Effect of DNA-binding drugs on early growth response factor-1 and TATA box-binding protein complex … - Full text - MIT Libraries
SY Chiang, JJ Welch, FJ Rauscher, TA Beerman - J Biol Chem, 1996 - jbc.org
... Mobility shift assays examined the effect of AT- and GC-binding drugs on the DNA
complex formation of individual TFs (ie TBP and EGR1) that recognize either AT ...
Cited by 12 - Web Search - jbc.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Repression of the HSV-1 latency-associated transcript (LAT) promoter by the early growth response ( …
WA Tatarowicz, CE Martin, AS Pekosz, SL Madden, FJ … - J. Neurovirol, 1997 - jneurovirol.com
... the HSV-1 wt-LAT promoter oligomer probe was incubated in the presence of TBP (Figure
5, lanes 5± 8). The binding pattern of both TBP and EGR1 zinc finger (zf ...
Cited by 5 - View as HTML - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

Identification of different isoforms of eEF 1 A in the nuclear fraction of human T-lymphoblastic … - Full text - MIT Libraries
B Dapas, G Tell, A Scaloni, A Pines, L Ferrara, F … - European Journal of Biochemistry, 2003 - ejbiochem.org
... To test for nuclear enrichment, nuclear and cytoplasmic extracts were blotted and
assayed for the nuclear proteins Egr1 and TBP. The results displayed in Fig. ...
Cited by 3 - Web Search - content.febsjournal.org - blackwell-synergy.com - ingentaconnect.com - all 10 versions »

Molecular Profiling of Inflammatory Breast Cancer - Full text - MIT Libraries
I Bieche, F Lerebours, S Tozlu, M Espie, M Marty, … - Clinical Cancer Research, 2004 - clincancerres.aacrjournals.org
... 1. mRNA levels of JUN, EGR1, and DUSP1 in 22 individual non-IBCs (gray ... show the
abundance of the target relative to the endogenous control (TBP), to normalize ...
Web Search - clincancerres.aacrjournals.org - ncbi.nlm.nih.gov

Context-dependent Transcriptional Regulation - Full text - MIT Libraries
CJ Fry, PJ Farnham - J Biol Chem, 1999 - dx.doi.org
... protein brings NF1 closer to the basal transcription complex (eg TBP); placement
of ... GC-rich DNA-binding transcription factors; binding of Sp1 and Egr1 is often ...
Cited by 76 - Web Search - jbc.org - ncbi.nlm.nih.gov

Context-dependent Transcriptional Regulation
TACB Achieved - cbr.med.harvard.edu
... enhancer-binding factor 1; TBP, TATA-binding protein; TAF, TBP-associated factor ...
GC-rich DNA-binding transcription fac- tors; binding of Sp1 and Egr1 is often ...
View as HTML - Web Search - genomecenter.ucdavis.edu - mcardle.oncology.wisc.edu - genomics.ucdavis.edu - all 6 versions »

Transcription factors as targets for DNA-interacting drugs
M Gniazdowski, WA Denny, SM Nelson, M Czyz - Curr. Med. Chem, 2003 - ingentaconnect.com
... on interaction of several proteins which interact mutually with DNA [1,2]. Only
RNA polymerase (POL II), TATA binding protein (TBP), transcription factor Sp1 ...
Cited by 6 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

Molecular Profiles of Neurofibromatosis Type 1-Associated Plexiform Neurofibromas - Full text - MIT Libraries
P Levy, I Bieche, K Leroy, B Parfait, J Wechsler, … - Clinical Cancer Research, 2004 - clincancerres.aacrjournals.org
... amount of the target message relative to the endogenous control TBP message, to ... Other
early growth-response genes (MYC and EGR1), which code for transcription ...
Cited by 1 - Web Search - clincancerres.aacrjournals.org - ncbi.nlm.nih.gov

Non-additivity in protein-DNA binding - Full text - MIT Libraries
RA O'Flanagan, G Paillard, R Lavery, AM Sengupta - Bioinformatics, 2005 - bioinformatics.oxfordjournals.org
... adjacent nucleotides, as in the pioneering experimental studies of Mnt and EGR1
cited above ... a good example being the TATA-box binding protein (TBP), which must ...
Web Search - bioinformatics.oupjournals.org - ingentaconnect.com - ncbi.nlm.nih.gov - all 6 versions »

Induction of p 57 KIP 2 expression by p 73 beta - Full text - MIT Libraries
E Balint, AC Phillips, S Kozlov, CL Stewart, KH … - Proceedings of the National Academy of Sciences, 2002 - pnas.org
... of the human p57 KIP2 transcription initiation site contains binding sites for numerous
transcription factors including SP1, NF1, OCT1, EGR1, TBP, and ETS (40 ...
Cited by 7 - Web Search - pubmedcentral.nih.gov - pnas.org - dx.doi.org - all 5 versions »

Induction of p57 KIP2 expression by p73
E Balint, AC Phillips, S Kozlov, CL Stewart, KH … - pnas.org
... of the human p57 KIP2 transcription initiation site contains binding sites for numerous
transcription factors includ- ing SP1, NF1, OCT1, EGR1, TBP, and ETS (40 ...
Web Search

Ciao 1 Is a Novel WD 40 Protein That Interacts with the Tumor Suppressor Protein WT 1 - Full text - MIT Libraries
RW Johnstone, J Wang, N Tommerup, H Vissing, T … - J Biol Chem, 1998 - jbc.org
... a GC-rich oligonucleotide, described previously as an EGR1 consensus site ... polyacrylamide
gel electrophoresis; kb, kilobase pair(s); TAF, TBP- associated factor ...
Cited by 27 - Web Search - dx.doi.org - jbc.org - ncbi.nlm.nih.gov - all 6 versions »

Hepatitis B Virus X Protein: Structure, Function and Biology
S Murakami, S Murakami, FTC Alert - Intervirology, 1999 - content.karger.com
... Egr1 EMSA HBx (53–142) 70 for increased expression of TGFß zinc finger ... General
transcription factors TBP TATA binding Pull, CoIP 65 ATP-dependent binding ...
Cited by 42 - Web Search - dx.doi.org - karger.com - ncbi.nlm.nih.gov - all 6 versions » - Get it from MIT Libraries

cAMP-response-element-binding-protein-binding protein (CBP) and p300 are transcriptional co- … - Full text - MIT Libraries
ES Silverman, J Du, AJ Williams, R Wadgaonkar, JM … - Biochem. J, 1998 - biochemj.org
... of the basal transcription complex, including TATA-box binding pro- tein (TBP) and
transcription ... were incubated with 10 µg\ml rabbit anti- Egr1, anti-p300 ...
Cited by 30 - View as HTML - Web Search - biochemj.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Drosophila NAB(dNAB) is an orphan transcriptional co-repressor required for correct CNS and eye … - Full text - MIT Libraries
M Clements, D Duncan, J Milbrandt - Developmental Dynamics, 2003 - doi.wiley.com
... transcription; co-repressor; NGFI-A; NGFI-A binding protein; EGR1; Drosophila;
neuroblast ... though Dr1 directly binds the TATA- binding protein (TBP; Inostroza et ...
Cited by 2 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

BIOINFORMATICS ORIGINAL PAPER
T Boby, AM Patch, SJ Aves - bioinformatics.oxfordjournals.org
... 6 SCA1 TGC 30.3 95 Spinocerebellar ataxia 1 6 TBP GCA 37 94 Spinocerebellar ataxia
17 ... 5 EGR1 GCA 9 91 Early growth response-1 5 MAP3K1 CAA 8.7 100 MAPKKK 1 ...
Web Search

Expression profiling identifies strain-specific changes associated with ethanol withdrawal in mice - Full text - MIT Libraries
GM Daniels, KJ Buck - Genes Brain and Behavior, 2002 - blackwell-synergy.com
... the genes for TATA box binding protein (TBP) and a TBP-associated factor ... Egr1, Atf1,
Tieg and Btg2 all encode additional transcription factors activated by MAPK ...
Cited by 18 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

The Enigmatic X Gene of Hepatitis B Virus - Full text - MIT Libraries
GFOF HBx, IS HBx, HL CYCLE - J Virol, 2004 - pubmedcentral.nih.gov
... c/EBP, NF-IL-6, Egr1, Ets, Oct1, RXR receptor, SMAD4, and IκBα, among others) and
components of the basal transcription machinery (RPB5, TFIIB, TBP, and TFIIH ...
Web Search

The Enigmatic X Gene of Hepatitis B Virus - Full text - MIT Libraries
MJ Bouchard, RJ Schneider - J. Virol, 2004 - jvi.asm.org
... c/EBP, NF-IL-6, Egr1, Ets, Oct1, RXR receptor, SMAD4, and I B , among others) and
components of the basal transcription machinery (RPB5, TFIIB, TBP, and TFIIH ...
Cited by 1 - Web Search - jvi.asm.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Multifunctional zinc finger proteins in development and disease - Full text - MIT Libraries
M LADOMERY, G DELLAIRE - Annals of Human Genetics, 2002 - journals.cambridge.org
... Like EGR1, WT1 zinc fingers bind to GC rich DNA target sequences (Nardelli et al. ...
1993); and TAFII68, a TBP-associated fac- tor (TATA-binding protein; basal ...
Cited by 13 - Web Search - blackwell-synergy.com - ingentaconnect.com - fhcrc.org - all 6 versions »

REGULATION OF GENE EXPRESSION
OOF TRANSCRIPTIONAL - acnp.org
... The TATA-binding protein (TBP)initiates the forma- tion of the basal transcription
complex along with multiple TBP-associated proteins (TAFs)and multiple ...
Web Search

The role of the IGF axis in hepatocarcinogenesis - Full text - MIT Libraries
JG Scharf, T Braulke - Horm Metab Res, 2003 - thieme-connect.com
... and DNA binding of two cis-acting elements, the Sp1 and Egr1 binding sites [53]. ...
either through DNA-protein (Sp1 or TATA box binding protein (TBP)) or protein ...
Cited by 3 - Web Search - thieme-connect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

TRbase: a database relating tandem repeats to disease genes for the human genome - Full text - MIT Libraries
T Boby, AM Patch, SJ Aves - Bioinformatics, 2004 - bioinformatics.oupjournals.org
... 6 SCA1 TGC 30.3 95 Spinocerebellar ataxia 1 6 TBP GCA 37 94 Spinocerebellar ataxia
17 ... 5 EGR1 GCA 9 91 Early growth response-1 5 MAP3K1 CAA 8.7 100 MAPKKK 1 ...
Web Search - bioinformatics.oupjournals.org - ingentaconnect.com - ncbi.nlm.nih.gov - all 7 versions »

Gene expression analysis of peripheral blood leukocytes from discordant sib-pairs with schizophrenia … - Full text - MIT Libraries
FA Middleton, CN Pato, KL Gentile, L McGann, AM … - American Journal of Medical Genetics Part B ( …, 2005 - doi.wiley.com
... EGR1 5q31.1 ... SEL1L 14q24.3-q31 202840_at 1.41 0.01641 TAF15 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 68 kDa TAF15 17q11.1-q11.2 ...
Web Search - ncbi.nlm.nih.gov

The transcription factor Net regulates the angiogenic switch - Full text - MIT Libraries
H Zheng, C Wasylyk, A Ayadi, J Abecassis, JA … - Genes & Development, 2003 - genesdev.org
... by Western blotting for the expression of P-Net, endogenous VEGF, and TBP (loading
control ... AP2 and Egr1 have been shown to bind to the related region of the ...
Cited by 6 - Web Search - pubmedcentral.nih.gov - dx.doi.org - ncbi.nlm.nih.gov - all 6 versions »

ONCOGENOMICS - Full text - MIT Libraries
M Van Gele, GM Boyle, AL Cook, J Vandesompele, T … - Oncogene, 2004 - nature.com
... A complete list of SAM genes differentially expressed between MCC and SCLC is given
in Table 3. Two genes, FLT1 and EGR1 (Table 3, footnote f), were however ...
Web Search

Cyclic Adenosine Monophosphate (cAMP) Stimulation of the Kit Ligand Promoter in Sertoli Cells … - Full text - MIT Libraries
P Grimaldi, F Capolunghi, R Geremia, P Rossi - Biol Reprod, 2003 - bioone.org
... Although overlapping binding sites for transcription factors Sp1 and Egr1 are present
in ... alteration of the interaction between a component of TFIID (TBP and/or ...
Cited by 3 - Web Search - biolreprod.org - biolreprod.org - ncbi.nlm.nih.gov - all 7 versions »

Cyclic AMP stimulation of the Kit Ligand promoter in Sertoli cells requires a Sp1-binding region, a …
P Grimaldi, F Capolunghi, R Geremia, P Rossi - biolreprod.org
... shown). The anti- 9 Egr1 antibody inhibited formation the nucleoprotein complex
formed with the Egr-1 probe (fig 5E, 10 middle panel ...
Web Search

Sp1 dependence of natriuretic peptide receptor A gene transcription in rat aortic smooth muscle … - Full text - MIT Libraries
F Liang, F Schaufele, DG Gardner - Endocrinology, 1999 - endo.endojournals.org
... Neither antibody directed against Egr1, a transcription factor that also recognizes
GC-rich ... 6641[Medline]; Tansey WP, Herr W 1997 Selective use of TBP and TFIIB ...
Cited by 8 - Web Search - endo.endojournals.org - ncbi.nlm.nih.gov

Composition-sensitive analysis of the human genome for regulatory signals - Full text - MIT Libraries
OV Kel-Margoulis, D Tchekmenev, AE Kel, E … - In Silico Biology, 2003 - iospress.metapress.com
... 95 0.9 V$SRF_C M00215 SRF DCCWTATATGGNCW 46.2 15 15,22 0.92 V$TATA_01 M00252
TATA box / TBP STATAAAWR 37.7 15 10,08 0.86 V$USF_Q6 ...
Cited by 11 - Web Search - bioinfo.de - tbiomed.com - ncbi.nlm.nih.gov - all 6 versions »

Transcription of the bone sialoprotein gene is stimulated by v-Src acting through an inverted CCAAT … - Full text - MIT Libraries
RH Kim, J Sodek - Cancer Res, 1999 - intl-cancerres.aacrjournals.org
... to modulate gene expression through serum-responsive elements of the Egr1/TIS8 gene ...
K., Roeder RG, Tora L., Mantovani R. CCAAT binding NF-Y-TBP interactions: NF ...
Cited by 21 - Web Search - cancerres.aacrjournals.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Integrated assessment by multiple gene expression analysis of quercetin bioactivity on anticancer- …
B van Ommen - springerlink.com
Page 1. Eur J Nutr (2004) ■: DOI 10.1007/s00394-004-0503-1 ■ Summary
Background Many different mechanisms are involved in nutrient ...
Web Search

Cutting edge: the class II transactivator prevents activation-induced cell death by inhibiting Fas … - Full text - MIT Libraries
TS Gourley, CH Chang - J. Immunol, 2001 - jimmunol.org
... by interacting with Egr members based on a report that Egr1 interacts with ... The class
II trans-activator CIITA interacts with the TBP-associated factor TAFII32. ...
Cited by 28 - Web Search - jimmunol.org - jimmunol.org - ncbi.nlm.nih.gov - all 5 versions »

Evaluation of the host transcriptional response to human cytomegalovirus infection - Full text - MIT Libraries
JF Challacombe, A Rechtsteiner, R Gottardo, LM … - Physiological Genomics, 2004 - physiolgenomics.physiology.org
Page 1. Evaluation of the host transcriptional response to human cytomegalovirus
infection Jean F. Challacombe 1 , Andreas Rechtsteiner ...
Web Search - stat.washington.edu - intl-physiolgenomics.physiology.org - ncbi.nlm.nih.gov - all 6 versions »

The p 53 story: layers of complexity - Full text - MIT Libraries
AW Braithwaite, JA Royds, P Jackson - Carcinogenesis, 2005 - carcin.oxfordjournals.org
... showing that mutant p53 can specifically regulate the expression of CD95, EGR1 and
MSP ... Histone acetyl transferase (HAT; bound to p53) and TBP (bound to the TATA ...
Web Search - carcin.oxfordjournals.org - ingentaconnect.com - ncbi.nlm.nih.gov

Mediators of ischemic preconditioning identified by microarray analysis of rat spinal cord - Full text - MIT Libraries
JB Carmel, O Kakinohana, R Mestril, W Young, M … - Exp Neurol, 2004 - cord.rutgers.edu
... two probes), as well as five other mRNAs: cyclin-dependent kinase inhibitor 1A
(Cdkn1a, aka p21 WAF ), a UV radiation-activated gene (U96), TBP inter- acting ...
Cited by 6 - View as HTML - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

Online Table: Mouse mutations causing reproductive defects. Only single mutant defects are described …
M gene Sex, RPFS References, MS degeneration … - Infertility - nature.com
... Early growth response 1 (Egr1; NGFI-A) targeted lacZ insertion ... Infertility
76 Early growth response 1 (Egr1) targeted neo insertion ...
View as HTML - Web Search - tu-cottbus.de

Identification of Target Genes of Oncogenic Transcription Factors - Full text - MIT Libraries
KE Boyd, PJ Farnham - Proceedings of The Society for Experimental Biology and …, 1999 - ebmonline.org
... E2F transactivation domain has been shown to interact with several components of
the basal RNA polymerase II transcriptional machinery, such as TBP, TFIIH, and ...
Cited by 14 - Web Search - ebmonline.org - ncbi.nlm.nih.gov

Angiopoietin-1 modulates endothelial cell function and gene expression via the transcription factor … - Full text - MIT Libraries
C Daly, V Wong, E Burova, Y Wei, S Zabski, J … - Genes & Development, 2004 - genesdev.org
... by Akt were four genes that are induced by FKHR (FABP4, EGR1, CLEC2, and ... the levels
of the control RNAs cyclophilin and TATA-box-binding protein (TBP; data not ...
Cited by 4 - Web Search - genesdev.org - pubmedcentral.nih.gov - dx.doi.org - all 7 versions »

The von Hippel-Lindau tumor suppressor gene product interacts with Sp1 to repress vascular … - Full text - MIT Libraries
D Mukhopadhyay, B Knebelmann, HT Cohen, S Ananth, … - Mol Cell Biol, 1997 - mcb.asm.org
Page 1. M OLECULAR AND C ELLULAR B IOLOGY , 0270-7306/97/$04.00 0 Sept. 1997, p.
5629–5639 Vol. 17, No. 9 Copyright © 1997, American Society for Microbiology ...
Cited by 138 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Identification of Target Genes of Oncogenic Transcription Factors (44425)
KE Boyd, PJ Farnham - ingentaconnect.com
... E2F transactivation domain has been shown to interact with several components of
the basal RNA polymerase II transcriptional machinery, such as TBP, TFIIH, and ...
Web Search - genomics.ucdavis.edu - mcardle.oncology.wisc.edu

Kodierungsvielfalt der Phospholipid-Hydroperoxid Glutathion-Peroxidase
D der Naturwissenschaften - edocs.tu-berlin.de
... Set EDTA Ethylendiamintetraessigsäure EGR early growth response gene family EGR1
early growth ... Protein 1 SV40 Simian virus 40 TAFs TBP assoziierte Faktoren TBP ...
View as HTML - Web Search

Transcription factors, normal myeloid development, and leukemia - Full text - MIT Libraries
DG Tenen, R Hromas, JD Licht, DE Zhang - Blood, 1997 - bloodjournal.org
... Because PU.1 can bind to the TATA binding protein (TBP) in vitro, 57 one mechanism
by which PU.1 could activate a whole class of myeloid promoters is by ...
Cited by 353 - Web Search - bloodjournal.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Poster Session II Signaling
AOFRAT INCISOR, M TEETH - Connective Tissue Research, 2003 - taylorandfrancis.metapress.com
Page 1. Connective Tissue Research, 44(Suppl. 1): 342–350, 2003 Copyright c 2003
Taylor & Francis 0300-8207/03 $12.00 + .00 DOI: 10.1080/03008200390181870 ...
Web Search

Genetic dissection of mammalian fertility pathways - Full text - MIT Libraries
MM Matzuk, DJ Lamb - Nature Cell Biology, 2002 - mrg.genetics.washington.edu
Page 1. s41 Genetic dissection of mammalian fertility pathways Martin M.
Matzuk*†‡#and Dolores J. Lamb†§ Departments of *Pathology ...
Cited by 60 - View as HTML - Web Search - nature.com - tu-cottbus.de - ncbi.nlm.nih.gov - all 5 versions »

Molecular regulation of vascular smooth muscle cell differentiation in development and disease - Full text - MIT Libraries
GK Owens, MS Kumar, BR Wamhoff - Physiol Rev, 2004 - physrev.physiology.org
Institution: Google Indexer Sign In as Member/Non-Member. Physiol. Rev. 84:
767-801, 2004; 10.1152/physrev.00041.2003 0031-9333/04 $15.00 ...
Cited by 32 - Web Search - dx.doi.org - physrev.physiology.org - ncbi.nlm.nih.gov

Miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis - Full text - MIT Libraries
W Deng, H Lin, D Qiao… - Dev Cell, 2002 - linweb.cellbio.duke.edu
Page 1. Developmental Cell, Vol. 2, 819–830, June, 2002, Copyright 2002 by Cell
Press miwi, a Murine Homolog of piwi, Encodes a Cytoplasmic Protein ...
Cited by 8 - View as HTML - Web Search - ncbi.nlm.nih.gov

Gene expression profiling of parkinsonian substantia nigra pars compacta; alterations in ubiquitin- … - Full text - MIT Libraries
E Gruenblatt, S Mandel, J Jacob-Hirsch, S Zeligson … - Journal of Neural Transmission, 2004 - springerlink.com
Page 1. DOI 10.1007/s00702-004-0212-1 J Neural Transm (2004) 111: 1543–1573
Gene expression profiling of parkinsonian substantia nigra ...
Cited by 2 - Web Search - eng.sheba.co.il - eng.sheba.co.il - ncbi.nlm.nih.gov

Expression Profiling of Mammalian Male Meiosis and Gametogenesis Identifies Novel Candidate Genes … - Full text - MIT Libraries
U Schlecht, P Demougin, R Koch, L Hermida, C … - Mol. Biol. Cell, 2004 - molbiolcell.org
... signal transduction (Ctgf, Egr1, Fgfr1, Igfbp2, Igfbp3, Pdgfa, Vegf), serum response
and ... locus encoding the rat TATA box binding protein (Tbp, represented by ...
Cited by 4 - Web Search - pubmedcentral.nih.gov - biozentrum.unibas.ch - dx.doi.org - all 10 versions »

Promoters and control elements: designing expression cassettes for gene therapy
ED Papadakis, SA Nicklin, AH Baker, SJ White - Curr Gene Ther, 2004 - ingentaconnect.com
Page 1. Current Gene Therapy, 2004, 4, 89-113 89 1566-5232/04 $45.00+.00 ©
2004 Bentham Science Publishers Ltd. Promoters and Control ...
Cited by 4 - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries