Genes that co-cluster with estrogen receptor alpha in microarray analysis of breast biopsies
MA Dressman, TM Walz, C Lavedan, L Barnes, S … - Pharmacogenomics J, 2001 - nature.com
... Interest- ingly, four of the genes present in the ESR1 branch described here, LIV1,
HPN, XBP1 and HNF3A were identified as mem- bers of a luminal epithelial ...
Cited by 13 - Web Search - nature.com - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov - Get it from MIT Libraries

About GATA3, HNF3A and XBP1, three genes co-expressed with the oestrogen receptor-a gene (ESR1) in …
M Lacroix, G Leclercq - Molecular and Cellular Endocrinology, 2004 - geocities.com
... use, have shown that the expression of 25 GATA3, HNF3A (also known as FOXA1), and
XBP1 is 26 strongly and positively correlated to that of ESR1 (Hoch 27 et al ...
Cited by 3 - View as HTML - Web Search - ncbi.nlm.nih.gov - Get it from MIT Libraries

Blind Source Separation and the Analysis of Microarray Data - Full text - MIT Libraries
P Chiappetta, MC Roubaud, B Torresani - Journal of Computational Biology, 2004 - dx.doi.org
Page 1. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 11, Number 6, 2004 © Mary Ann Liebert,
Inc. Pp. 1090–1109 Blind Source Separation and the Analysis of ...
Cited by 1 - Web Search - liebertonline.com - cmi.univ-mrs.fr - ncbi.nlm.nih.gov - all 5 versions »

Gene expression profiles of poor-prognosis primary breast cancer correlate with survival - Full text - MIT Libraries
F Bertucci, V Nasser, S Granjeaud, F Eisinger, J … - Human Molecular Genetics, 2002 - hmg.oupjournals.org
... Subtypes of ER-positive breast tumours have recently been reported by others using
discriminator genes such as ESR1, GATA3, XBP1 or MYB, also present in our ...
Cited by 41 - Web Search - hmg.oupjournals.org - ncbi.nlm.nih.gov

GraphExplore: a software tool for network visualization
Q Wang, G Yao, J Nevins, M West, A Dobra - isds.duke.edu
... α gene (ESR1) together with three other genes (GATA3, FOXA1/HNF3A, XBP1) that are
known to have expression levels strongly correlated with ESR1 (Lacroix and ...
View as HTML - Web Search - stat.duke.edu

[PS] Classification mixte pour l’analyse de donnees d’expression
P Chiappetta, MC Roubaud, B Torresani - Proc. JOBIM’02, 2002 - cmi.univ-mrs.fr
... Le gène ESR1 est regroupé avec les gènes ANG, C4A, EGF, GLI3, MUC1, KRT19, BCL2,
GATA3, ILF1, MYB, SMARCA2, THBS1, VIL2, XBP1, IGFBP2, AMFR, PLAT,FOS. ...
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Separation de Sources pour l’Analyse de Donnees d’Expression
P Chiappetta, MC Roubaud, B Torresani - irisa.fr
... Le premier groupe (ESR1, GATA3, XBP1...) corrobore les résultats précédemment obtenus
sur le même jeu de données [5], ainsi que d’autres résultats ...
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Conservation of Breast Cancer Molecular Subtypes and Transcriptional Patterns of Tumor Progression … - Full text - MIT Libraries
K Yu, CH Lee, PH Tan, P Tan - Clinical Cancer Research, 2004 - clincancerres.aacrjournals.org
... the Asian-Chinese population within the Caucasian data set, after removal of several
well-known ER marker genes (ie, ESR1, GATA3, TFF1, TFF3, XBP1, MYB, IGFR1 ...
Cited by 1 - Web Search - clincancerres.aacrjournals.org - ncbi.nlm.nih.gov

MINI REVIEW BREAST CANCER REVISITED USING DNA ARRAY-BASED GENE EXPRESSION PROFILING - Full text - MIT Libraries
F Bertucci, P Viens, P Hingamp, V Nasser, R … - Int. J. Cancer, 2003 - doi.wiley.com
... ERBB2 erb-b2 Tyrosine kinase receptor nd Poor Poor na ESR1 Estrogen receptor
1 nd Good Good na ... XBP1 X-box binding protein 1 nd Good Good nt ...
Cited by 22 - Web Search - ncbi.nlm.nih.gov

Classifying the estrogen receptor status of breast cancers by expression profiles reveals a poor … - Full text - MIT Libraries
Y Kun, LC How, TP Hoon, VB Bajic, TS Lam, A … - Human Molecular Genetics, 2003 - hmg.oupjournals.org
... specific. For example, ESR1 and IGFR1 were only perturbed in the ER+ samples,
while XBP1 was only perturbed in the ER- samples. Finally ...
Cited by 4 - Web Search - sdmc.i2r.a-star.edu.sg - ingentaconnect.com - ncbi.nlm.nih.gov - all 8 versions »

Graphical model-based gene clustering and metagene expression analysis
A Dobra, Q Wang, M West - 2004 - isds.duke.edu
Page 1. A. Dobra et al. Graphical model-based gene clustering and metagene
expression analysis Adrian Dobra, Quanli Wang and Mike West ...
Cited by 1 - View as HTML - Web Search - stat.duke.edu - stat.duke.edu - isds.duke.edu - all 5 versions »

Gene expression profiling identifies molecular subtypes of inflammatory breast cancer - Full text - MIT Libraries
F BERTUCCI, P FINETTI, J ROUGEMONT, E Charafe- … - Cancer Res, 2005 - cancerres.aacrjournals.org
... signatures corresponding to defined biological processes or cell types: the "estrogen
receptor (ER) cluster," including ESR1, GATA3, XBP1, HNF3A, MUC1, and ...
Cited by 1 - Web Search - cancerres.aacrjournals.org - ncbi.nlm.nih.gov

Gene expression profiling for molecular characterization of inflammatory breast cancer and … - Full text - MIT Libraries
F Bertucci, P Finetti, J Rougemont, E Charafe- … - Cancer Res, 2004 - cancerres.aacrjournals.org
... cluster with a prominent role in the classification of samples included ESR1, which
codes for ER- , several transcription factor genes (GATA3, XBP1, ILF1, GLI3 ...
Cited by 4 - Web Search - cancerres.aacrjournals.org - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

BMC Genomics - Full text - MIT Libraries
MC Abba, Y Hu, H Sun, JA Drake, S Gaddis, K … - BMC Genomics, 2005 - biomedcentral.com
... receptor 1 (ESR1), GATA-bind- ing protein 3 (GATA3), mucin 1 (MUC1), v-myb-myeloblast-
osis viral oncogene homolog (C-MYB) , X-box-binding protein 1 (XBP1), ...
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Cancer Genomics and Development of Diagnostic Tools and Therapies
A Report - ctrf-cagenomics.vcu.edu
Page 1. Commonwealth Technology Research Fund Sponsored Project Title: Cancer
Genomics and Development of Diagnostic Tools and Therapies ...
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Gene expression signature of estrogen receptor α status in breast cancer - Full text - MIT Libraries
M Abba, Y Hu, H Sun, J Drake, S Gaddis, K Baggerly … - BMC Genomics, 2005 - biomedcentral.com
... 1 (ESR1), GATA-binding protein 3 (GATA3), mucin 1 (MUC1), v-myb-myeloblastosis viral
oncogene homolog (C-MYB) , X-box-binding protein 1 (XBP1), hydroxysteroid ...
Cached - Web Search - dx.doi.org - pubmedcentral.nih.gov - citebase.eprints.org - all 7 versions »

Bayesian Covariance Selection
A Dobra, M West - 2004 - isds.duke.edu
Page 1. Bayesian Covariance Selection ∗ Adrian Dobra Duke University, Durham,
NC 27708, adobra@isds.duke.edu Mike West Duke University ...
Cited by 1 - View as HTML - Web Search - uam.es - isds.duke.edu - stat.duke.edu - all 5 versions »

Sparse graphical models for exploring gene expression data
A Dobra, C Hans, B Jones, JR Nevins, M West - J. Multiv. Anal, 2004 - samsi.info
Page 1. Technical Report #2003-7 October 23, 2003 Statistical and Applied Mathematical
Sciences Institute PO Box 14006 Research Triangle Park, NC 27709-4006 ...
Cited by 18 - View as HTML - Web Search - stat.duke.edu - stat-ftp.berkeley.edu - portal.acm.org - all 9 versions »

Stable ‘portrait’of breast tumors during progression: data from biology, pathology and genetics
M Lacroix, RA Toillon, G Leclercq - Endocrine-Related Cancer, 2004 - erc.endocrinology-journals.org
... Other genes correlated to ESR1 expression were BCL2, COX6C, CRABP2, ERBB3, FBP1,
HNF3A, HPN, IGFBP2, IGFBP5, MYB, NAT1, SELENBP1, VAV3 and XBP1 (Perou et al. ...
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Molecular Identification of ERa-Positive Breast Cancer Cells by the Expression Profile of an … - Full text - MIT Libraries
A WEISZ, W BASILE, C SCAFOGLIO, L ALTUCCI, F … - JOURNAL OF CELLULAR PHYSIOLOGY, 2004 - doi.wiley.com
... 3 (GATA3), estrogen regulated LIV-1 protein (LIV-1) and/or ERa (ESR1) genes, which ...
1b (Table 1: ASAH, CEACAM5, ERBB2, LIV-1, MGP, SCNN1A, TFF3, XBP1) and eight ...
Cited by 1 - Web Search - ncbi.nlm.nih.gov - ncbi.nlm.nih.gov

Basal and luminal breast cancers: basic or luminous?(review). - Full text - MIT Libraries
D BIRNBAUM, F BERTUCCI, C GINESTIER, R TAGETT, J … - INTERNATIONAL JOURNAL OF ONCOLOGY, 2004 - 147.52.72.117
... genes of the signature are listed on the right (ESR1, estrogen receptor ... transcription
factors (eg GATA3, XBP1, ETS-like factors…) were found consistently ...
Cited by 2 - View as HTML - Web Search - ncbi.nlm.nih.gov

Genome-wide gene-expression profiles of breast-cancer cells purified with laser microbeam … - Full text - MIT Libraries
T NISHIDATE, T KATAGIRI, ML LIN, Y MANO, Y MIKI, F … - INTERNATIONAL JOURNAL OF ONCOLOGY, 2004 - 147.52.72.117
Page 1. Abstract. Breast carcinoma is a complex disease charac- terized
by accumulation of multiple genetic alterations, and the ...
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Relevance of Breast Cancer Cell Lines as Models for Breast Tumours: An Update - Full text - MIT Libraries
M Lacroix, G Leclercq - Breast Cancer Research and Treatment, 2004 - springerlink.com
... The importance of oestrogen receptor-alpha (gene ESR1) and Her-2/neu (ERBB2) as
classifiers for cell lines and tumours is under- lined. ... g ESR1 mRNA present. ...
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Chromosome-Wide Mapping of Estrogen Receptor Binding Reveals Long-Range Regulation Requiring the … - Full text - MIT Libraries
AS Brodsky, W Li, J Eeckhoute, W Shao, EA Fox, PA … - Cell, 2005 - research.dfci.harvard.edu
Page 1. Cell, Vol. 122, 33–43, July 12, 2005, Copyright ©2005 by Elsevier Inc. DOI
10.1016/j.cell.2005.05.008 Chromosome-Wide Mapping of Estrogen Receptor ...
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