How to flip the (redox) switch - Full text - MIT Libraries
G Georgiou - Cell, 2002 - biotech.korea.ac.kr
... rel- OxyR(Cys199-Cys208) discussed in the beginning of this review. The problem
with determining the dominant evant to signal transduction. In both Yap1 and ...
Cited by 26 - View as HTML - Web Search - ncbi.nlm.nih.gov

SELDI-TOF-MS Analysis of Transcriptional Activation Protein Binding to Response Elements Regulating …
SR Bischoff, MB Kahn, MD Powell, WG Kirlin - isuct.ru
... the cytoplasm exists as in a complex of Rel protein dimers with IκB inhibitor
proteins [14]. This ... Under non-stress conditions yeast AP-1 (Yap1) ...
Cited by 1 - View as HTML - Web Search - unibas.ch - msm.edu - fr2.mdpi.net - all 13 versions »

Glutathione is an essential metabolite required for resistance to oxidative stress in the yeast … - Full text - MIT Libraries
CM Grant, FH MacIver, IW Dawes - Curr Genet, 1996 - springerlink.com
... GSH1 disruption plasmid and Dr. WS Moye-Rowley for the YAP1 disruption plasmid ...
Percentage survival is expressed rel- ative to the untreated control cultures (100 ...
Cited by 9 - Web Search

Regulation of yAP-1 nuclear localization in response to oxidative stress - Full text - MIT Libraries
S Kuge, N Jones, A Nomoto - The EMBO Journal, 1997 - embojournal.npgjournals.com
... Blank, V. , Kourilsky, P. and Israël, A. (1992) NF- B related proteins: Rel/dorsal
homologies ... of YAP2, coding for a new yAP protein, and YAP1 in Saccharomyces ...
Cited by 113 - Web Search - emboj.org - lclark.edu - nature.com - all 7 versions »

Identification of Albumin Precursor Protein, Phi AP3, and alpha-Smooth Muscle Actin as Novel … - Full text - MIT Libraries
MT Holderman, KP Miller, LJ Dangott, KS Ramos - Mol Pharmacol, 2002 - molpharm.aspetjournals.org
... factors have been identified in Saccharomyces cerevisiae, including Yap1, Yap2,
and ... Higher eukaryotes have a similar defense strategy, whereby Rel, AP-1, and NF ...
Cited by 4 - Web Search - molpharm.aspetjournals.org - ncbi.nlm.nih.gov

A novel, transformation-relevant activation domain in Fos proteins - Full text - MIT Libraries
M Funk, B Poensgen, W Graulich, V Jerome, R Muller - Mol Cell Biol, 1997 - mcb.asm.org
... and PpuMI sites of the URA3 gene, which was used to replace the YAP1 gene. ... foci only
when expressed from the stronger pR X vector (23-fold higher rel- ative to ...
Cited by 7 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae - Full text - MIT Libraries
T Nevitt, J Pereira, C Rodrigues-Pousada - Yeast, 2004 - doi.wiley.com
... Rel mRNA levels ... performed as described in the legend to Figure 1. (B) Densitometric
representation of YAP4 induction in the wild-type and yap1 mutant strain ...
Cited by 1 - Web Search - ncbi.nlm.nih.gov

Fischer-Vize, Science 270, 1828 (1995). 35. TC James and SC Elgin, Mol. Cell Biol. 6, 3862 (1986); R … - Full text - MIT Libraries
J EMBO, J Bacteriol… - Proc. Natl. Acad. Sci. USA, 1996 - sciencemag.org
... during the diauxic shift, red spots represent genes that were induced rel- ative
to ... used to analyze the effects of the tup1 mu- tation and YAP1 overexpres- sion ...
Web Search - bioweb2.biology.uiowa.edu - gcat.davidson.edu - stat.ucdavis.edu - all 49 versions »

Predicting Genetic Regulatory Response Using Classification
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - Arxiv preprint q-bio.QM/0411028, 2004 - arxiv.org
... dataset, we have two sources of feature information rel- ative to ... Pol- I transcription
termination activity), GAL4 (galactose metabolism), YAP1 (peroxide stress ...
Cited by 10 - View as HTML - Web Search - cs.princeton.edu - math.biu.ac.il - cs.utsa.edu - all 14 versions »

The Arabidopsis NPR1 disease resistance protein is a novel cofactor that confers redox regulation of … - Full text - MIT Libraries
C Despres, C Chubak, A Rochon, R Clark, T Bethune, … - Plant Cell, 2003 - intl.plantcell.org
... These parallels between Yap1 and TGA1 prompted us to investigate whether TGA1 ... been
demonstrated for members of several families, including the Rel-related NF ...
Cited by 29 - Web Search - pubmedcentral.nih.gov - arachnid.botany.utoronto.ca - plantcell.org - all 6 versions »

GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
M Cornell, NW Paton, S Wu, CA Goble, CJ Miller, P … - BIBE, 2001 - ieeexplore.ieee.org
... from experiments involving deletion of the TUP1 gene, over-expression of YAP1,
sporulation, and ... is used to obtain input from the user that is of rel- evance to ...
Cited by 13 - Web Search - doi.ieeecs.org - doi.ieeecomputersociety.org - cs.man.ac.uk - all 7 versions »

A Key to a Door - Full text - MIT Libraries
A Kaffman, EK O’Shea - Annu. Rev. Cell Dev. Biol, 1999 - cellbio.annualreviews.org
... et al 1997 Exportins Los1 Transfer RNA Hellmuth et al 1998 Crm1/Xpo1 Leucine-rich
nuclear Kuge et al 1998, Stade et al 1997, export signal, yAP1 Yan et al 1998 ...
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Signals mediating nuclear targeting and their regulation: Application in drug delivery
DA Jans, CK Chan, S Huebner - Medicinal Research Reviews, 1998 - doi.wiley.com
... h p53 73,79 PQPKKKPL 323 PK/ G NF- B p50 80,81 QRKRQK 372 NF- B p65 82 EEKRKR 286
Chicken v-rel 83 KSKKQK 295 G Dorsal 84 RRKRQR 340 v-jun 85 KSRKRKL 253 IgG ...
Cited by 28 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

Transcriptional Remodeling and G
J Lee, A Romeo, DJ Kosman - jbc.org
Page 1. Transcriptional Remodeling and G 1 Arrest in Dioxygen Stress in
Saccharomyces cerevisiae* (Received for publication, April ...
Web Search - smbs.buffalo.edu - smbs.buffalo.edu

Cooperation of Yeast Peroxiredoxins Tsa 1 p and Tsa 2 p in the Cellular Defense against Oxidative … - Full text - MIT Libraries
CM Wong, Y Zhou, RWM Ng, H Kung, DY Jin - J Biol Chem, 2002 - jbc.org
... Relative intensity (rel. ... 9A). The TSA1-lacZ activity was substantially reduced in
the yap1 tsa2 strain, implying that the basal activation of TSA1 is mediated ...
Cited by 48 - Web Search - dx.doi.org - jbc.org - ncbi.nlm.nih.gov

Oxygen Club OF California
C Santa Barbara - oxyclubcalifornia.org
Page 1. O XYGEN C LUB OF C ALIFORNIA 2004 O XIDANTS AND A NTIOXIDANTS IN B IOLOGY
C O -S PONSORED BY THE L INUS P AULING I NSTITUTE B OOK OF A BSTRACTS ...
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Annual Review of Cell and Developmental Biology - Full text - MIT Libraries
A Kaffman, EK O'Shea - Annual Review of Cell and Developmental Biology, 1999 - cellbio.annualreviews.org
Annual Reviews tagline graphic, ...
Web Search - cellbio.annualreviews.org

Non-small-cell lung cancer molecular signatures recapitulate lung developmental pathways - Full text - MIT Libraries
AC Borczuk, L Gorenstein, KL Walter, AA Assaad, L … - Am J Pathol, 2003 - ajp.amjpathol.org
Page 1. Non-Small-Cell Lung Cancer Molecular Signatures Recapitulate Lung
Developmental Pathways Alain C. Borczuk,* Lyall Gorenstein ...
Cited by 14 - Web Search - cpmcnet.columbia.edu - math.unm.edu - ingentaconnect.com - all 7 versions »

Two enzymes in one: two yeast peroxiredoxins display oxidative stress-dependent switching from … - Full text - MIT Libraries
HH Jang, KO Lee, YH Chi, BG Jung, SK Park, JH Park … - Cell, 2004 - biotech.korea.ac.kr
... generated by the cells was analyzed by reacting them with 1 mM 2,7-DCFH-DA under
a confocal fluorescence microscope. Relative intensity (Rel. ...
Cited by 5 - View as HTML - Web Search - ncbi.nlm.nih.gov

Beyond Transcription—New Mechanisms for the Regulation of Molecular Chaperones - Full text - MIT Libraries
J Winter, U Jakob - Critical Reviews in Biochemistry and Molecular Biology, 2004 - dx.doi.org
... the presence of oxidation-sensitive thiol groups, which are reversibly oxidized
to either form disulfide bonds (eg, OxyR, Yap1, RsrA) (Aslund et ... are rel eased ...
Web Search - crbmb.com - taylorandfrancis.metapress.com - ingentaconnect.com - all 6 versions »

Thioredoxin is an essential protein induced by multiple stresses in Bacillus subtilis - Full text - MIT Libraries
C Scharf, S Riethdorf, H Ernst, S Engelmann, U … - Journal of Bacteriology, 1998 - jb.asm.org
... YAP1 dependent activation of TRX2 is essential for the response of Saccharomyces
cerevisiae to ... Genetics and physiology of the rel system of Bacillus subtilis. ...
Cited by 40 - Web Search - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - csa.com - all 5 versions »

Analyses of stress resistance under laboratory conditions constitute a suitable criterion for wine …
A van Leeuwenhoek - Antonie van Leeuwenhoek, 2004 - springerlink.com
... To do this, we have selected several yeast strains with different fermenta- tive
traits and applied stress conditions that are rel- evant to wine production. ...
Web Search - kluweronline.com

Convergent evolution of crystallin gene regulation in squid and chicken: the AP-1/ARE connection
SI Tomarev, MK Duncan, HJ Roth, A Cvekl, J … - J. Mol. Evol, 1994 - springerlink.com
... (See Materials and Methods.) In addition, the results were normalized rel- ative
to those obtained in parallel transfection tests us- ing an RSV promoter/CAT ...
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Genetic and Biochemical Interactions Among Yar1, Ltv1 and RpS3 Define Novel Links Between … - Full text - MIT Libraries
JW Loar, RM Seiser, AE Sundberg, HJ Sagerson, N … - Genetics, 2004 - genetics.org
... Cells lacking YAR1 were sensitive to oxidative stress induced by treatment with
diamide, at least as sensitive as cells lacking YAP1, the major oxidative stress ...
Web Search - lclark.edu - genetics.org - ncbi.nlm.nih.gov

Jun: transcription factor and oncoprotein - Full text - MIT Libraries
HJ Rahmsdorf - Journal of Molecular Medicine, 1996 - springerlink.com
... genes. This led to isolation of the true yeast homologues of mammalian
Jun proteins, yAP1 and yAP2 [36, 97, 158, 262]. Drosophila ...
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The genomics of yeast responses to environmental stress and starvation - Full text - MIT Libraries
AP Gasch, M Werner-Washburne - Functional & Integrative Genomics, 2002 - springerlink.com
... Page 4. sponded with larger changes in ESR gene expression rel- ative to cells exposed
to a more subtle environmental change (Gasch et al. 2000; Jelinsky et al. ...
Cited by 31 - Web Search - biology.unm.edu - rana.lbl.gov - ncbi.nlm.nih.gov

BMC Cancer - Full text - MIT Libraries
MA Gieseg, MZ Man, NA Gorski, SJ Madore, EP … - BMC Cancer, 2004 - biomedcentral.com
... in the xenograft samples rela- tive to the tissue cultures samples and 17 genes
that showed high expression in the tissue culture samples rel- ative to the ...
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BMC Bioinformatics - Full text - MIT Libraries
GD Bader, CWV Hogue - BMC Bioinformatics, 2003 - biomedcentral.com
... To choose an overlap score that maximizes biological rel- evance of the predicted
complexes without filtering away too many predictions, each of the 840 ...
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Meeting Report: EU–US Workshop on Molecular Signatures of DNA damage-induced Stress Responses: … - Full text - MIT Libraries
M Sander, C Desaintes, R Pelroy, W Ferro, B Van … - Mutation Research, 2004 - medgencentre.nl
Page 1. Mutation Research 550 (2004) 145–181 Conference report Meeting Report:
EU–US Workshop on Molecular Signatures of DNA damage-induced Stress Responses ...
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Free radicals in the physiological control of cell function - Full text - MIT Libraries
W Droge - Physiol Rev, 2002 - intl-physrev.physiology.org
Institution: Google Indexer Sign In as Member/Non-Member. Physiol. Rev. 82:
47-95, 2002; 0031-9333/02 $15.00 Abstract of this Article ( ). ...
Cited by 424 - Web Search - dife.de - ncbi.nlm.nih.gov - joplink.net - all 7 versions »

[BOOK] Redox regulation of cell signaling and its clinical application
L Packer, J Yodoi - 1999 - print.google.com
Page 1. Redox ulatioD o'f(eII Si in aod Its (Iloical flpplicatioo ThisOne -KNY
IIIIIIIIIU Page 2. OXJDATIVE STRESS AND DISEASE Series Editors ...
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