosophila transcription factor Adf-1 reveals homology to Myb oncoproteins ...
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Systematic multiplex polymerase chain reaction and reverse transcription-polymerase chain reaction … - Full text - MIT Libraries
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... system: ABL1, ELK1, ERBB2, FOS1, HRAS, KIT, KRAS2, MYB, MYC, MYCN, NRAS, RAF1 proto ...
ATRX and NSBP1 X chromosome-linked genes and RBMY2B, SRY, and TSPY Y ...
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Content analysis of the core promoter region of human genes - Full text - MIT Libraries
VB Bajic, V Choudhary, CK Hock - Silico Biol, 2004 - iospress.metapress.com
... 1 C/EBP" 22 84.62 96 0.9886 −1 SRY" 22 84.62 40 0.8789 +1 C/EBPalpha" 21 80.77
28 1.6675 ... 1 AP-4" 28 23.73 54 6.7526 −1 MYB" 17 14.41 18 4.8585 ...
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The chicken telomerase RNA gene: conservation of sequence, regulatory elements and synteny among … - Full text - MIT Libraries
ME Delany, LM Daniels, FTC Alert - Cytogenetic and Genome Research, 2003 - content.karger.com
... 7 c-Myb 2 -396, -316 1 -314 2 -386, -282 4 -590, -586, -378, -134 0 ... 107 SRY
beta 1 -351 f 1 -349 f 0 0 1 -193 f MCBF 0 0 0 1 -347 0 ...
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Binding of A/T-rich DNA by three high mobility group-like domains in c-Abl tyrosine kinase. - Full text - MIT Libraries
YJ Miao, JY Wang - J Biol Chem, 1996 - jbc.org
... of DNA binding (6). Several other DNA-binding proteins, such as Myc and Myb, have
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TRANSFAC (R): transcriptional regulation, from patterns to profiles - Full text - MIT Libraries
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... GENE table, for example for the human and mouse genes encoding transcription factors
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AtTBP 2 and AtTRP 2 in Arabidopsis encode proteins that bind plant telomeric DNA and induce DNA … - Full text - MIT Libraries
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... AtTRP2. Keywords Arabidopsis thaliana Æ Telomere Æ Telomeric DNA-binding
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Identification of expressed genes by laser-mediated manipulation of single cells - Full text - MIT Libraries
K Schueitze, G Lahr - Nature Biotechnology, 1998 - nature.com
... Regional chromosomal localization of N-ras- K-ras-1, K-ras-2 and myb oncogenes in
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Analysis of the human TATA binding protein promoter and identification of an ets site critical for … - Full text - MIT Libraries
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The tricho-rhino-phalangeal syndromes: frequency and parental origin of 8 q deletions - Full text - MIT Libraries
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... D (1983) The human DNA locus related to the onco- gene myb of avian ... and campomelic
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Molecular Analysis of Human Papillomavirus Type 52 Isolates Detected in the Genital Tract of Human … - Full text - MIT Libraries
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... Putative binding sites for cellular proteins SRY, c-Myb, and others were also affected
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Neutral Evolution of the Non-binding Region of the Anthocyanin Regulatory Gene Ipmyb1 in Ipomoea. - Full text - MIT Libraries
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... 2 RUNNING HEAD: Evolution of Anthocyanin myb Regulator KEY WORDS: Anthocyanin, neutral
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Long-chain-fatty-acid CoA ligases: the key to fatty acid activation, formation of xenobiotic acyl- …
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The mouse homolog of Drosophila Vasa is required for the development of male germ cells - Full text - MIT Libraries
SS Tanaka, Y Toyooka, R Akasu, Y Katoh-Fukui, Y … - Genes Dev, 2000 - genesdev.org
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A statistical analysis of the TRANSFAC database.
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... Ets-like transcription factor identified in lymphoid B-cells S8 01 S8 SOX9 B1 SOX
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Activation of the human PAX6 gene through the exon 1 enhancer by transcription factors SEF and Sp1 - Full text - MIT Libraries
JB Zheng, YH Zhou, T Maity, WS Liao, GF Saunders - Nucleic Acids Res, 2001 - nar.oupjournals.org
... potential transcription factor binding sites for AP1, AP2, AP4, Sp1, c-Myb,
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DNA microarray analyses of genes regulated during the differentiation of embryonic stem cells
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1 protein; (Hoxa-1; Hox-1.6) 5.5 (2.5–10.9) M22115 Sox 4; SRY-box con ...
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Cancer-associated alternative usage of multiple promoters of human GalCer sulfotransferase gene - Full text - MIT Libraries
M Tsuda, M Egashira, N Niikawa, Y Wada, K Honke - European Journal of Biochemistry, 2000 - ejbiochem.org
... consensus binding sites for the transcription factors Sp1, MyoD, Lmo2, MZF-1,
v-Myb, Ik-2 ... As for exon 1d, Lmo2, EF1, MyoD, Sp1, SRY, HFH-2, Nkx-2.5 and Ik-2 ...
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Novel transcription factors in human CD34 antigen-positive hematopoietic cells - Full text - MIT Libraries
I Gomes, TT Sharma, S Edassery, N Fulton, BG Mar, … - Blood, 2002 - bloodjournal.org
Page 1. HEMATOPOIESIS Novel transcription factors in human CD34 antigen–positive
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EUKARYOTIC TRANSCRIPTION FACTOR-DNA COMPLEXES - Full text - MIT Libraries
G Patikoglou, SK Burley - Annual Review of Biophysics and Biomolecular Structure, 1997 - biophys.annualreviews.org
... Like TBP, both SRY and LEF-1 make additional side chain-minor groove base edge
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Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway - Full text - MIT Libraries
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... The sec- ond class, the C family, consists of genes that encode proteins containing
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Clustering of DNA Sequences in Human Promoters - Full text - MIT Libraries
PC FitzGerald, A Shlyakhtenko, AA Mir, C Vinson - Genome Research, 2004 - genome.org
... TRANSFAC database that are underrepre- sented near the TSS, SRY (WWAACAAWA), and
LYF1 (TTTGGGAGR; Ikaros; A); and uniformly distributed, Myb (AACKGNC), HSF2 ...
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BMC Genomics - Full text - MIT Libraries
J Besco, A Frostholm, MC Popesco, AHM Burghes, A … - BMC Genomics, 2001 - biomedcentral.com
Page 1. ...
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A novel computational approach for the prediction of networked transcription factors of Ah-receptor … - Full text - MIT Libraries
A Kel, S Reymann, V Matys, P Nettesheim, E … - Molecular Pharmacology, 2004 - molpharm.aspetjournals.org
... HNF1/Sp1 and AP-1/NF-1 for the max. distance R=100bp; E2F/NF-1, AhR/Myb,
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Ethidium Bromide Provides a Simple Tool for Identifying Genuine DNA-Independent Associations - Full text - MIT Libraries
J Lai, W Herr - Proceedings of the National Academy of Sciences - pnas.org
... Buggs, N. Nasrin, A. Mode, P. Tollet, HF Zhao, JA Gustafsson, and M. Alexander-Bridges
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Essential role of citron kinase in cytokinesis of spermatogenic precursors - Full text - MIT Libraries
F Di Cunto, S Imarisio, P Camera, C Boitani, F … - J Cell Sci, 2002 - jcs.biologists.org
... sex of 12.5-day-old (E12.5) embryos was determined by PCR with SRY-specific
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Structure-based prediction of DNA target sites by regulatory proteins - Full text - MIT Libraries
H Kono, A Sarai - Proteins Structure Function and Genetics, 1999 - doi.wiley.com
... 1HMI HIV-1 reverse transcriptase 3.0 1HRY Human SRY NMR 1IHF IHF 2.5 1KLN DNApolymerase
I 3.2 ... 1MHT HhaI methyltransferase 2.8 1MSE Myb NMR 1NFKa NF- B p50 2.3 ...
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Microarray analysis of gene expression in human donor sclera - Full text - MIT Libraries
TL Young, GS Scavello, PC Paluru, JD Choi, EF … - Mol Vis, 2004 - molvis.org
... 1 (Drosophila) NM_032998 death effector domain containing DEDD 1q23.1 NM_003472
DEK oncogene (DNA binding) DEK 6p23 NM_021145 cyclin D binding myb-like DMTF1 ...
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Transcription Factors
S Veeraraghavan - www-bmb.med.uth.tmc.edu
... Some other proteins of this family: MYB, Winged-helix proteins, CAP-like proteins,
POU domains, Paired domains, ARID (SWI-SNF family). ... HMG-box proteins SRY and ...
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Large scale molecular analysis identifies genes with altered expression in salivary adenoid cystic … - Full text - MIT Libraries
HF Frierson, AK El-Naggar, JB Welsh, LM Sapinoso, … - Am J Pathol, 2002 - ajp.amjpathol.org
... 33131_at SOX4 SRY (sex determining region Y)-box 4 NM_003107 Hs.83484 6.92E-07 ... to
the other car- cinomas included versican, TGF- type III receptor, and c-myb. ...
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Structural organization and classification of the human mucin genes
N Moniaux, F Escande, N Porchet, JP Aubert, SK … - Front Biosci, 2001 - xylian.igh.cnrs.fr
... Myb, and MZF1), elements responsible for the transcription in immunospecific cells
(AML-1, Gfi-1, Ikaros, IL-6 RE, LyF1, NF-GMCSF, NF-mu-E1, NF-Y, Pu-box, SRY, ...
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Changes in gene expression profiles of multiple myeloma cells induced by arsenic trioxide(ATO): … - Full text - MIT Libraries
P Zhou, N Kalakonda, RL Comenzo - British Journal of Haematology, 2005 - ingentaconnect.com
... by 1,25-dihydroxyvitamin D-3 )2Æ43 0Æ24 213906 v-myb avian myeloblastosis ... Protein
kinase C, beta 1 (PRKCB1) )4Æ6 0Æ68 201417 SOX4 for SRY (sex determining ...
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Mitf from neural crest to melanoma: signal transduction and transcription in the melanocyte lineage
CR Goding - Signal Transduction, 2000 - genesdev.org
... these proteins are related to the sex-determining factor SRY and are ... for many
transcription factors, including the nuclear hormone receptors, Myb and CREB (for ...
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