Hypoxia-inducible Mammalian Gene Expression Analyzed in Vivo at a TATA-driven Promoter and at an … - Full text - MIT Libraries
ST Okino, CH Chichester, JP Whitlock Jr - J Biol Chem, 1998 - jbc.org
... basic helix-loop-helix; PAS, Per/Arnt/Sim; Arnt, aromatic hydrocarbon ... mindedTBP,
TATA-binding proteinTFIID, transcription factor IIDTAF, TBP-associated factor. ...
Cited by 11 - Web Search - jbc.org - jbc.org - ncbi.nlm.nih.gov

Lack of an absolute requirement for the native aryl hydrocarbon receptor (AhR) and AhR nuclear … - Full text - MIT Libraries
WP Long, GH Perdew - Arch. Biochem. Biophys, 1999 - cas.psu.edu
... to associate, in vitro, with the basal transcrip- tion factors transcription factor
IIF (TFIIF) and TATA- binding protein (TBP), while the ARNT TAD has been ...
Cited by 7 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - all 4 versions »

Dioxin-induced CYP1A1 transcription in vivo: the aromatic hydrocarbon receptor mediates … - Full text - MIT Libraries
HP Ko, ST Okino, Q Ma, JP Whitlock Jr - Mol Cell Biol, 1996 - mcb.asm.org
... NF1, nuclear factor 1; TBP, TATA-binding protein; GBP, G-box-binding ... importance,
depending upon the biological context in which Arnt-dependent signaling occurs ...
Cited by 58 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Dioxin induces localized, graded changes in chromatin structure: implications for Cyp1A1 gene … - Full text - MIT Libraries
ST Okino, JP Whitlock Jr - Mol. Cell. Biol, 1995 - mcb.asm.org
... The mechanism by which AhR/Arnt might facilitate the binding of general transcription
factors, such as TBP, to pro- moter DNA remains to be determined. ...
Cited by 40 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

Transactivation Domains Facilitate Promoter Occupancy for the Dioxin-Inducible CYP1A1 Gene In Vivo
HP KO, ST OKINO, Q MA, JP WHITLOCK JR - Plasmid - mcb.asm.org
... indicate a binding site for the AhR-Arnt heterodimer. (B) Protein-DNA interactions
at the CYP1A1 promoter. Brackets indicate binding sites for NF1 and TBP. ...
Cited by 25 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - Get it from MIT Libraries

Ligand-independent recruitment of steroid receptor coactivators to estrogen receptor by cyclin D1 - Full text - MIT Libraries
RM Zwijsen, RS Buckle, EM Hijmans, CJ Loomans, R … - Genes Dev, 1998 - genesdev.org
... the basal transcriptional apparatus, including the TATA-box-binding protein TBP
(Sadovsky et ... regions contain basic helix-loop-helix (bHLH) and Per-ARNT-Sim (PAS ...
Cited by 92 - Web Search - genesdev.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Induction of CYP1A1. The AhR/DRE paradigm: transcription, receptor regulation, and expanding …
Q Ma - Curr Drug Metab, 2001 - ingentaconnect.com
... promoter has binding sites for several general transcription factors, including
the TATA-binding protein (TBP). ... AhR and Arnt Mediate the Induction of CYP1A1 ...
Cited by 33 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

Isoform-specific expression of hypoxia-inducible factor-1alpha during the late stages of mouse … - Full text - MIT Libraries
HH Marti, DM Katschinski, KF Wagner, L Schaffer, B … - Mol Endocrinol, 2002 - mend.endojournals.org
... We previously showed that, when HIF-1 is absent, ARNT is decreased in ... specific
promoter/first exon combinations of the TATA-binding protein (TBP) (30) and GATA ...
Cited by 11 - Web Search - mend.endojournals.org - ncbi.nlm.nih.gov

The anatomy of transcription sites
DA Jackson - Current Opinion in Cell Biology, 2003 - cbi.pku.edu.cn
... of such sites was the subject of a recent study of the aryl hydrocarbon receptor
(AhR) and its binding partner the AhR nuclear translocator (ARNT/HIF-1b) [8 ...
Cited by 1 - View as HTML - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

DNA methylation represses the expression of the human erythropoietin gene by two different … - Full text - MIT Libraries
H Yin, KL Blanchard - Blood, 2000 - bloodjournal.org
... the transcription start site may serve as the dock for TFIID/TBP and may ... interact
with hypoxia-inducible factor-1 (HIF1), 63 a heterodimer of HIF1- , and ARNT. ...
Cited by 10 - Web Search - bloodjournal.org - bloodjournal.org - ncbi.nlm.nih.gov - all 5 versions »

L’ARN molecule therapeutique? Vers une conception rationnelle du developpement des ARN antisens, …
E Bertrand, C Gwizdek, D Fenard, A Doglio - medecine/sciences, 1999 - ist.inserm.fr
... III - ARN nucléaire (ARNt) ou cytoplasmique (VA1 ARN) - signal d’arrêt spécifique ...
22. Goodrich JA, Tjian R. TBP-TAF com- plexes : selectivity factors for ...
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The subdomains of the transactivation domain of the aryl hydrocarbon receptor (AhR) inhibit AhR and … - Full text - MIT Libraries
RK Reen, A Cadwallader, GH Perdew - Arch. Biochem. Biophys, 2002 - cas.psu.edu
... may directly interact with basal transcription factors (eg, TFIIB, TBP, and TFIIF)
to activate gene expression [13,14]. The binding of AhR/Arnt heterodimer to ...
Cited by 9 - View as HTML - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - all 4 versions »

Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning … - Full text - MIT Libraries
RD Phair, P Scaffidi, C Elbi, J Vecerova, A Dey, K … - Mol. Cell. Biol, 2004 - pubmedcentral.nih.gov
... These data are consistent with a model in which ARNT scans potential target ... TBP dynamics
in living human cells: constitutive association of TBP with mitotic ...
Cited by 23 - Web Search - dx.doi.org - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

3-Methylcholanthrene Activates Human Immunodeficiency Virus Type 1 Replication via Aryl Hydrocarbon … - Full text - MIT Libraries
H Ohata, T Tetsuka, H Hayashi, K Onozaki, T … - Microbiol. Immunol, 2003 - sanbi.co.jp
... Formation of the AhR/Arnt heterodimer converts the complex into its high affinity ...
but may interact with general transcription factors such as TBP (TATA binding ...
View as HTML - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - sanbi.co.jp

Herpes simplex virus 1 alpha regulatory protein ICP0 functionally interacts with cellular … - Full text - MIT Libraries
Y Kawaguchi, M Tanaka, A Yokoymama, G Matsuda, K … - J. Gen. Virol, 2005 - dx.doi.org
... factor BMAL1, a member of the basic helix-loop-helix PER-ARNT-SIM (PAS) super ... 1 EICP0
Protein with the Immediate-Early (IE) Protein, TFIIB, and TBP May Mediate ...
Cited by 19 - Web Search - pnas.org - intl.pnas.org - pubmedcentral.nih.gov - all 6 versions »

Genetica y medicina molecular en cardiologia
C PLURICELULAR - Rev Esp Cardiol, 2001 - doyma.es
Page 1. 91 CONSTITUCIÓN PLURICELULAR Y PROCESOS DE DIVISIÓN CELULAR La
información genética almacenada en una célula es requerida ...
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Adaptations of the helix-grip fold for ligand binding and catalysis in the START domain superfamily - Full text - MIT Libraries
LM Iyer, EV Koonin, L Aravind - Proteins Structure Function and Genetics, 2001 - doi.wiley.com
... 1–7 Several domains such as Per–Arnt– Sim domain (PAS), 4 cGMP Phosphodiesterase ...
an / struc- ture of the helix-grip [TATA binding protein (TBP)-like] fold ...
Cited by 17 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Nuclear Receptors: Nomenclature, Ligands, Mechanisms of Their Effects on Gene Expression
AN Smirnov - BIOCHEMISTRY (Moscow), 2002 - kluweronline.com
... may also interact with the main transcriptional factors, such as TFIIB and TBP. ...
helix–loop–helix PAS domains (regions of homology with Per/Arnt/Sim proteins ...
Cited by 4 - Web Search - springerlink.com - ncbi.nlm.nih.gov - maik.ru - Get it from MIT Libraries

In Silico Identification of Regulatory Elements of GRIN 1 Genes
MK Mejia-Guerra, LR Lareo - Omics A Journal of Integrative Biology, 2005 - dx.doi.org
... Lyf-1 (4 copies), E12 600 to 500 c-Ets-1 Ap-2 TBP, D1 ATF, C/EBP , FtZ, RAR ... 800 to
700 MEF2 Bsap, SRF- ARNT- HMG-IY, AGL3, nMyc SQUA Max- Myc- Max, ARNT- nMyc ...
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Expression of human and mouse genes encoding polkappa: testis-specific developmental regulation and … - Full text - MIT Libraries
T Ogi, J Mimura, M Hikida, H Fujimoto, Y Fujii- … - Genes to Cells, 2001 - blackwell-synergy.com
... Upon binding to an arylhydrocarbon ligand, the receptor enters the nucleus,
where it forms a complex with Arnt (AhR nuclear translocator). ...
Cited by 15 - Web Search - ingentaconnect.com - genestocellsonline.org - ncbi.nlm.nih.gov - all 5 versions »

DEA de Genomique et Informatique
V JOUFFE - irisa.fr
... permet la prédiction des gènes et des ARN de transfert (ARNt), la recherche ... archaéen
interviennent une ADN polymérase de type II, la proteine TBP (TATA-box ...
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[BOOK] Molecular Toxicology
N Plant - 2003 - print.google.com
... AhR aryl hydrocarbon receptor ARE antioxidant response element ARNT AhR nuclear ...
polymorphism 55DNA single strand DNA SULT sulphotransferase TBP TATAA binding ...
Cited by 1 - Web Search - Get it from MIT Libraries - Library Search

Role of the Ada adaptor complex in gene activation by the glucocorticoid receptor - Full text - MIT Libraries
A Henriksson, T Almlof, J Ford, IJ McEwan, JA … - Mol. Cell. Biol, 1997 - mcb.asm.org
... of direct interactions between Ada proteins and the transactivation domains of VP16
and Gcn4 as well as with the TATA-binding protein (TBP; Spt15) within the ...
Cited by 34 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Developmental Expression of Transcription Factors
AIP Tacc - acta.uta.fi
... cell nuclear antigen PI3K phosphatidylinositol-3 kinase PAS Per-Arnt-Sim PAX ... containing
protein TAF TATA-binding protein associated factor TBP TATA-binding ...
Web Search

A CCAAT/Enhancer-binding Protein Site within Antioxidant/Electrophile Response Element Along with … - Full text - MIT Libraries
YH Chen, KS Ramos - J Biol Chem, 2000 - jbc.org
... the components of the basal transcription complex machinery (eg TBP, TBIIF and RNA
polymerase II) (29). Thus, competition by activators (eg AhR·Arnt in our ...
Cited by 8 - Web Search - jbc.org - ncbi.nlm.nih.gov

Mapping and characterization of the mouse and human SS18 genes, two human SS18-like genes and a …
DRH de Bruijn, E Kater-Baats, M Eleveld, G Merkx, … - Cytogenet Cell Genet, 2001 - content.karger.com
... nearest gene, pointing away from the SS18 gene, is TAF2C2, the TBP associated factor ...
factors AP2, AP4, SP1, NF1, GC1, TCF11, USF, GKLF, AP1, ARNT, delta-EF1 ...
Cited by 7 - Web Search - content.karger.com - dx.doi.org - karger.com

Nuclear hormone receptors and gene expression - Full text - MIT Libraries
A Aranda, A Pascual, A Aranda, A Pascual - Physiol. Rev, 2001 - intl-physrev.physiology.org
... TFIID, whose binding to the promoter is thought to be a rate-limiting step in
transcriptional initiation, is composed of TBP (or TATA binding protein) and TBP ...
Cited by 218 - Web Search - npb.ucdavis.edu - 129.22.208.68 - pharm.cwru.edu - all 16 versions »

Molecular mechanisms and cellular biology of the steroid receptor coactivator (SRC) family in …
J Xu, BW O’Malley - Rev. Endocr. Metab. Disord, 2002 - springerlink.com
... Their N-terminal bHLH/PAS (basic±loop±basic/Per/ARNT/Sim) domain is the most conserved ...
that SRC-1 also interacts with certain GTFs such as TFIIB and TBP [12 ...
Cited by 11 - Web Search - kluweronline.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

[BOOK] Biologie moleculaire de la cellule
H Lodish, D Baltimore, A Berk, L Zipursky, P … - 2000 - print.google.com
Page 1. BIO, L 0 GIE MO LECU LA IRE DE LA CELLULE Th j On e IIIIIIII!
IIIIIIIIIIIIIIIIIIIIIIIIIIIiiiiiii111111 3TRD-NX4 2OBS Page 2. Chez le même éditeur ...
Cited by 4 - Web Search - ingentaconnect.com - Get it from MIT Libraries - Library Search

Role of hydrophobic amino acid clusters in the transactivation activity of the human glucocorticoid … - Full text - MIT Libraries
T Almloef, JA Gustafsson, APH Wright - Mol. Cell. Biol, 1997 - mcb.asm.org
... in vitro and/or in vivo with one or more general transcription factors within the
basal transcription machinery, such as the TATA-binding protein (TBP) (40, 41 ...
Cited by 26 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Programmable DNA Binding Oligomers for Control of Transcription
PB Dervan, RM Doss, MA Marques - etd.caltech.edu
Page 1. 1 Chapter 1 Programmable DNA Binding Oligomers for Control of
Transcription The text of this chapter was taken in part from ...
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Aryl Hydrocarbon Receptor-Mediated Transcription: Ligand-Dependent Recruitment of Estrogen Receptor … - Full text - MIT Libraries
J Matthews, B Wihlen, J Thomsen, JA Gustafsson - Mol Cell Biol, 2005 - mcb.asm.org
... The aryl hydrocarbon receptor (AhR) is a ligand-activated transcription factor and
a member of the basic-helix-loop-helix Per (Period)-ARNT (aryl hydrocarbon ...
Web Search - mcb.asm.org - ncbi.nlm.nih.gov

Interaction Networks in Yeast Define and Enumerate the Signaling Steps of the Vertebrate Aryl … - Full text - MIT Libraries
G Yao, M Craven, N Drinkwater, CA Bradfield - PLoS Biol, 2004 - dx.doi.org
... because modifiers were identified in this study from an “ARNT-free” chimeric AHR ...
interaction of the AHR with basal transcriptional factors TBP, TFIIF, and ...
Cited by 1 - Web Search - plbi.allenpress.com - medicine.plosjournals.org - pubmedcentral.nih.gov - all 9 versions »

Inhibition of PPAR 2 gene expression by the HIF-1-regulated gene DEC1/Stra13: a mechanism for … - Full text - MIT Libraries
Z Yun, HL Maecker, RS Johnson, AJ Giaccia - Dev Cell, 2002 - cbrl.stanford.edu
Page 1. Developmental Cell, Vol. 2, 331–341, March, 2002, Copyright 2002
by Cell Press Inhibition of PPAR 2 Gene Expression by the ...
Cited by 51 - View as HTML - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

Environmental Dioxins and Endometriosis - Full text - MIT Libraries
S Rier, WG Foster - Toxicological Sciences, 2002 - toxsci.oupjournals.org
... Yeaman and Collins, 2000 ) and the mRNA of AhR and ARNT are constitutively ...
Administration of recombinant TNF binding protein-1 (TBP-1) inhibits the growth ...
Cited by 18 - Web Search - thieme-connect.com - ingentaconnect.com - ncbi.nlm.nih.gov - all 9 versions »

UNIVERSIDAD COMPLUTENSE DE MADRID
RPORCY AMPC - tesis.sim.ucm.es
... TBP Proteína de unión a la caja TATA ... procariotas es degradado rápidamente o cortado
para originar los productos finales maduros (ARNr y ARNt), en eucariotas ...
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Transcription factors having impact on vascular endothelial growth factor (VEGF) gene expression in … - Full text - MIT Libraries
J Jośko, M Mazurek - Med Sci Monit, 2004 - medscimonit.com
... HIF-1a/Arnt, HIF-2a/HLF/HRF, Ap-1, Ap-2, HAF, Sp-1, Sp-3, NFcB, STAT proteins, Smad,
p300/CBP, estrogens, progestins IL-1b, Il-6, PDGF, TGF-a/b, TNF-a, EGF ...
Cited by 6 - View as HTML - Web Search - fceqyn.unam.edu.ar - medscimonit.com - ncbi.nlm.nih.gov

Chapter 2.8 Modulation of Soluble Receptor Signaling by Coregulators
M KUMAR, GH PERDEW - cas.psu.edu
... 43 . In the case of the AhR and ARNT, the bHLH and ... Page 6. 6 factors such as TATA
binding factor (TBP) and transcription factor IIB, which suggests a ...
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Gene Expression and Its Physiological Control in Disease and Development
E ULLERAaS - diva-portal.org
... EMSA Electro-mobility shift assay EPAS Endothelial per-arnt-sim GAP Growth associated
protein ... SNS Sympathetic nervous system TAF TBP associated factor ...
View as HTML - Web Search - publications.uu.se

Cross-talk between xenobiotic detoxication and other signalling pathways: clinical and toxicological …
JM Pascussi, S Gerbal-Chaloin, L Drocourt, E Ass& … - Xenobiotica, 2004 - dx.doi.org
... the aryl hydrocarbon receptor (AhR), a member of the Per/ARNT/Sim (PAS ... RNA polymerase
II core protein, the general transcription factors (including TBP the TATA ...
Web Search - taylorandfrancis.metapress.com - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions » - Get it from MIT Libraries

Assessment of the gene expression profile of differentiated and dedifferentiated human fetal … - Full text - MIT Libraries
DG Stokes, G Liu, IB Coimbra, S Piera-Velazquez, … - Arthritis & Rheumatism, 2002 - doi.wiley.com
... STAT2 Hs.72988 3 1.2 5398 (TBP)-associated factor IIA (250 kd) Hs.1179
3 1.2 5292 T cell nuclear receptor NOT Hs.82120 3 1.2 4703 ...
Cited by 22 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Analysis of transcription factors binding to the human 7SL RNA gene promoter - Full text - MIT Libraries
J Mueller, BJ Benecke - Biochem. Cell Biol, 1999 - article.pubs.nrc-cnrc.gc.ca
... ont déjà été identifiées dans les gènes de l’ARN 5S, des ARNt et de ... effect cannot
be explained by an inactiva- tion of the heat-labile TBP component of ...
Cited by 5 - Web Search - dx.doi.org - pubs.nrc-cnrc.gc.ca - ncbi.nlm.nih.gov - all 6 versions »

K1-Basal Transcription Machinery - Full text - MIT Libraries
P Cramer - Science, 2000 - blackwell-synergy.com
... TBPs, probably due to modifications in amino acids involved in TBP-DNA binding ... as
including the basic helix-loop-helix dimerization domain, PER- ARNT-SIM domain ...
Web Search

No circadian rhythms in testis: Period1 expression is clock independent and developmentally … - Full text - MIT Libraries
D Morse, N Cermakian, S Brancorsini, M Parvinen, P … - Mol Endocrinol, 2003 - mend.endojournals.org
... Abbreviations: BMAL1, Brain and muscle ARNT-like protein; CRE, cAMP response element;
CREM ... M, Davidson I, Sassone-Corsi P 2002 Distinct functions of TBP and TLF ...
Cited by 11 - Web Search - oob.nl - dx.doi.org - ncbi.nlm.nih.gov - all 6 versions »

Ligand binding and nuclear receptor evolution - Full text - MIT Libraries
H Escriva, F Delaunay, V Laudet - BioEssays, 2000 - doi.wiley.com
... (33) Likewise, a similar model has been proposed for the PAS (Per, Arnt,
Sim) protein family, which contains the dioxin receptor. ...
Cited by 54 - Web Search - ibmb.uni.wroc.pl - cmbi.kun.nl - ncbi.nlm.nih.gov - all 6 versions »

Oxygen-sensitive pro-inflammatory cytokines, apoptosis signaling and redox-responsive transcription … - Full text - MIT Libraries
JJ Haddad - transition - dx.doi.org
... helix–loop–helix (bHLH)-PAS proteins: HIF-1 was a novel protein; HIF-1 was identical
to the aryl hydrocarbon receptor nuclear translocator (ARNT) protein. ...
Cited by 1 - Web Search - taylorandfrancis.metapress.com - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

The coregulator exchange in transcriptional functions of nuclear receptors - Full text - MIT Libraries
CK Glass, MG Rosenfeld - Genes Dev, 2000 - genesdev.org
... SAGA complex has revealed that it also contains a subset of proteins TBP-associated
factor ... PAS domain that is also present in members of the Per/Arnt/Sim family ...
Cited by 692 - Web Search - ncu.edu.tw - cpmcnet.columbia.edu - apodaca2.dept-med.pitt.edu - all 9 versions »

[PS] Planification et raisonnement progressif
S Le Gloannec - Troisiemes Journees Nationales sur Processus Decisionnel de … - users.info.unicaen.fr
Page 1. Planication et raisonnement progressif Simon Le Gloannec
(gloannec@loria.fr) 1 Introduction De grands progres ontetes eectues ...
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Ah receptor: Involvement in toxic responses
TA Gasiewicz, SK Park - Dioxins and Health, 2003 - doi.wiley.com
... in vitro AhR and ARNT have been found to interact directly with several proteins
which make up the basal transcriptional machinery, such as TBP (TATA-box ...
Cited by 4 - Web Search

Molecular mechanisms of retinoid action - Full text - MIT Libraries
H Gronemeyer, R Miturski - Cell. Mol. Biol. Lett, 2001 - cmbl.org.pl
Page 1. CELLULAR & MOLECULAR BIOLOGY LETTERS Volume 6, (2001) pp 3 – 52
Received 15 June 2000 Accepted 4 September 2000 MOLECULAR ...
Cited by 17 - Web Search - biochem.microb.uni.wroc.pl - ncbi.nlm.nih.gov