The upstream activator CTF/NF1 and RNA polymerase II share a common element involved in … - Full text - MIT Libraries
H Xiao, JT Lis, H Xiao, J Greenblatt, JD Friesen - Nucleic Acids Res, 1994 - nar.oupjournals.org
... We further show that the proline-rich activation domain of CTF/NF1 interacts directly
with the TATA-box-binding protein (TBP), and that a mutation in the CTD ...
Cited by 30 - Web Search - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

The translational placement of nucleosome cores in vitro determines the access of the transacting … - Full text - MIT Libraries
H Patterton, J Hapgood - Nucleic Acids Research, 1996 - nar.oupjournals.org
... This result suggests that in vivo suGF1, like TBP, NF1 and heat shock factor, may
require a complementary nucleosome disrupting activity or that suGF1 binds to ...
Cited by 6 - Web Search - nar.oupjournals.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Transactivation Domains Facilitate Promoter Occupancy for the Dioxin-Inducible CYP1A1 Gene In Vivo
HP KO, ST OKINO, Q MA, JP WHITLOCK JR - Plasmid - mcb.asm.org
... (B) Protein-DNA interactions at the CYP1A1 promoter. Brackets indicate binding sites
for NF1 and TBP. 3500 KO ET AL. M OL . C ELL . B IOL . Page 5. V OL . ...
Cited by 25 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - Get it from MIT Libraries

[CITATION] Nucleosome sliding via TBP DNA binding in vivo - Full text - MIT Libraries
S Lomvardas, D Thanos, M Biophysics - Cell, 2001 - Elsevier Science
... Increasing amounts of equivalent DNA binding units of TBP, TFIID, GAL4 (1–147),
LEF HMG , or NF1 were added as indicated during incubation with the HNEs. ... NF1 ...
Cited by 50 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - all 3 versions »

TATA-Binding Protein (TBP)-Like Factor (TLF) Is a Functional Regulator of Transcription: Reciprocal … - Full text - MIT Libraries
JA Chong, MM Moran, M Teichmann, JS Kaczmarek, R … - Mol Cell Biol, 2005 - mcb.asm.org
... TBP affects the NF1 and c-fos promoters in a manner reciprocal to that of TLF,
stimulating the c-fos promoter and inhibiting NF1 transcription. ...
Web Search - clapham.tch.harvard.edu - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Identification of the transcriptional repression domain of nuclear factor 1-A - Full text - MIT Libraries
S Osada, T Ikeda, M Xu, T Nishihara, M Imagawa - Biochem. Biophys. Res. Commun, 1997 - ingentaconnect.com
... with the general transcription factors, the NF1-A repression domains did not interact
with transcription factor IIB, TATA-binding protein (TBP), or TBP ...
Cited by 20 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov

Context-dependent Transcriptional Regulation - Full text - MIT Libraries
CJ Fry, PJ Farnham - J Biol Chem, 1999 - dx.doi.org
... induced by a properly positioned YY1 protein brings NF1 closer to the basal
transcription complex (eg TBP); placement of YY1 upstream of NF1 abolishes YY1 ...
Cited by 76 - Web Search - jbc.org - ncbi.nlm.nih.gov

NF1 Transcriptional Factor (s) Is Required for Basal Promoter Activation of the Human Intestinal … - Full text - MIT Libraries
H Xu, JK Uno, M Inouye, JF Collins, FK Ghishan - Am J Physiol Gastrointest Liver Physiol, 2005 - ajpgi.physiology.org
... NF1 has been reported to interact with basal transcription factors, such as human ...
initiation factor (TFIIB) and yeast TATA box-binding protein (TBP) (16, 17 ...
Web Search - dx.doi.org - ajpgi.physiology.org - ncbi.nlm.nih.gov

Chromatin remodeling by nuclear receptors - Full text - MIT Libraries
PB Hebbar, TK Archer - Chromosoma, 2003 - springerlink.com
... conformation (Fig. 2). This repressive chromatin structure of the promoter
excludes the binding of NF1, OTF and TBP. Upon hormone ...
Cited by 10 - Web Search - ncbi.nlm.nih.gov

NF1 Transcriptional Factor (s) Is Required for Basal Promoter Activation of the Human Intestinal …
R Title - ajpgi.physiology.org
... 4 transcription factors, such as human TFIIB and yeast TBP (16, 17), to activate
transcription. Thus, the NF1 site located in the human NaPi-IIb promoter might ...
Web Search

Nuclear factor 1 is required for both hormone-dependent chromatin remodeling and transcriptional … - Full text - MIT Libraries
PB Hebbar, TK Archer - Mol. Cell. Biol, 2003 - mcb.asm.org
... It was observed previously that, in contrast to NF1, OTF and TBP are weak binders
and hence do not impede the digestion of template by ExoIII (36). ...
Cited by 13 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov

Context-dependent Transcriptional Regulation
TACB Achieved - cbr.med.harvard.edu
... induced by a properly positioned YY1 protein brings NF1 closer to the basal
transcription complex (eg TBP); placement of YY1 upstream of NF1 abolishes YY1 ...
View as HTML - Web Search - genomecenter.ucdavis.edu - mcardle.oncology.wisc.edu - genomics.ucdavis.edu - all 6 versions »

Modifying chromatin to permit steroid hormone receptor-dependent transcription
HK Kinyamu, TK Archer - Biochim Biophys Acta, 2004 - biochem.wisc.edu
... 54]. This structural change in the chromatin structure allows NF1, OTF
and TBP to bind their respective binding sites [50]. The ...
Cited by 8 - View as HTML - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

28th Annual Meeting of the Nordic Microcirculation Society
TSP Neurofibromin, SIG Reaction, PA Disease - J Vasc Res, 1998 - content.karger.com
... is a 280-kD tumor suppressor protein encoded by the type 1 neurofibromatosis gene
(NF1). ... A common method is the measurement of toe blood pressure (TBP). ...
Web Search - content.karger.com

Steroid and nuclear receptors - Full text - MIT Libraries
L Di Croce, S Okret, S Kersten, JA Gustafsson, M … - EMBO J, 1999 - embojournal.npgjournals.com
... In the TFIID complex, TAFs are associated with TBP, whereas in the SAGA ... the functional
synergism between hormone receptors and nuclear factor 1 (NF1), which is ...
Cited by 30 - Web Search - nature.com - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 7 versions »

The RNA polymerase I promoter-activating factor CPBF is functionally and immunologically related to … - Full text - MIT Libraries
PK Datta, AK Ghosh, ST Jacob - J Biol Chem, 1995 - jbc.org
... polymerase I, initiation of rDNA transcription requires TATA-binding factor (TBP)
and TBP-associated pol ... MT-I MRE-d, ( d) mouse MT-I Sp1, ( e) CTF/NF1, and ( f ...
Cited by 11 - Web Search - jbc.org - ncbi.nlm.nih.gov

Exploring the transcription-chromatin interface - Full text - MIT Libraries
KA Jones, JT Kadonaga - Genes Dev, 2000 - genesdev.org
... There are also direct interactions between the TAF subunits (TBP-associated factors ...
recruited by hormone receptors allowed subsequent binding of NF1, which in ...
Cited by 33 - Web Search - ncu.edu.tw - ncu.edu.tw - ncbi.nlm.nih.gov

Expression, DNA-binding specificity and transcriptional regulation of nuclear factor 1 family … - Full text - MIT Libraries
S Osada, T Matsubara, S Daimon, Y Terazu, M Xu, T … - Biochem. J, 1999 - biochemj.org
... domain was identified in the C-terminal region of human NF1-C and selectively interacts
with TFIIB, TATA-binding protein (TBP), TBP-associated factor 55 and ...
Cited by 17 - View as HTML - Web Search - biochemj.org - dx.doi.org - ncbi.nlm.nih.gov - all 5 versions »

Three classes of mammalian transcription activation domain stimulate transcription in … - Full text - MIT Libraries
JE Remacle, G Albrecht, R Brys, GH Braus, D … - The EMBO Journal, 1997 - embojournal.npgjournals.com
... Finally, the proline-rich activation domains of AP-2 and CTF/NF1 display considerable ...
cerevisiae even in concert with human TATA-binding protein (TBP) or human ...
Cited by 20 - Web Search - nature.com - emboj.org - ncbi.nlm.nih.gov - all 6 versions »

Transcription factor access to chromatin - Full text - MIT Libraries
M Beato, K Eisfeld - Nucleic Acids Research, 1997 - nar.oupjournals.org
... experiments performed with the TATA box binding protein TBP (16 ,17 ... also a synergistic
interaction with other ubiquitous factors, in particular NF1, binding to ...
Cited by 59 - Web Search - nar.oupjournals.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Transcriptional activators differ in their responses to overexpression of TATA-box-binding protein - Full text - MIT Libraries
Y Sadovsky, P Webb, G Lopez, JD Baxter, PM … - Mol Cell Biol, 1995 - mcb.asm.org
... nated by overexpressed TBP. Thus, GAL4/NF1 and GAL4/Sp1 predominate over
ER in determining the reaction to TBP. Endogenous Sp1 and NF ...
Cited by 81 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Recruiting TATA-binding protein to a promoter: transcriptional activation without an upstream … - Full text - MIT Libraries
H Xiao, JD Friesen, JT Lis - Mol. Cell. Biol, 1995 - mcb.asm.org
... 11 residues of yTBP were replaced with the first 45 residues of the Drosophila TBP. ...
CTF R contains a derivative of the proline- rich domain of CTF/NF1 with its ...
Cited by 66 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Glucocorticoid receptor-glucocorticoid response element binding stimulates nucleosome disruption by … - Full text - MIT Libraries
AKO Farrants, P Blomquist, H Kwon, O Wrange - Mol Cell Biol, 1997 - mcb.asm.org
... The effect of SWI/SNF activity on the access of GR and NF1 to their ... by the yeast
and human SWI/SNF com- plexes, binding of GAL4 derivatives and TBP to their ...
Cited by 6 - Web Search - mcb.asm.org - pubmedcentral.nih.gov

Transcription Factors
S Veeraraghavan - www-bmb.med.uth.tmc.edu
... TFIID binds TATA box. TBP component of TFIID interacts with TFIIA. ... promoters
CTF (CCAAT-binding factor or NF1, 60 kD) mammalian cells ...
View as HTML - Web Search

Heterogeneous nuclear ribonucleoprotein K is a transcription factor - Full text - MIT Libraries
EF Michelotti, GA Michelotti, AI Aronsohn, D … - Mol. Cell. Biol, 1996 - mcb.asm.org
... hnRNP K column removed a general transcription component, for example a TBP-TAF
complex ... the flowthrough of the GST-hnRNP K column to support NF1/CTF activation ...
Cited by 136 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Glutamine-rich Domains Activate Transcription in Yeast Saccharomyces cerevisiae - Full text - MIT Libraries
H Xiao, KT Jeang - J Biol Chem, 1998 - jbc.org
... of VP16 (23), pGAL4-CTF1 contains amino acids 399-499 of CTF/NF1 (24), and ... was based
on the assumption that yeast lacked an Sp1-specific TBP-associated factor ...
Cited by 15 - Web Search - jbc.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Involvement of AP-2 in regulation of the R-FABP gene in the developing chick retina - Full text - MIT Libraries
DA Bisgrove, EA Monckton, R Godbout - Mol Cell Biol, 1997 - mcb.asm.org
... 2 antibody. Supershifting was not obtained in the presence of either TBP
antibody (shown) or NF1 antibody (not shown). We used the ...
Cited by 10 - Web Search - graduate-studies-in-cancer-research.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Molecular Profiles of Neurofibromatosis Type 1-Associated Plexiform Neurofibromas - Full text - MIT Libraries
P Levy, I Bieche, K Leroy, B Parfait, J Wechsler, … - Clinical Cancer Research, 2004 - clincancerres.aacrjournals.org
... and Samples Tissue specimens were obtained from 27 patients with NF1 at Henri ... genes
involved in two cellular metabolic pathways, namely TBP (GenBank accession ...
Cited by 1 - Web Search - clincancerres.aacrjournals.org - ncbi.nlm.nih.gov

DNA alterations during multi-step development of human hepatocellular carcinomas revealed by laser …
H Nagai, M Emi, Y Terada, M Baba, M Shimizu, N … - Hepatology Research, 2003 - ingentaconnect.com
... into three groups: (1) LCN profile-allelic loss at chromosomal arms 1q and 14q,
TBP and BRCA1; (2) HCC profile-LOH at 4q, 6q, 7q, 17p, NF1, IGFIIr and p53 in ...
Cited by 1 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

Dioxin induces localized, graded changes in chromatin structure: implications for Cyp1A1 gene … - Full text - MIT Libraries
ST Okino, JP Whitlock Jr - Mol. Cell. Biol, 1995 - mcb.asm.org
... (B) Protein-DNA interactions on the Cyp1A1 promoter; LMPCR analysis with primer
set D. Binding sites for nuclear factor 1 (NF1) and TBP are indicated. ...
Cited by 40 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

Regulatory elements of hepatitis B virus transcription - Full text - MIT Libraries
N Moolla, M Kew, P Arbuthnot - Journal of Viral Hepatitis, 2002 - blackwell-synergy.com
... A Sp1 site overlaps the TBP site [18 ... elements that increase production of the 2.4
kb transcript through interaction with the transcription factors, NF1 and the ...
Cited by 6 - Web Search - ingentaconnect.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Dioxin-induced CYP1A1 transcription in vivo: the aromatic hydrocarbon receptor mediates … - Full text - MIT Libraries
HP Ko, ST Okino, Q Ma, JP Whitlock Jr - Mol Cell Biol, 1996 - mcb.asm.org
... See the text for details. NF1, nuclear factor 1; TBP, TATA-binding protein; GBP,
G-box-binding protein; Pol II, RNA polymerase II. 434 KO ET AL. M OL . C ELL . ...
Cited by 58 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Molecular profiling of malignant peripheral nerve sheath tumors associated with neurofibromatosis … - Full text - MIT Libraries
P Levy, D Vidaud, K Leroy, I Laurendeau, J … - Molecular Cancer, 2004 - dx.doi.org
... The mean TBP gene Ct (threshold cycle) values for the four tumor samples were 26.18 ...
The NF1 gene expression level did not differ between the dermal neurofibroma ...
Web Search - pubmedcentral.nih.gov - bmc.ub.uni-potsdam.de - molecular-cancer.com - all 10 versions »

Evaluation of computer tools for the prediction of transcription factor binding sites on genomic DNA … - Full text - MIT Libraries
E Roulet, I Fisch, T Junier, P Bucher, N Mermod - In Silico Biology, 1998 - iospress.metapress.com
... Therefore the CTF/NF1 binding site weight matrix was given a very low ... Experimentally
Determined Weight Matrix Definitions of the Initiator and TBP Binding Site ...
Cited by 21 - Web Search - bioinfo.de - bioinfo.de - ncbi.nlm.nih.gov

The HIV-1 virion-associated protein vpr is a coactivator of the human glucocorticoid receptor - Full text - MIT Libraries
T Kino, A Gragerov, JB Kopp, RH Stauber, GN … - J. Exp. Med, 1999 - jem.org
... respectively; and the synthetic GRE-containing plasmids, pGRE 2 -NF1-E1B-CAT ... Proteins
were precipitated by anti-human TFIID (TBP) antibody, anti-human TFIIB ...
Cited by 79 - Web Search - jem.org - georg-speyer-haus.de - ncbi.nlm.nih.gov - all 5 versions »

In vivo transcription factor recruitment during thyroid hormone receptor-mediated activation - Full text - MIT Libraries
MK Kim, JS Lee, JH Chung - Biochemistry, 1999 - pnas.org
... complex (PIC) formation by means of inhibitory interactions with TBP or TFIIB (16 ...
promoter (promoter proximal activators) such as Sp1, CREB, AP1, AP2, NF1, Oct-1 ...
Cited by 13 - Web Search - pubmedcentral.nih.gov - dx.doi.org - ncbi.nlm.nih.gov - all 5 versions »

Developmentally Specific Role of the CCAAT Box in Regulation of Human-Globin Gene Expression
X Fang, H Han, G Stamatoyannopoulos, Q Li - cse.unl.edu
... NF-Y (CP-1, CBF), CCAAT/enhancer- binding protein, CCAAT transcription factor/NF1,
CCAAT dis ... of gene transcription is correlated with recruitment of TBP on the ...
View as HTML - Web Search

Functional Analyses of the Human Metallothionein-IG Gene - Full text - MIT Libraries
IN VITRO, IN VIVO - Am. J. Pathol, 2003 - jbc.org
... MREa, 5`-CGTCTGCGCCCGGCCCCGTG-3`; AP1, 5`-CGCTTGATGAGTCAGCCGGAA-3`; NF1/CTF, 5 ... Binding
reactions with human TATA binding protein (TBP, Promega Biotech.) were ...
Web Search - jbc.org

Many Ways of Transcriptional Regulation in Yeast
B Pina - pubwww.srce.hr
... action would attract the mediator complex (SRB/MED) and would allow TBP to bind ...
Interestingly, NF1 is unable to bind this site in vi- tro in the reconstituted ...
View as HTML - Web Search - jagor.srce.hr - public.carnet.hr - public.srce.hr - all 6 versions »

Changes in Attitude, Changes in Latitude: Nuclear Receptors Remodeling Chromatin to Regulate …
J Chen, HK Kinyamu, TK Archer - mend.endojournals.org
... blocks the binding of transcription factors NF1, Oct1 and TBP to the promoter (Fig.
1A) ... allows NF1, OTF and TBP to bind their respective binding sites (Fig. ...
Web Search

乙型肝炎病毒表面抗原基因启动子 结构及调节研究
李强, 成军, 程明亮, 钟彦伟 - wjgnet.com
... 细 胞核因子ＮＦ１ 对激活Ｓ ... 胞基因通过结合和修饰包括ＡＰ１ ＡＰ２
ＡＴＦ２ ＣＲＥＢ ＴＢＰ ＴＦ２Ｈ ＴＦ２Ｂ ...
View as HTML - Web Search - wjgnet.com - wjgnet.com - wjgnet.com

Neuronal expression of the 5HT3 serotonin receptor gene requires nuclear factor 1 complexes - Full text - MIT Libraries
FK Bedford, D Julius, HA Ingraham - J. Neurosci, 1998 - jneurosci.org
... are boxed and labeled, including the E-Box, Pal-1, and NF1 potential DNA ... such promoters,
and Sp1 has been proposed to facilitate the recruitment of TBP and the ...
Cited by 10 - Web Search - jneurosci.org - ncbi.nlm.nih.gov

TAR and Sp1-independent transactivation of HIV long terminal repeat by the Tat protein in the …
PD Monte, MP Landini, J Sinclair, JL Virelizier, S … - AIDS, 1997 - aidsonline.com
... protein 1 (AP1), activating transcription factor 1 (ATF1) and NF1, can compensate ...
the region that interacts with TATA-binding proteins (TBP), suggesting that ...
Cited by 1 - Web Search - aidsonline.com

Glucocorticoid Receptor Domain Requirements for Chromatin Remodeling and Transcriptional Activation … - Full text - MIT Libraries
EK Keeton, TM Fletcher, CT Baumann, GL Hager, CL … - J Biol Chem, 2002 - jbc.org
... at the stable template was downstream of template derepression and NF1 binding,
and ... is the fact that the 1 domain has been shown to interact with TBP and the ...
Cited by 8 - Web Search - dx.doi.org - jbc.org - ncbi.nlm.nih.gov - all 5 versions »

The Viral Transactivator E 1 A Regulates the Mouse Mammary Tumor Virus Promoter in an Isoform- and … - Full text - MIT Libraries
E Soeth, DB Thurber, CL Smith - J Biol Chem, 2002 - jbc.org
... transcription, such as TBP (10-12) and several of the TBP-associated factors ... For
analysis of NF1 binding, nuclei were digested with HaeIII (5 units/µg of DNA ...
Cited by 2 - Web Search - jbc.org - ncbi.nlm.nih.gov

Dynamic protein-DNA architecture of a yeast heat shock promoter - Full text - MIT Libraries
C Giardina, JT Lis - Mol. Cell. Biol, 1995 - mcb.asm.org
... binding protein (TBP) with this promoter is also modulated: heat shock slightly
increases TBP binding to the promoter and this binding is reduced upon recovery ...
Cited by 48 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

YY1 is a positive regulator of transcription of the Col1a1 gene - Full text - MIT Libraries
FB Riquet, L Tan, BK Choy, M Osaki, G Karsenty, TF … - J. Biol. Chem, 2001 - intl.jbc.org
... Col1a1 gene promoter, using data derived from the crystal structures of TBP/TFIIB
(52 ... DNA bending via the YY1A site could bring factors, such as NF1, that are ...
Cited by 10 - Web Search - jbc.org - intl.jbc.org - ncbi.nlm.nih.gov - all 5 versions »

A link between increased transforming activity of lymphoma-derived MYC mutant alleles, their … - Full text - MIT Libraries
AT Hoang, B Lutterbach, BC Lewis, T Yano, TY Chou, … - Mol. Cell. Biol, 1995 - mcb.asm.org
... are as described previously: GAL4-Myc and GAL4-VP16 (42) and GAL4-NF1 (NF1 aa 220 ...
The GAL4-TBP fusion was constructed by fusing in frame full-length human TBP ...
Cited by 55 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov

Oekaryotlardaki Transkripsiyonu Duezenleyici Proteinler - Full text - MIT Libraries
ETR Proteins - Turk J Biol, 2000 - journals.tubitak.gov.tr
... hücre kültürü çalışmaları, CP1, CP2 ve CTF/NF1 olarak isimlendirilen ... Ökaryotların
tümünde bulunan TBP proteini (TATA kutusuna bağlanıcı protein ...
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Transcriptional control and the role of silencers in transcriptional regulation in eukaryotes - Full text - MIT Libraries
S Ogbourne, TM Antalis - Biochem. J, 1998 - biochemj.org
... collectively as TBP-associated factors (TAFs) [34] then bind to TBP, together making ...
of the transcription initiation site and is recognized by CTF/NF1 [70,71]. ...
Cited by 91 - Cached - Web Search - biochemj.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov