Stress-induced transcriptional activation mediated by YAP1 and YAP2 genes that encode the Jun family …
KY Dai Hirata, T Miyakawa - Mol Gen Genet, 1994 - springerlink.com
... ARE-dependent transcriptional activator as has been demonstrated for YAP1
(Moye-Rowley ... 3). The rela- tive fi-galactosidase activity in the yapl disruptant ...
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A Key to a Door - Full text - MIT Libraries
A Kaffman, EK O’Shea - Annu. Rev. Cell Dev. Biol, 1999 - cellbio.annualreviews.org
... et al 1997 Exportins Los1 Transfer RNA Hellmuth et al 1998 Crm1/Xpo1 Leucine-rich
nuclear Kuge et al 1998, Stade et al 1997, export signal, yAP1 Yan et al 1998 ...
Cited by 139 - Web Search - cellbio.annualreviews.org - ncbi.nlm.nih.gov

A novel, transformation-relevant activation domain in Fos proteins - Full text - MIT Libraries
M Funk, B Poensgen, W Graulich, V Jerome, R Muller - Mol Cell Biol, 1997 - mcb.asm.org
... and PpuMI sites of the URA3 gene, which was used to replace the YAP1 gene ... is able
to trans- activate in a context-independent manner (40% activity rela- tive to ...
Cited by 7 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

in Saccharomyces cerevisiae - Full text - MIT Libraries
C Charizanis, H Juhnke, B Krems, KD Entian - Mol Gen Genet, 1999 - springerlink.com
... Two major transcription factors are in- volved in this induction, Pos9/Skn7 and
Yap1. ... Key words Oxidative stress á Protein kinase A á Msn2 á Pos9 á Yap1 ...
Cited by 17 - Web Search - springerlink.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Stress-activated signalling pathways in yeast - Full text - MIT Libraries
WM Toone, N Jones - Genes to Cells, 1998 - blackwell-synergy.com
... A closer homologue to Pap1 is the budding yeast yAP1 factor that not only shares
considerable sequence similarity within the DNA binding region but also within ...
Cited by 44 - Web Search - genestocellsonline.org - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

Discovery of Novel Transcription Control Relationships with Gene Regulatory Networks Generated from … - Full text - MIT Libraries
Y Tsurumi, J Kanagawa - DNA Research, 2003 - gene-networks.com
... Figure 2 shows the control rela- tionships among classified transcription factors
in the network. ... PIP2 INO4 ECM22 INO2 PDR1 SPS18 FLO8 YAP1 MSN2 MSN4 SWI6 SWI5 ...
Cited by 5 - View as HTML - Web Search - dna-res.kazusa.or.jp - dna-res.kazusa.or.jp - ncbi.nlm.nih.gov - all 5 versions »

Polyubiquitin gene expression contributes to oxidative stress resistance in respiratory yeast ( …
L Cheng, R Watt, PW Piper - Mol. Gen. Genet, 1994 - springerlink.com
... 3), yet has rela- tively little influence on the H202 sensitivity of glucose- repressed ...
615-618 Schnell N, Krems B, Entian KD (1992) The PAR1 (YAP1/SNQ1) gene ...
Cited by 28 - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

in Schizosaccharomyces pombe
Z Benko, C Fenyvesvolgyi, M Pesti, M Sipiczki - springerlink.com
... Phylogenetic rela- tionships were calculated with the protein distance matrix ... that
is conserved in the related AP-1-like proteins Pdr4/Yap1 (Gounalaki and ...
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Saccharomyces cerevisiae Glutaredoxin 5-deficient Cells Subjected to Continuous Oxidizing Conditions …
G Bellı, MM Molina, J Garcıan, JE Perez-Ortın, … - scsie.uv.es
... by external agents and exhibit increased protein oxidation in rela- tion to ... 5). Two
transcriptional regulators that respond to oxidative stress, Yap1 and Skn7 ...
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Forum Review
Signal - dx.doi.org
... to adjust the protein activity of the oxidative stress transcription factors Yap1
and OxyR ... as the transfer messenger RNA ssrA and the ppGpp synthetase RelA (52 ...
Cited by 15 - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

High-throughput phenotypic proWling of gene–environment interactions by quantitative growth curve … - Full text - MIT Libraries
A Weiss, J Delproposto, CN Giroux - Analytical Biochemistry, 2004 - bionewsonline.com
... Phenotypic proWling of the oxidative stress response of a yap1 mutant strain ... However,
the performance of individual cell-based assays is rela- tively slow and ...
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BIOINFORMATICS - Full text - MIT Libraries
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - BIOINFORMATICS, 2004 - bioinformatics.oupjournals.org
Page 1. VOLUME 20 SUPPLEMENT 1 4 AUGUST 2004 PAGES i232–i240 BIOINFORMATICS
Electronic edition http://bioinformatics.oupjournals.org ...
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Function of a Plant Stress-Induced Gene, HVA22. Synthetic Enhancement Screen with Its Yeast Homolog … - Full text - MIT Libraries
A Brands, TH Ho - Plant Physiol, 2002 - plantphysiol.org
... leu2/leu2 can1/can1 ABY14 MATa ade2 ura3 his3 trp1 leu2 can1 yap1 HIS3 ... Synthetic
enhancement indicates a functional rela- tionship between two gene products. ...
Cited by 4 - Web Search - intl.plantphysiol.org - pubmedcentral.nih.gov - dx.doi.org - all 7 versions »

Mutations in WSC genes for putative stress receptors result in sensitivity to multiple stress … - Full text - MIT Libraries
T Zu, J Verna, R Ballester - Mol. Genet. Genomics, 2001 - springerlink.com
... 1997). YAP1 was deleted in the strain TZwt-1 (MATa leu2 his3 ura3 trp1 ade8,
this study) as described previously (Wu et al. 1993). ...
Cited by 14 - Web Search - ncbi.nlm.nih.gov

GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
M Cornell, NW Paton, S Wu, CA Goble, CJ Miller, P … - BIBE, 2001 - ieeexplore.ieee.org
... experiments involving deletion of the TUP1 gene, over-expression of YAP1, sporulation,
and ... equivalent to being 50% up-regulated) in tup1 ¡ cells rela- tive to ...
Cited by 13 - Web Search - doi.ieeecs.org - doi.ieeecomputersociety.org - cs.man.ac.uk - all 7 versions »

A Comparison of Various Control Structures
ZQ Wang, S Skogestad, Y Zhao - ieeexplore.ieee.org
... concentration). Finally we must point out that, if the output function
involves control input D, the rela- tive degree is zero. ...
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Prediction of regulatory networks: genome-wide identification of transcription factor targets from … - Full text - MIT Libraries
J Qian, J Lin, NM Luscombe, H Yu, M Gerstein - Bioinformatics, 2003 - bioinformatics.oupjournals.org
... The imbalance problem also has implications for the rela- tionships between threshold,
coverage and error rate. ... SOK2 194 GLN3 11 YAP1 189 YAP3 11 ...
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Systematic functional analysis of the yeast genome
SG Oliver, MK Winson, DB Kell, F Baganz - Trends in Biotechnology, 1998 - statgen.ncsu.edu
... co-repressor Tup1p or overex- pression of the transcriptional activator gene YAP1. ...
approach is the measurement of the change in the rela- tive concentrations ...
Cited by 86 - View as HTML - Web Search - personalpages.umist.ac.uk - ingentaconnect.com - all 8 versions »

Signalling Stress in Yeast
JC Igual, F Estruch - Food Technol Biotechnol, 2000 - jagor.srce.hr
... Thus, the transcrip- tion factor Yap1 is regulated at the level of cellular local ...
The rela- tionship between the TOR and the Ras/PKA pathway in controlling the ...
Cited by 1 - View as HTML - Web Search - pubwww.srce.hr - public.srce.hr - jagor.srce.hr - all 5 versions »

Crystallisation and moisture sorption properties of selected Australian unifloral honeys
L Yao, BR Bhandari, N Datta, R Singanusong, BR D' … - Journal of the Science of Food and Agriculture, 2003 - doi.wiley.com
... This behaviour will be affected principally by the rela- tive humidity of
the air. ... Absorbance Yap1 Yap2 Yap3 Yap4 T/T1 T/T2 T/T3 T/T4 ...
Web Search - csa.com

Annual Review of Cell and Developmental Biology - Full text - MIT Libraries
A Kaffman, EK O'Shea - Annual Review of Cell and Developmental Biology, 1999 - cellbio.annualreviews.org
Annual Reviews tagline graphic, ...
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Inferring gene regulatory relationships by combining target-target pattern recognition and regulator … - Full text - MIT Libraries
H Wei, Y Kaznessis - Biotechnology and Bioengineering, 2005 - doi.wiley.com
... which one is the target; (3) these approaches can detect only limited regulatory
rela- tionships due ... YAP1 YJR148W, YDR304C, YPL091W, YGR234W, YBR054W, YLL049W ...
Cited by 1 - Web Search - cems.umn.edu - cems.umn.edu - ncbi.nlm.nih.gov - all 5 versions »

Mutational analysis of RsrA, a zinc-binding anti-sigma factor with a thiol-disulphide redox switch - Full text - MIT Libraries
MSB Paget, JB Bae, MY Hahn, W Li, C Kleanthous, JH … - Molecular Microbiology, 2001 - blackwell-synergy.com
... increased and now includes, in addition to RsrA and OxyR, the transcriptional
activators FLP in Lactobacillus casei ( Gostick et al., 1998) and Yap1 in yeast ...
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[BOOK] Molecular Biology and Genetic Engineering of Yeasts
H Heslot, C Gaillardin - 1991 - print.google.com
... 136 a. yAP1 136 b. HSF 137 5. Complex Activators and HAP 2/3/4 Trimers
138 B. Interactions of Regulatory Proteins . . . . . ...
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Functional analysis of multiple AUG codons in the transcripts of the STA2 glucoamylase gene from … - Full text - MIT Libraries
MA Vivier, P Sollitti, IS Pretorius - Mol. Gen. Genet, 1999 - springerlink.com
... 1998). By analyzing the uORFs present in transcripts of the YAP1 and YAP2 genes ... We
attempted to elucidate the structure/function rela- tionships of the multiple ...
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Signals mediating nuclear targeting and their regulation: Application in drug delivery
DA Jans, CK Chan, S Huebner - Medicinal Research Reviews, 1998 - doi.wiley.com
Page 1. Signals Mediating Nuclear Targeting and Their Regulation: Application
in Drug Delivery David A. Jans, Chee Kai Chan, Stefan Huebner ...
Cited by 28 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

Number 1/numero
C Van Themsche, M Jacob, C Salesse, BJ Thatcher, … - proceedings.nrc.ca
... Bouganim, Jocelyn David, Robert Wysocki, and Dindial Ramotar Yap1 overproduction
restores ... Yang and Edward E. Ishiguro Dimerization of the RelA protein of ...
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Non-small-cell lung cancer molecular signatures recapitulate lung developmental pathways - Full text - MIT Libraries
AC Borczuk, L Gorenstein, KL Walter, AA Assaad, L … - Am J Pathol, 2003 - ajp.amjpathol.org
Page 1. Non-Small-Cell Lung Cancer Molecular Signatures Recapitulate Lung
Developmental Pathways Alain C. Borczuk,* Lyall Gorenstein ...
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PhD Dissertation Learning from SAGE Data
T Chu - phil.cmu.edu
... terns from populations sharing same set of conditional independence rela- tions
among observed variables. ... 17 Fhl1 Fap1 Yap1 RPS 22A RPS 21B RPL 16A RPL 2B ...
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Response to different environmental stress conditions of industrial and laboratory Saccharomyces … - Full text - MIT Libraries
A Garay-Arroyo, AA Covarrubias, I Clark, I Nino, G … - Applied Microbiology and Biotechnology, 2004 - springerlink.com
... rate, c specific ethanol produc- tion rate (q Et-OH ), and d rela- tionship between ...
Lagniel G, Spector D, Garin J, Labarre J, Toledano MB (1999) Yap1 and Skn7 ...
Cited by 1 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - csa.com

Cyclic adenosine 3', 5'-monophosphate response element binding protein (CREB) and related … - Full text - MIT Libraries
TE Meyer, JF Habener - Endocr Rev, 1993 - edrv.endojournals.org
... to Page 6. 274 MEYER AND HABENER Vol. 14, No. 3 DBP TEF E4BP4 LAP -1
hXBP-1. TREB5 Yap1 ATF4 %tB 1 CREMla ’ CREMlb : ATF-1 :: HBP ...
Cited by 122 - Web Search - ncbi.nlm.nih.gov

Analysis of genomic and proteomic data using advanced literature mining - Full text - MIT Libraries
Y Hu, LM Hines, H Weng, D Zuo, M Rivera, A … - J Proteome Res, 2003 - canis.uiuc.edu
... These methods included chi-square analysis, Fisher’s exact probabilities, rela-
tive risk of gene, and relative risk of disease 16 (http:// ...
Cited by 15 - View as HTML - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Genome-wide analysis of Kluyveromyces lactis in wild-type and rag2 mutant strains
M Becerra, N Tarrio, MI Gonzalez-Siso, ME Cerdan - Genome, 2004 - article.pubs.nrc-cnrc.gc.ca
... Figure 1D shows the rela- tive levels of expression of the glutamate ... in- volved in
the oxidative stress response, the transcriptional factor Yap1 (Billard et al ...
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Coulomb Interference in High-Energy Scattering - Full text - MIT Libraries
GB West, DR Yennie - Physical Review, 1968 - link.aps.org
... by Lindenbaum and his co-workers,' to verify experimentally the forward dispersion
rela- tions for ... of the p and ,y, is the -yp coupling constant ['yaP1-47rX 2.5 ...
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Saccharomyces cerevisiae - Full text - MIT Libraries
DA Sinclair, SP Hong, IW Dawes - Molecular Microbiology, 1996 - blackwell-synergy.com
... In the latter case, the enzyme activities were greater than may have been expected
from the rela- tive transcript levels, perhaps because of differences in post ...
Cited by 10 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

A Review of Phenotypes in Saccharomyces cerevisiae - Full text - MIT Libraries
M Hampsey - Yeast, 1997 - doi.wiley.com
Page 1. YEAST VOL. 13: 1099–1133 (1997) A Review of Phenotypes in
Saccharomyces cerevisiae MICHAEL HAMPSEY 1 * 1 Department of ...
Cited by 80 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov

Beyond Transcription—New Mechanisms for the Regulation of Molecular Chaperones - Full text - MIT Libraries
J Winter, U Jakob - Critical Reviews in Biochemistry and Molecular Biology, 2004 - dx.doi.org
... have in common the presence of oxidation-sensitive thiol groups, which are reversibly
oxidized to either form disulfide bonds (eg, OxyR, Yap1, RsrA) (Aslund et ...
Web Search - crbmb.com - taylorandfrancis.metapress.com - ingentaconnect.com - all 6 versions »

Cytosolic Thioredoxin Peroxidase I and II Are Important Defenses of Yeast against Organic … - Full text - MIT Libraries
DC Munhoz, LES Netto - J. Biol. Chem, 2004 - jbc.org
Page 1. Cytosolic Thioredoxin Peroxidase I and II Are Important Defenses
of Yeast against Organic Hydroperoxide Insult CATALASES ...
Web Search - jbc.org - ncbi.nlm.nih.gov

Oxidative Stress and Mechanisms of Protection Against It in Bacteria
VI Lushchak - BIOCHEMISTRY (Moscow), 2001 - kluweronline.com
Page 1. GENERAL CONCEPTS OF OXIDATIVE STRESS THEORY Oxygen is essential for
most living organisms and, with the exception of a rather ...
Cited by 3 - Web Search - springerlink.com - ncbi.nlm.nih.gov - maik.ru - Get it from MIT Libraries

Oxidative stress: molecular perception and transduction of signals triggering antioxidant gene … - Full text - MIT Libraries
JG Scandalios - Brazilian Journal of Medical and Biological Research, 2005 - scielo.br
... The earliest rela- tively low levels of oxygen were probably the result of
photolytic dissociation of water by the sun’s ionizing radiation. ...
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in Saccharomyces cerevisiae - Full text - MIT Libraries
A Kolaczkowska, M Kolaczkowski, A Delahodde, A … - Mol Genet Genomics, 2002 - springerlink.com
Page 1. ORIGINAL PAPER A. Kolaczkowska Æ M. Kolaczkowski Æ A. Delahodde A. Goffeau
Functional dissection of Pdr1p, a regulator of multidrug resistance ...
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Ex pert Opinion on Investigational Drugs
LE Lawrence, JF Barrett - Expert Opinion on Investigational Drugs, 1998 - dx.doi.org
Page 1. Lawrence & Barrett Efflux pumps in bacteria: overview, clinical relevance,
and potential pharmaceutical target Efflux pumps in bacteria: overview, ...
Cited by 1 - Web Search - ingentaconnect.com - ashley-pub.com - pinkerton.ashley-pub.com - all 5 versions »

BMC Cancer - Full text - MIT Libraries
MA Gieseg, MZ Man, NA Gorski, SJ Madore, EP … - BMC Cancer, 2004 - biomedcentral.com
... There were 36 genes with increased expression in the xenograft samples rela- tive
to the tissue cultures samples and 17 genes that showed high expression in ...
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SZPl Is a Catabolite Repression-Specific Negative Regulator of GAL Gene Expression - Full text - MIT Libraries
TE Blankt, E Hpper - Genetics, 1994 - genetics.org
Page 1. Copyright 0 1994 by the Genetics Society of America SZPl Is a Catabolite
Repression-Specific Negative Regulator of GAL Gene Expression ...
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Inaugural-Dissertation
B Tebarth - ulb.uni-duesseldorf.de
Page 1. Regulation der Expression des EFG1-Gens in der Morphogenese des
humanpathogenen Pilzes Candida albicans I NAUGURAL -D ISSERTATION zur ...
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Report Comparative Genomics, Evolution and Origins of the Nuclear Envelope
NP Complex - Cell Cycle, 2004 - landesbioscience.com
Page 1. ©2005 LANDES BIOSCIENCE . DO NO T DISTRIBUTE . [Cell Cycle 3:12, 1612-1637;
December 2004]; ©2004 Landes Bioscience 1612 Cell Cycle 2004; Vol. ...
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Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach - Full text - MIT Libraries
KD Entian, T Schuster, JH Hegemann, D Becher, H … - Mol. Gen. Genet, 1999 - springerlink.com
Page 1. ORIGINAL PAPER KD Entian á T. Schuster á JH Hegemann á D. Becher
H. Feldmann á U. GuÈldener á R. GoÈtz á M. Hansen ...
Cited by 54 - Web Search - springerlink.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

UC Berkeley Division of Biostatistics Working Paper Series
CT Regulatory - bepress.com
Page 1. UC Berkeley Division of Biostatistics Working Paper Series Year 2005 Paper
169 A Causal Inference Approach for Constructing Transcriptional Regulatory ...
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2 The environmental stress response: a common yeast response to diverse environmental stresses
AP Gasch - springerlink.com
Page 1. 2 The environmental stress response: a common yeast response to
diverse environmental stresses Audrey P. Gasch Department ...
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[BOOK] Redox regulation of cell signaling and its clinical application
L Packer, J Yodoi - 1999 - print.google.com
Page 1. Redox ulatioD o'f(eII Si in aod Its (Iloical flpplicatioo ThisOne -KNY
IIIIIIIIIU Page 2. OXJDATIVE STRESS AND DISEASE Series Editors ...
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