Site-specific inhibition of transcription factor binding to DNA by a metallointercalator. - Full text - MIT Libraries
DT Odom, CS Parker, JK Barton - Biochemistry, 1999 - chemistry.caltech.edu
... Indeed, the preferential recognition of sites by TBP that contain TA- rich stretches
may ... pUC19 containing the complete open reading frame of the YAP1 gene in ...
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Nucleo-cytoplasmic transport of proteins as a target for therapeutic drugs.
Y Yashiroda, M Yoshida - Current Medicinal Chemistry, 2003 - ingentaconnect.com
... 3] Kap114 import TBP (Spt15), H2A, H2B Importin 9 [3] ... 3] Crm1/Xpo1 export
NES-containing proteins, Yap1 CRM1/Exportin 1 [3,66,67] ...
Cited by 4 - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

Coupling of the Transcriptional Regulation of Glutathione Biosynthesis to the Availability of … - Full text - MIT Libraries
GL Wheeler, EW Trotter, IW Dawes, CM Grant - J Biol Chem, 2003 - jbc.org
... of the Transcriptional Regulation of Glutathione Biosynthesis to the Availability
of Glutathione and Methionine via the Met4 and Yap1 Transcription Factors* ...
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A novel, transformation-relevant activation domain in Fos proteins - Full text - MIT Libraries
M Funk, B Poensgen, W Graulich, V Jerome, R Muller - Mol Cell Biol, 1997 - mcb.asm.org
... and a domain (TATA-binding protein [TBP]-binding domain [TBD]) that interacts with
TBP and is ... 10 ochre leu2- 1 trp 63 his3 200 ura3 gcn4::HIS3 yap1::ura3::HCTRE ...
Cited by 7 - Web Search - pubmedcentral.nih.gov - mcb.asm.org - ncbi.nlm.nih.gov - all 5 versions »

YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae - Full text - MIT Libraries
T Nevitt, J Pereira, C Rodrigues-Pousada - Yeast, 2004 - doi.wiley.com
... S. cerevisiae strains used in this study are listed in Table 1. The complete coding
regions of the YAP1, YAP4 and SKO1 genes were deleted by the microhomology ...
Cited by 1 - Web Search - ncbi.nlm.nih.gov

The yeast stress response - Full text - MIT Libraries
C Rodrigues-Pousada, T Nevitt, R Menezes - FEBS J, 2005 - content.febsjournal.org
... Rodrigues-Pousada C & Toledano MB (2003) Two redox centers within Yap1 for H ... 1997)
Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP. ...
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Cluster, function and promoter: analysis of yeast expression array - Full text - MIT Libraries
J Zhu, MQ Zhang - Pacific Symposium on Biocomputing, 2000 - helix-web.stanford.edu
... Mating SWI5 WACCAKY Cell cycle control UME6 WCGGCGGCWA Nitrogen repression and
induction of meiosis YAP1 TTACTAA Oxidative stress response TBP TATAWAW TATA ...
Cited by 27 - View as HTML - Web Search - nslij-genetics.org - linkage.rockefeller.edu - cbi.pku.edu.cn - all 13 versions »

Identification of Limiting Steps for Efficient Trans-activation of HIV-1 Promoter by Tat in … - Full text - MIT Libraries
L Daviet, F Bois, PL Battisti, A Gatignol - J Biol Chem, 1998 - jbc.org
... functional requirements correlate with physical interactions of Tat with Sp1, TBP,
and RNA ... in yeast, but AP1 binding sites are recognized by GCN4 and YAP1 (80 ...
Cited by 3 - Web Search - jbc.org - ncbi.nlm.nih.gov

Predicting Genetic Regulatory Response Using Classification
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - Arxiv preprint q-bio.QM/0411028, 2004 - arxiv.org
... heat-shock), RAP1 (heat- shock and osmolarity), TBP (TATA binding ... Pol- I transcription
termination activity), GAL4 (galactose metabolism), YAP1 (peroxide stress ...
Cited by 10 - View as HTML - Web Search - cs.princeton.edu - math.biu.ac.il - cs.utsa.edu - all 14 versions »

Paracoccidioides brasiliensis RNA biogenesis apparatus revealed by functional genome analysis - Full text - MIT Libraries
P Albuquerque, AJ Baptista, L da Silveira … - Genet. Mol. Res, 2005 - funpecrp.com.br
... Comparisons made with the S. cerevisiae genome have revealed orthologs to TBP, and
at least one ... Stress response Skn7, Ask10, Yap1, Bcy1 2533, 1104, 1731, 947 ...
Web Search - funpecrp.com.br

Transcriptional Activation of Metalloid Tolerance Genes in Saccharomyces cerevisiae Requires the AP- … - Full text - MIT Libraries
R Wysocki, PK Fortier, E Maciaszczyk, M Thorsen, A … - Mol Biol Cell, 2004 - molbiolcell.org
... Yap1p is crucial for oxidative stress tolerance in yeast; YAP1 ... LEU2 marker. The
GFP-YAP1 fusion plasmid was kindly provided by SW Moye-Rowley Page 7. 7 ...
Cited by 3 - Web Search - molbiolcell.org - pubmedcentral.nih.gov - intl.molbiolcell.org - all 8 versions »

BIOINFORMATICS - Full text - MIT Libraries
M Middendorf, A Kundaje, C Wiggins, Y Freund, C … - BIOINFORMATICS, 2004 - bioinformatics.oupjournals.org
Page 1. VOLUME 20 SUPPLEMENT 1 4 AUGUST 2004 PAGES i232–i240 BIOINFORMATICS
Electronic edition http://bioinformatics.oupjournals.org ...
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Oxygen Club OF California
C Santa Barbara - oxyclubcalifornia.org
Page 1. O XYGEN C LUB OF C ALIFORNIA 2004 O XIDANTS AND A NTIOXIDANTS IN B IOLOGY
C O -S PONSORED BY THE L INUS P AULING I NSTITUTE B OOK OF A BSTRACTS ...
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The NuA4 transcription activation/histone H4 acetyltransferase complex contains the essential Esa1 …
S Allard, RT Utley, J Savard, A Clarke, P Grant, … - Biochem. Cell Biol, 1999 - article.pubs.nrc-cnrc.gc.ca
... Initiation of mRNA synthesis by RNA polymerase II (RNAPII) minimally requires a
set of five general initiation factors including TBP, TFIIB, TFIIF, TFIIE, and ...
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Bioassay of Pesticide Lindane Using Yeast-DNA Microarray Technology - Full text - MIT Libraries
M Parveen, Y Momose, E Kitagawa, S Kurita, O … - Chem-Bio Informatics Journal, 2003 - cbi.or.jp
... These two genes are targeted by the transcriptional factor YAP1. YAP1
is induced in response to oxidative or other stresses and ...
Cited by 1 - Web Search - cbi.or.jp - csa.com

Diazaborine Treatment of Yeast Cells Inhibits Maturation of the 60S Ribosomal Subunit - Full text - MIT Libraries
B Pertschy, G Zisser, H Schein, R Koeffel, G Rauch … - Mol Cell Biol, 2004 - pubmedcentral.nih.gov
... pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1. ...
gene in yeast, encodes a new member of the Sec18p, Pas1p, Cdc48p, TBP-1 family ...
Web Search - mcb.asm.org - ncbi.nlm.nih.gov

A Review of Phenotypes in Saccharomyces cerevisiae - Full text - MIT Libraries
M Hampsey - Yeast, 1997 - doi.wiley.com
Page 1. YEAST VOL. 13: 1099–1133 (1997) A Review of Phenotypes in
Saccharomyces cerevisiae MICHAEL HAMPSEY 1 * 1 Department of ...
Cited by 80 - Web Search - doi.wiley.com - ncbi.nlm.nih.gov

Inferring gene regulatory relationships by combining target-target pattern recognition and regulator … - Full text - MIT Libraries
H Wei, Y Kaznessis - Biotechnology and Bioengineering, 2005 - doi.wiley.com
... The expression profiles of four groups of KTGs that are under the control of four
example regulators, ACE2, YAP1, GCN4 and MCM1, are shown in A1, A2, A3, and ...
Cited by 1 - Web Search - cems.umn.edu - cems.umn.edu - ncbi.nlm.nih.gov - all 5 versions »

12 Gene Expression in Yeast
R SRP - biochemie.web.med.uni-muenchen.de
... Genetic and biochemical results suggested [Keys et al., 1996] that the minimum
requirements for active Pol I transcription include TBP, Rrn3 (a small RNA ...
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Protein phosphatase type 1 interacts with proteins required for meiosis and other cellular processes … - Full text - MIT Libraries
J Tu, W Song, M Carlson - Mol. Cell. Biol, 1996 - mcb.asm.org
Page 1. M OLECULAR AND C ELLULAR B IOLOGY , Aug. 1996, p. 4199–4206 Vol. 16, No.
8 0270-7306/96/$04.00 0 Copyright 1996, American Society for Microbiology ...
Cited by 49 - Web Search - mcb.asm.org - pubmedcentral.nih.gov - ncbi.nlm.nih.gov - all 5 versions »

Compilation of sequence-specific DNA-binding proteins implicated in transcriptional control in fungi - Full text - MIT Libraries
SS Dhawale, AC Lane - Nucleic Acids Res, 1993 - pubmedcentral.nih.gov
... [PubMed]; Schnell N, Krems B, Entian KD. The PAR1 (YAP1/SNQ3) gene of Saccharomyces
cerevisiae, a c-jun homologue, is involved in oxygen metabolism. ...
Cited by 24 - Web Search - ncbi.nlm.nih.gov

Gene regulation during morphogenesis in Candida albicans
AJP Brown, CJ Barelle, S Budge, J Duncan, S Harris … - Contrib. Microbiol, 2000 - content.karger.com
... Also, since Cap1p complements S. cerevisiae yap1 mutants [47], Cap1p presum- ably
activates ... P, Carter PE, Brown AJP: The TATA-binding protein (TBP) from the ...
Cited by 8 - Web Search - content.karger.com - ncbi.nlm.nih.gov - Get it from MIT Libraries

A Statistical Method for Constructing Transcriptional Regulatory Networks Using Gene Expression and … - Full text - MIT Libraries
B Xing, MJ van der Laan - Journal of Computational Biology, 2005 - dx.doi.org
Page 1. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 12, Number 2, 2005 © Mary Ann Liebert,
Inc. Pp. 229–246 A Statistical Method for Constructing Transcriptional ...
Cited by 3 - Web Search - liebertonline.com - bepress.com - ideas.repec.org - all 7 versions »

The PX domain protein interaction network in yeast - Full text - MIT Libraries
CS Vollert, P Uetz, F Karlsruhe - J. Cell Sci, 2005 - mcponline.org
... a suppressor of a TBP deletion and thus likely a transcription factor
(although its biochemical function is unknown). Mvp1p also ...
Web Search - mcponline.highwire.org - mcponline.org - mcponline.org

Inaugural-Dissertation
B Tebarth - ulb.uni-duesseldorf.de
Page 1. Regulation der Expression des EFG1-Gens in der Morphogenese des
humanpathogenen Pilzes Candida albicans I NAUGURAL -D ISSERTATION zur ...
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UC Berkeley Division of Biostatistics Working Paper Series
CT Regulatory - bepress.com
Page 1. UC Berkeley Division of Biostatistics Working Paper Series Year 2005 Paper
169 A Causal Inference Approach for Constructing Transcriptional Regulatory ...
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[BOOK] Redox regulation of cell signaling and its clinical application
L Packer, J Yodoi - 1999 - print.google.com
Page 1. Redox ulatioD o'f(eII Si in aod Its (Iloical flpplicatioo ThisOne -KNY
IIIIIIIIIU Page 2. OXJDATIVE STRESS AND DISEASE Series Editors ...
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