Computational analysis of composite regulatory elements - Full text - MIT Libraries
P Qiu, W Ding, Y Jiang, JR Greene, L Wang - Mammalian Genome, 2002 - springerlink.com
... AP2 SP1 1708.7 ER PAX3 173.1 MZF1 RREB1 58.4 MYCMAX WHN 28.9 COUP HNF4
1698.5 NFY PBX1 170.4 NFKAPPAB50 SP1 57.6 CEBP GATA1 28.9 ...
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Annotating significant pairs of transcription factor binding sites in regulatory DNA - Full text - MIT Libraries
K Rateitschak, T Mueller, M Vingron - In Silico Biol, 2004 - iospress.metapress.com
... ATF6,MAX 1.7 STAT1,CREB 1.8 PITX2,GNCF 2.0 GABP,GABP 1.7 ELK,GABP 1.8
ARP1,GATA1 1.9 MAX,SREBP1 1.7 RREB1,CMYB 1.7 MAZR,RREB1 1.8 ...
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Regulatory Sequence Analysis of Coclustering Genes
A TFBS - ahavj.ahajournals.org
... GATA1, 14/52=27, 11/29=38, 4/11=36, 3/6=50, 6/16=38, 2/3=67, 1/4=25, 2/9=22,
0/1=0, 1/1=100. ... RREB1, 13/52=25, 1/29=3, 0/11=0, 1/6=17, 3/16=19, 1/3=33, 2/4=50, ...
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A statistical analysis of the TRANSFAC database.
GB Fogel, DG Weekes, G Varga, ER Dow, AM Craven, … - Biosystems, 2005 - natural-selection.com
... Table 2 TFBS with known “terminal N” artifacts in TRANSFAC ® TFBS family Description
GATA1 02 GATA-binding factor 1 GATA1 03 GATA-binding factor 1 GATA1 ...
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PAINT: A Promoter Analysis and Interaction Network Generation Tool for Gene Regulatory Network …
R Vadigepalli, P Chakravarthula, DE Zak, JS … - Omics A Journal of Integrative Biology, 2003 - dx.doi.org
... V$RORA/T3R.01 0.084161 0.04346 — V$RREB/RREB1.01 0.037354 0.017974 0.56438 ...
V$FKHD/FREAC3.01 0.32708 0.84037 0.04263 V$GATA/GATA1.03 0.17291 0.44277 0.098765 ...
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Genome-wide prediction and analysis of function-specific transcription factor binding sites - Full text - MIT Libraries
F Long, H Liu, C Hahn, P Sumazin, MQ Zhang, A … - In Silico Biology, 2004 - iospress.metapress.com
... of endogenous antigen via MHC class I biological processes, while RREB1-NF-κB ... GATA1
06(M00347) 9.56E-04 The GATA transcription factor family has been found to ...
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