Application of Ingenuity Pathways Analysis to Identify Putative Biomarkers of Childhood Leukemia …
IA Spectrum - Cancer - ingenuity.com
... CHD4,Histone H3,Histone H4, MADH1, MADH4,MEIS1, MLL,PBX1, SIN3A, SMARCA2,
SPP1,TAF6,TBP CDKN1A,E2F1, HOXA10, HOXA11, HOXA9, HOXB13, HOXB9, HOXD12,Malic Enzyme ...
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Rapid Generation of de novo Biological Pathways from Large-Scale Gene Expression Data Using the …
DC Siu - ingenuity.com
... Malic Enzyme, HOXA9, HOXA11, HOXD12, HOXB13, SST, RB1, E2F1, HOXA10, CDKN1A PBX1,
SPP1, MEIS1, MADH1, MADH4, MLL, CHD4, SMARCA2, TAF6, SIN3A, TBP, Histone H3 ...
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Polycomb, epigenomes, and control of cell identity - Full text - MIT Libraries
V Orlando - Cell, 2003 - biology.ccsu.edu
... domain and a hinge domain (Muchardt et al., 2002). ments have shown that TBP, GTFs,
and other compo- ... Recent TBP and blocks recruitment of TFIID (Li and Manley, ...
Cited by 75 - View as HTML - Web Search - ingentaconnect.com - ingentaconnect.com - ncbi.nlm.nih.gov - all 5 versions »

[PS] CITATIONS FOR PROTEIN/DNA (REGULATORY) - Full text - MIT Libraries
PDA White, X Ding, JC Vanderspek, JR Murphy, D … - J. Biol. Chem, 2004 - aist.go.jp
... PD0070 O.Littleeld, Y.Korkhin, PB.Sigler The structural basis for the oriented assembly
of a TBP/TFB/promoter complex Proc.Nat.Acad.Sci.USA, 96, 13668-13673 ...
Cited by 10 - View as HTML - Web Search - ndbserver.rutgers.edu - ndbserver.rutgers.edu

Regulation of insulin-like growth factor binding protein-1 promoter activity by FKHR and HOXA10 in … - Full text - MIT Libraries
JJ Kim, HS Taylor, GE Akbas, I Foucher, A … - Biol Reprod, 2003 - biolreprod.org
... In the developing reproductive tract, four genes of the HOXA cluster (HOXA9, HOXA10,
HOXA11, and HOXA13) are expressed [15]. ... TBP, TATA binding protein. ...
Cited by 12 - Web Search - bioone.org - biolreprod.org - ncbi.nlm.nih.gov - all 6 versions »

HOXA genes are included in genetic and biologic networks defining human acute T-cell leukemia (T-ALL … - Full text - MIT Libraries
J Soulier, E Clappier, JM Cayuela, A Regnault, M … - Blood, 2005 - bloodjournal.org
... normalized on the basis of the expression of 2 housekeeping genes, ABL1 and TBP. ...
The genes that mainly define this cluster are HOXA5, HOXA9, HOXA10, and LRIG1 ...
Web Search - bloodjournal.org - ncbi.nlm.nih.gov

Translocations, fusion genes, and acute leukemia - Full text - MIT Libraries
V Saha, BD Young, PS Freemont - Journal of Cellular Biochemistry, 1998 - doi.wiley.com
... HOXA9 7p15 HD AML ... protein (CEBP), the retinoblastoma gene product (pRb) and members
of the basal transcription complex such as the TATA binding protein (TBP). ...
Cited by 16 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Ethidium Bromide Provides a Simple Tool for Identifying Genuine DNA-Independent Associations - Full text - MIT Libraries
J Lai, W Herr - Proceedings of the National Academy of Sciences - pnas.org
... A. Kwong, LG Komuves, HJ Lawrence, and C. Largman HOXA9 Forms Triple ... of Yeast
Transcriptional Regulator, Mot1, with TATA Box-binding Protein (TBP) J. Biol. ...
Web Search - adsabs.harvard.edu

Polycomb complexes and silencing mechanisms
AH Lund, M van Lohuizen - Curr. Opin. Cell Biol, 2004 - mcb.berkeley.edu
... block the access of chromatin remodeling factors to an artificial chromatin template
[59]; however, members of the transcription machinery, such as TBP and RNA ...
Cited by 20 - View as HTML - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

Absence of granulocyte colony-stimulating factor signaling and neutrophil development in CCAAT … - Full text - MIT Libraries
DE Zhang, P Zhang, ND Wang, CJ Hetherington, GJ … - Proc. Natl. Acad. Sci. USA, 1997 - dx.doi.org
Full Text of this Article. PDF Version of this Article. Similar articles found
in: PNAS Online ISI Web of Science PubMed. PubMed Citation. ...
Cited by 353 - Web Search - pnas.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 6 versions »

How to make an egg: transcriptional regulation in oocytes - Full text - MIT Libraries
JL Song, GM Wessel - Differentiation, 2005 - blackwell-synergy.com
... ALF interacts with the small TFIIA subunit to form a heterodimeric complex that
stabilizes binding of TBP (TATA-binding protein) to core promoter DNA. ...
Web Search - ncbi.nlm.nih.gov

Transcription factors, normal myeloid development, and leukemia - Full text - MIT Libraries
DG Tenen, R Hromas, JD Licht, DE Zhang - Blood, 1997 - bloodjournal.org
... Because PU.1 can bind to the TATA binding protein (TBP) in vitro, 57 one mechanism
by which PU.1 could activate a whole class of myeloid promoters is by ...
Cited by 353 - Web Search - bloodjournal.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Maintenance of gene expression patterns - Full text - MIT Libraries
HW Brock, CL Fisher - Developmental Dynamics, 2005 - doi.wiley.com
Page 1. REVIEWS–A PEER REVIEWED FORUM Maintenance of Gene Expression Patterns
Hugh W. Brock* and Cynthia L. Fisher In development ...
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The granulocytic inducer C/EBP a inactivates the myeloid master regulator PU. 1: possible role in …
AMK und Poliklinik, III am Klinikum Grosshadern - edoc.ub.uni-muenchen.de
... its down-regulation is necessary for progression of erythropoiesis HOXA9 important
role ... interacting protein (Pip), NF-IL6 (C/EBPd), c-Jun, TBP, RB, GATA1 and ...
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SUPPLEMENTARY DATA FOR CLASSIFICATION, SUBTYPE DISCOVERY, AND PREDICTION OF OUTCOME IN PEDIATRIC …
I Section, E Methods, II Section, P Dataset - stjuderesearch.org
Page 1. SUPPLEMENTARY DATA FOR CLASSIFICATION, SUBTYPE DISCOVERY, AND PREDICTION
OF OUTCOME IN PEDIATRIC ACUTE LYMPHOBLASTIC LEUKEMIA ...
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[BOOK] Molecular biology of cancer
F Macdonald, CHJ Ford, AG Casson - 2004 - print.google.com
Page 1. r ff 1 Page 2. V 1V L ) TEXT !Bloinformatics C A. Orengo, DT Jones
and JM Thornton (Eds) ISBN: 1 859960545 Published: November ...
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Histone acetylation and the cell-cycle in cancer
C Wang, M Fu, S Mani, S Wadler, AM Senderowicz, RG … - Front Biosci, 2001 - xylian.igh.cnrs.fr
... leukaemia fuses the genes for nucleoporin NUP98 and class I homeoprotein HOXA9. ... Z.
Shao, and PD Robbins: Cyclin D1 associates with the TBP-associated factor ...
Cited by 28 - Cached - Web Search - bioscience.org - bioscience.org - ncbi.nlm.nih.gov - all 7 versions » - Get it from MIT Libraries

Specific homeodomain-DNA interactions are required for HOX11-mediated transformation - Full text - MIT Libraries
BM Owens, YX Zhu, TC Suen, PX Wang, JF Greenblatt, … - Blood, 2003 - bloodjournal.org
Page 1. Specific homeodomain-DNA interactions are required for HOX11-mediated
transformation Bronwyn M. Owens, 1,3 † Yuan-Xiao ...
Cited by 2 - Web Search - bloodjournal.org - ncbi.nlm.nih.gov

Barrier proteins remodel and modify chromatin to restrict silenced domains - Full text - MIT Libraries
M Oki, L Valenzuela, T Chiba, T Ito, RT Kamakaka - Mol. Cell. Biol, 2004 - pubmedcentral.nih.gov
... 1999. CREB binding protein interacts with nucleoporin-specific FG repeats that activate
transcription and mediate NUP98-HOXA9 oncogenicity. Mol. Cell. Biol. ...
Cited by 10 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Novel transcription factors in human CD34 antigen-positive hematopoietic cells - Full text - MIT Libraries
I Gomes, TT Sharma, S Edassery, N Fulton, BG Mar, … - Blood, 2002 - bloodjournal.org
... Abundance Characterization Hs.16697 DR1 Down-regulator of transcription 1,
TBP-binding (negative cofactor 2) 1p22.1 9.8 L W Hs.182237 ...
Cited by 3 - Web Search - bloodjournal.org - dx.doi.org - ncbi.nlm.nih.gov - all 7 versions »

Genomic and proteomic analysis of the myeloid differentiation program. II. Global analysis of gene … - Full text - MIT Libraries
Z Lian, Y Kluger, DS Greenbaum, D Tuck, M Gerstein … - Blood, 2004 - bloodjournal.org
Page 1. Genomic and proteomic analysis of the myeloid differentiation program.
II. Global analysis of gene expression during induced ...
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Barrier Proteins Remodel and Modify Chromatin To Restrict Silenced Domains {dagger}
M Oki, L Valenzuela, T Chiba, T Ito, RT Kamakaka - mcb.asm.org
MCB Figure table search 04 Home Help [Feedback] [For Subscribers] [Archive] [Search]
[Contents] Institution: Google Indexer Sign In as Member ...
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The diverse superfamily of lysine acetyltransferases and their roles in leukemia and other diseases - Full text - MIT Libraries
XJ Yang - Nucleic Acids Research, 2004 - nar.oupjournals.org
... non-derepressible 5) (13), PCAF (60), p300 (E1A-associated 300 kDa protein) (43),
CBP (CREB-binding protein) (43,44) and TAF II 250 (TBP-associated factor of ...
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Modeling Nonlinear Gene Interactions using Bayesian MARS
V Baladandayuthapani, CC Holmes, RJ Carroll, BK … - stat.tamu.edu
Page 1. Modeling Nonlinear Gene Interactions using Bayesian MARS Veerabhadran
Baladandayuthapani 1 , Chris. C. Holmes 2 , Raymond J. Carroll 1 and ...
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