Summary of results
Parameters
threshold = low FN
maxd = 25, 50, 200 bp
species = hs
conserved binding sites
    total n   % of each pattern hs[1]   % of each pattern mm[2]   Chi2 test[3] expression p value[4] TSS position bias[5] order p value (binomial) maxd[6]
name 1[7] name 2[8] hs mm 5'-3' 3'-5' 3'-3' 5'-5' 5'-3' 3'-5' 3'-3' 5'-5' p hs p mm hs mm hs mm hs mm hs mm
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
CEBP SRY 7971 9023 22% 22% 31% 25% 22% 21% 32% 25% <1E-16 <1E-16              25 50 200 25
CEBP LYF1 5499 5612 27% 29% 22% 22% 27% 27% 23% 23% <1E-16 9.80E-08              25 50 200  25 50
CEBP PAX4 7728 7419 23% 20% 35% 22% 22% 18% 37% 23% <1E-16 <1E-16     *        25 50 200 25
FOXJ2 PBX1 6386 6158 29% 28% 22% 21% 30% 29% 20% 21% <1E-16 <1E-16              25 50 200 25
FOXJ2 HFH3 4787 5708 16% 16% 34% 34% 14% 13% 38% 35% <1E-16 <1E-16 ****            25 50 200 25
FOXJ2 FOXD3 4907 5791 19% 19% 30% 31% 17% 16% 33% 34% <1E-16 <1E-16 ****            25 50 200 25
FOXJ2 SRY 6687 8688 31% 31% 19% 19% 35% 34% 16% 16% <1E-16 <1E-16              25 50 200 25
FOXJ2 PAX4 5029 5338 32% 26% 21% 22% 33% 27% 19% 21% <1E-16 <1E-16 ****            25 50 200 25
FOXJ2 GKLF 3525 3883 32% 28% 21% 20% 34% 27% 19% 20% <1E-16 <1E-16 ****            25 50 200 25
CEBPB CEBPB 12878 7604 23% 23% 27% 27% 23% 23% 28% 27% <1E-16 1.90E-15              25 50 200 25
CEBPB CEBP 23494 7097 27% 26% 24% 23% 27% 28% 23% 22% <1E-16 8.90E-16              25 50 200 25
CEBPB MZF1 7105 6800 29% 28% 22% 22% 28% 28% 22% 22% <1E-16 <1E-16     ** *      25 50 200 25
CEBPB PAX4 6794 6547 24% 22% 32% 21% 24% 21% 31% 24% <1E-16 <1E-16              25 50 200  25 50
CEBPB GKLF 5734 5500 30% 27% 22% 20% 28% 28% 22% 21% <1E-16 <1E-16              25 50 200 25
CEBPB SP1 4336 4293 29% 29% 21% 21% 29% 27% 22% 23% <1E-16 4.30E-13 ****   **** ****      25 50 200  25 50
TST1 MZF1 4997 5009 27% 29% 21% 23% 28% 28% 21% 23% <1E-16 2.20E-13 ****   **** ****      25 50 25
TST1 GKLF 4893 4549 28% 30% 21% 22% 27% 29% 22% 22% <1E-16 7.30E-15 ****            25 50 25
AP2 SP1 20606 14676 23% 22% 28% 27% 22% 21% 30% 27% <1E-16 <1E-16     *        25 50 25
AP2 GATA3 6954 6621 23% 21% 28% 28% 23% 23% 27% 28% <1E-16 1.50E-12     **** ****      25 50 25
AP2 RREB1 3480 2035 29% 32% 17% 21% 30% 34% 16% 20% <1E-16 <1E-16 ****   **** ****      25 50 200 25
AP2 P300 10684 8135 23% 22% 29% 26% 22% 22% 29% 26% <1E-16 <1E-16     **** ****      25 50 25
AP2 MZF1 16840 11983 22% 22% 29% 27% 21% 21% 31% 27% <1E-16 <1E-16     *** ****      25 50 25
AP2 GATA1 13280 10660 24% 22% 28% 26% 24% 22% 29% 25% <1E-16 <1E-16     **** ****      25 50 25
AP2 LYF1 9883 7296 22% 23% 28% 27% 23% 21% 29% 28% <1E-16 <1E-16     **** ****      25 50 25
AP2 PAX4 3721 3501 20% 38% 18% 24% 20% 39% 17% 24% <1E-16 <1E-16 ****   ** *      25 50 200 25
AP2 GKLF 7811 5825 22% 21% 29% 29% 21% 21% 29% 29% <1E-16 <1E-16     * ****      25 50 200 25
CDPCR1 TATA 4963 5113 24% 23% 31% 22% 24% 23% 32% 22% <1E-16 <1E-16              25 50 25
CDPCR1 CDPCR3HD 5234 5942 29% 29% 21% 21% 29% 29% 21% 21% <1E-16 <1E-16              25 50 200 25
HNF1 AML1 4290 4987 22% 38% 19% 21% 23% 37% 18% 22% <1E-16 <1E-16 ****            25 50 200  25 50
HNF1 SRY 8026 8696 23% 21% 30% 25% 22% 21% 30% 27% <1E-16 <1E-16              25 50 200  25 50
NFY SP1 10056 6115 24% 22% 28% 26% 24% 22% 29% 25% <1E-16 3.40E-15     **** ***      25 50 200 25
NFY MZF1 6548 6437 22% 21% 30% 27% 23% 22% 29% 26% <1E-16 <1E-16     * *      25 50 200  25 50
NFY PAX4 4439 4327 25% 31% 22% 21% 26% 32% 19% 23% <1E-16 <1E-16 ****   *        25 50 200 25
LMO2COM SP1 4548 4991 29% 29% 20% 22% 28% 29% 22% 21% <1E-16 <1E-16 ****   **** ****      25 50 200 25
LMO2COM GATA2 6343 8101 29% 28% 20% 22% 28% 28% 22% 22% <1E-16 <1E-16              25 50 200 25
LMO2COM GATA3 6582 8459 30% 30% 20% 20% 29% 30% 21% 20% <1E-16 <1E-16              25 50 200 25
LMO2COM MZF1 7021 7806 29% 29% 21% 21% 28% 29% 21% 22% <1E-16 <1E-16       *      25 50 200 25
LMO2COM PAX4 10035 6975 23% 22% 27% 28% 23% 22% 27% 28% <1E-16 1.10E-16       *      25 50 200  25 50
LMO2COM GKLF 4864 5553 31% 29% 20% 20% 29% 30% 20% 20% <1E-16 <1E-16 ****            25 50 200 25
MEIS1 TGIF 3873 5773 21% 21% 31% 28% 21% 21% 31% 27% <1E-16 <1E-16 ****            25 50 200 25
RFX1 GKLF 4710 5062 27% 29% 21% 23% 27% 29% 23% 21% <1E-16 <1E-16 ****   *        25 50 200 25
PAX6 SRY 7673 8846 22% 22% 30% 25% 21% 21% 31% 27% <1E-16 <1E-16     **** ****      25 50 25
PAX6 PAX4 6356 6623 23% 22% 31% 24% 22% 23% 31% 24% <1E-16 <1E-16              25 50 25
PAX6 GKLF 5430 5971 23% 20% 30% 26% 22% 21% 30% 27% <1E-16 <1E-16              25 50 200 25
TATA CDPCR3HD 5157 5393 23% 22% 33% 21% 22% 23% 33% 22% <1E-16 <1E-16              25 50 25
USF COUP 2894 3686 23% 21% 34% 23% 23% 21% 35% 21% <1E-16 <1E-16 ****   **** ****      25 50 25
USF MEIS1A/HOXA9 6840 9124 22% 21% 35% 22% 21% 23% 34% 23% <1E-16 <1E-16     **** ****      25 50 200  25 50
USF PAX4 3478 4298 21% 32% 20% 27% 20% 32% 20% 29% <1E-16 <1E-16 ****   **** *      25 50 200 25
PBX1 NFAT 7024 6455 27% 28% 22% 23% 28% 27% 22% 23% <1E-16 6.70E-16              25 50 25
PBX1 HFH3 5693 5760 20% 22% 30% 28% 20% 18% 33% 29% <1E-16 <1E-16              25 50 200 25
PBX1 FOXD3 5638 5619 22% 21% 28% 29% 21% 17% 30% 31% <1E-16 <1E-16              25 50 200 25
PBX1 SRY 6622 7496 31% 29% 19% 21% 31% 32% 17% 20% <1E-16 <1E-16     *        25 50 200 25
PBX1 PAX4 5844 5661 37% 23% 19% 21% 39% 24% 18% 20% <1E-16 <1E-16              25 50 200 25
PBX1 GKLF 3834 3740 31% 28% 20% 21% 36% 25% 20% 19% <1E-16 <1E-16 ****            25 50 200 25
YY1 MZF1 6230 6857 20% 20% 31% 28% 21% 20% 31% 28% <1E-16 <1E-16              25 50 200 25
YY1 PAX4 5381 6042 27% 31% 21% 21% 26% 30% 23% 21% <1E-16 <1E-16              25 50 200  25 50
YY1 SP1 4082 4343 21% 21% 32% 27% 21% 21% 32% 27% <1E-16 <1E-16 ****   **** ****      25 50 200 25
YY1 P300 7327 4950 23% 22% 29% 26% 23% 21% 28% 28% <1E-16 2.00E-14              25 50 200  25 50
YY1 GKLF 4333 5015 21% 20% 32% 28% 21% 20% 29% 30% <1E-16 <1E-16 ****            25 50 200 25
COUP TCF11 4179 5501 17% 17% 49% 16% 18% 18% 47% 18% <1E-16 <1E-16 ****            25 50 200 25
NFAT SP1 5769 5713 28% 29% 21% 22% 30% 29% 20% 21% <1E-16 <1E-16     **** ****      25 50 200 25
NFAT AREB6 7711 8509 22% 22% 27% 28% 22% 23% 27% 28% <1E-16 <1E-16     *        25 50 200 25
NFAT HNF4 8912 9682 29% 27% 22% 22% 29% 27% 22% 22% <1E-16 <1E-16              25 50 200 25
NFAT FOXD3 5526 5573 22% 22% 27% 29% 21% 21% 29% 29% <1E-16 <1E-16              25 50 25
NFAT GATA3 8170 8872 28% 28% 22% 22% 27% 27% 23% 22% <1E-16 3.30E-16              25 50 200  25 50
NFAT SRY 7934 8660 30% 27% 21% 21% 30% 28% 21% 21% <1E-16 <1E-16     **** ****      25 50 200 25
NFAT ELK1 8350 8940 29% 28% 21% 22% 29% 28% 22% 21% <1E-16 <1E-16     *** **      25 50 200 25
NFAT P300 5645 6131 28% 28% 22% 22% 27% 28% 23% 22% <1E-16 8.60E-13     *        25 50 200  25 50
NFAT MZF1 8692 8621 29% 30% 20% 20% 29% 30% 20% 21% <1E-16 <1E-16     *        25 50 200 25
NFAT IK1 8128 8135 28% 29% 22% 21% 28% 28% 22% 22% <1E-16 <1E-16              25 50 200 25
NFAT PAX4 7319 7049 36% 22% 19% 23% 37% 23% 18% 22% <1E-16 <1E-16              25 50 200 25
NFAT GKLF 6613 6549 32% 31% 19% 18% 32% 31% 19% 18% <1E-16 <1E-16              25 50 200 25
SOX9 SOX5 6710 7663 31% 31% 19% 19% 31% 31% 19% 19% <1E-16 <1E-16              25 50 200 25
CEBP GKLF 4688 4713 29% 29% 21% 20% 27% 30% 21% 22% <1E-16 <1E-16 ****            25 50 200 25
P53 TCF11 6546 8811 21% 22% 35% 22% 22% 23% 34% 22% <1E-16 <1E-16              25 50 200  25 50
P53 MZF1 8461 8256 22% 23% 27% 28% 21% 24% 26% 29% <1E-16 <1E-16              25 50 25
CREL RREB1 1828 1596 25% 21% 35% 19% 26% 19% 35% 20% <1E-16 <1E-16 ****            25 50 25
CREL GKLF 6054 5996 20% 26% 25% 29% 20% 26% 25% 29% <1E-16 <1E-16       **      25 50 25
SP1 GATA2 5806 6080 29% 28% 21% 22% 29% 28% 21% 21% <1E-16 <1E-16     **** ****      25 50 25
SP1 AREB6 4296 3745 20% 20% 31% 29% 20% 19% 32% 29% <1E-16 <1E-16 ****   * *      25 50 200 25
SP1 HNF4 9557 8860 29% 28% 21% 22% 30% 27% 21% 22% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 GATA3 6105 6419 31% 31% 18% 19% 31% 30% 19% 19% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 SP1 15471 11949 32% 32% 18% 19% 34% 34% 15% 17% <1E-16 <1E-16              25 50 200 25
SP1 AML1 5667 5285 29% 30% 20% 21% 29% 30% 20% 21% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 RREB1 2978 2151 15% 16% 36% 33% 12% 12% 42% 34% <1E-16 <1E-16 ****   **** ****      25 50 200 25
SP1 ELK1 13601 11761 27% 28% 23% 22% 27% 28% 22% 22% <1E-16 <1E-16     **** *      25 50 200 25
SP1 P300 8937 7611 32% 30% 18% 20% 32% 30% 19% 20% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 MZF1 14745 11825 32% 32% 18% 19% 34% 33% 16% 17% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 CMYB 8585 7841 28% 28% 23% 21% 27% 28% 24% 21% <1E-16 <1E-16     **** ****      25 50 200  25 50
SP1 GATA1 11018 9640 29% 29% 21% 21% 30% 29% 21% 21% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 IK1 10185 8368 30% 29% 20% 21% 31% 29% 20% 20% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 LYF1 8652 7287 30% 33% 19% 19% 30% 33% 18% 18% <1E-16 <1E-16     **** ****      25 50 200 25
SP1 PAX4 2959 3218 23% 22% 22% 33% 20% 22% 23% 35% <1E-16 <1E-16 ****   **** **      25 50 200 25
SP1 GKLF 7203 6512 33% 35% 14% 17% 33% 38% 14% 15% <1E-16 <1E-16 ****   **** ****      25 50 200 25
MEIS1A/HOXA9 AP4 7286 9270 23% 24% 30% 22% 23% 24% 30% 23% <1E-16 <1E-16              25 50 25
MEIS1A/HOXA9 TCF11 12105 15312 16% 16% 50% 17% 18% 17% 48% 17% <1E-16 <1E-16              25 50 200 25
MEIS1A/HOXA9 MSX1 7943 9642 23% 30% 24% 23% 23% 30% 23% 24% <1E-16 <1E-16              25 50 25
MEIS1A/HOXA9 NKX25 6391 7854 22% 30% 26% 21% 22% 29% 27% 23% <1E-16 <1E-16              25 50 25
HSF1 CP2 7004 8232 24% 30% 23% 24% 24% 28% 23% 24% <1E-16 3.80E-12              25 50 25
HSF1 GKLF 5991 6535 25% 32% 19% 24% 26% 32% 20% 23% <1E-16 <1E-16              25 50 25
AP4 PAX4 3766 4401 22% 33% 19% 27% 20% 33% 18% 29% <1E-16 <1E-16 ****            25 50 200 25
HFH3 FOXD3 4489 5686 32% 32% 18% 18% 35% 36% 15% 14% <1E-16 <1E-16 ****            25 50 200 25
HFH3 SRY 6052 8768 18% 18% 32% 33% 13% 14% 36% 36% <1E-16 <1E-16 ****            25 50 200 25
HFH3 PAX4 4743 5245 19% 20% 37% 24% 17% 20% 40% 24% <1E-16 <1E-16 ****            25 50 200 25
HFH3 GKLF 3107 3514 21% 20% 32% 28% 18% 20% 36% 26% <1E-16 <1E-16 ****            25 50 200 25
1-Oct 1-Oct 9485 8580 28% 28% 23% 22% 28% 28% 22% 22% <1E-16 <1E-16              25 50 200 25
1-Oct SRY 7792 8172 29% 27% 22% 22% 28% 28% 22% 22% <1E-16 <1E-16              25 50 25
1-Oct PAX4 6469 6243 30% 25% 23% 23% 30% 25% 22% 22% <1E-16 <1E-16              25 50 25
1-Oct GKLF 4939 4870 29% 29% 20% 21% 31% 28% 20% 21% <1E-16 <1E-16 ****            25 50 200 25
GATA2 GATA3 7030 9136 29% 30% 20% 21% 28% 29% 22% 21% <1E-16 <1E-16              25 50 200 25
GATA2 RREB1 1277 1315 21% 18% 35% 26% 19% 22% 34% 25% <1E-16 1.80E-14 ****            25 50 25
GATA2 MZF1 8222 8954 29% 28% 21% 22% 28% 29% 22% 21% <1E-16 <1E-16              25 50 200 25
GATA2 PAX4 6934 8116 23% 22% 27% 28% 23% 22% 28% 27% <1E-16 <1E-16              25 50 25
GATA2 GKLF 5568 6429 30% 29% 21% 20% 28% 31% 21% 20% <1E-16 <1E-16              25 50 200 25
AREB6 GATA3 3402 4129 21% 21% 29% 29% 21% 22% 28% 29% <1E-16 <1E-16 ****            25 50 200 25
AREB6 SRY 5782 7626 21% 22% 28% 28% 20% 20% 30% 29% <1E-16 <1E-16     **** ****      25 50 200 25
AREB6 ELK1 4542 5058 21% 23% 28% 29% 21% 23% 28% 28% <1E-16 3.30E-16 ****            25 50 25
AREB6 MZF1 5502 4366 23% 21% 29% 27% 23% 22% 29% 27% <1E-16 4.30E-12       **      25 50 200 25
AREB6 IK1 4028 4204 21% 22% 28% 29% 22% 22% 28% 28% <1E-16 9.80E-14 ****            25 50 200 25
AREB6 PAX4 5413 6145 20% 22% 34% 24% 19% 21% 36% 25% <1E-16 <1E-16              25 50 200 25
AREB6 GKLF 5518 6123 21% 21% 29% 28% 21% 21% 30% 29% <1E-16 <1E-16              25 50 200 25
AREB6 AREB6 3746 2189 30% 28% 21% 21% 29% 29% 22% 20% <1E-16 1.70E-11 ****            25 50 200 25
AREB6 SP1 3561 3042 19% 21% 31% 29% 20% 21% 30% 29% <1E-16 <1E-16 ****            25 50 200 25
AREB6 P300 3232 3500 21% 20% 29% 29% 21% 23% 28% 28% <1E-16 4.00E-10 ****            25 50 200 25
AREB6 GATA1 4001 4518 22% 21% 29% 29% 22% 22% 28% 28% <1E-16 7.10E-15 ****            25 50 200  25 50
AREB6 LYF1 6383 3772 22% 22% 28% 28% 21% 21% 30% 28% <1E-16 <1E-16              25 50 200 25
HNF4 GATA3 8198 10481 27% 28% 22% 22% 27% 28% 22% 23% <1E-16 <1E-16              25 50 25
HNF4 SP1 7474 6933 28% 29% 19% 24% 28% 28% 21% 23% <1E-16 <1E-16     **** ****      25 50 200  25 50
HNF4 SRY 6586 8127 29% 29% 20% 22% 28% 29% 20% 23% <1E-16 <1E-16     **** ****      25 50 200 25
HNF4 ELK1 10747 12259 27% 27% 22% 23% 27% 27% 23% 23% <1E-16 <1E-16     **** ****      25 50 200  25 50
HNF4 MZF1 11085 11253 28% 30% 20% 22% 28% 30% 20% 22% <1E-16 <1E-16              25 50 200 25
HNF4 IK1 9450 10405 27% 28% 22% 23% 27% 28% 22% 23% <1E-16 <1E-16              25 50 25
HNF4 HOXA3 8165 9677 22% 23% 31% 25% 23% 23% 30% 24% <1E-16 <1E-16              25 50 25
HNF4 GKLF 7011 7710 31% 31% 18% 20% 30% 32% 18% 20% <1E-16 <1E-16              25 50 200 25
FOXD3 SRY 5999 8490 18% 18% 32% 31% 13% 15% 37% 35% <1E-16 <1E-16     *        25 50 200 25
FOXD3 PAX4 4666 5132 17% 19% 40% 23% 16% 17% 45% 23% <1E-16 <1E-16 ****            25 50 200 25
FOXD3 GKLF 2945 3244 21% 20% 29% 31% 18% 18% 37% 28% <1E-16 <1E-16 ****            25 50 200 25
GATA3 SP1 4697 4930 30% 30% 20% 20% 32% 28% 19% 21% <1E-16 <1E-16 ****   **** ****      25 50 200 25
GATA3 RREB1 1290 1348 17% 17% 36% 31% 17% 20% 33% 29% <1E-16 <1E-16 ****            25 50 200 25
GATA3 ELK1 8159 9991 27% 28% 24% 22% 27% 27% 23% 22% <1E-16 7.00E-15     **** ****      25 50 200  25 50
GATA3 P300 5735 6765 30% 29% 20% 21% 29% 28% 21% 22% <1E-16 <1E-16              25 50 200 25
GATA3 MZF1 8561 9357 32% 29% 19% 20% 30% 31% 20% 20% <1E-16 <1E-16       *      25 50 200 25
GATA3 GATA1 6972 8917 29% 29% 21% 21% 28% 28% 22% 21% <1E-16 <1E-16       **      25 50 200 25
GATA3 IK1 7572 8727 29% 28% 21% 22% 28% 28% 22% 22% <1E-16 <1E-16              25 50 200  25 50
GATA3 LYF1 6750 7838 29% 30% 21% 21% 27% 29% 22% 22% <1E-16 <1E-16              25 50 200 25
GATA3 PAX4 5510 6143 26% 23% 21% 30% 26% 23% 21% 31% <1E-16 <1E-16              25 50 200 25
GATA3 GKLF 5930 6708 32% 32% 18% 18% 31% 33% 19% 17% <1E-16 <1E-16 ****            25 50 200 25
TCF11 AML1 5633 7762 22% 38% 20% 21% 22% 37% 20% 22% <1E-16 <1E-16              25 50 200 25
TCF11 ARP1 3177 4194 21% 21% 37% 21% 23% 21% 34% 23% <1E-16 <1E-16 ****            25 50 200  25 50
TCF11 CREBP1CJUN 1109 1174 9% 7% 77% 6% 9% 7% 76% 8% <1E-16 <1E-16 ****   **** ****      25 50 200 25
GR SRY 6598 8889 20% 23% 28% 29% 20% 23% 28% 29% <1E-16 <1E-16              25 50 200 25
GR MZF1 8770 10037 22% 23% 27% 28% 22% 24% 27% 28% <1E-16 <1E-16     **** ****      25 50 25
GR GKLF 6039 7318 20% 22% 29% 29% 19% 22% 30% 30% <1E-16 <1E-16              25 50 200 25
AML1 MZF1 6384 6802 30% 28% 21% 22% 29% 27% 22% 23% <1E-16 <1E-16     *** ***      25 50 200  25 50
AML1 LYF1 4440 5281 32% 28% 19% 21% 30% 28% 21% 21% <1E-16 <1E-16 ****     **      25 50 200 25
AML1 PAX4 3131 3610 20% 22% 25% 33% 19% 23% 26% 32% <1E-16 <1E-16 ****            25 50 200 25
NF1 SRY 5599 6746 22% 20% 33% 25% 21% 21% 32% 26% <1E-16 <1E-16     **** ****      25 50 200 25
NF1 GKLF 5746 6007 23% 21% 30% 26% 22% 21% 31% 26% <1E-16 <1E-16              25 50 200 25
ARP1 MZF1 3940 3634 20% 23% 27% 30% 23% 22% 26% 29% <1E-16 2.20E-10 ****     *      25 50 25
ARP1 GKLF 3779 2266 22% 21% 28% 29% 21% 20% 27% 32% <1E-16 <1E-16 ****            25 50 200 25
NKX61 SRY 1857 1898 20% 19% 37% 24% 16% 18% 39% 27% <1E-16 <1E-16 ****            25 50 200 25
NKX61 PAX4 1600 1451 19% 17% 42% 22% 18% 17% 43% 23% <1E-16 <1E-16 ****            25 50 200 25
SRY ELK1 5569 6980 29% 28% 21% 23% 30% 26% 20% 23% <1E-16 <1E-16     **** ****      25 50 200 25
SRY LYF1 6055 6962 21% 23% 34% 23% 22% 20% 35% 23% <1E-16 <1E-16     **** ****      25 50 25
SRY PAX4 6205 7417 38% 26% 16% 20% 42% 25% 15% 19% <1E-16 <1E-16 ****   * **      25 50 200 25
SRY GKLF 4622 5483 32% 30% 18% 20% 37% 27% 16% 20% <1E-16 <1E-16 ****   **** ****      25 50 200 25
RREB1 P300 1662 1312 16% 17% 36% 31% 16% 18% 37% 30% <1E-16 <1E-16 ****            25 50 200 25
RREB1 MZF1 3022 2326 15% 17% 38% 30% 13% 13% 44% 30% <1E-16 <1E-16 ****            25 50 200 25
RREB1 GATA1 2126 1784 17% 17% 38% 27% 18% 16% 38% 28% <1E-16 <1E-16 ****            25 50 200 25
RREB1 IK1 1737 1583 18% 20% 31% 31% 20% 20% 32% 29% <1E-16 1.10E-16 ****            25 50 200 25
RREB1 LYF1 1550 1306 18% 17% 29% 36% 17% 15% 33% 35% <1E-16 <1E-16 ****   **** *      25 50 200 25
RREB1 PAX4 740 792 21% 46% 15% 18% 24% 44% 12% 20% <1E-16 <1E-16              25 50 200 25
RREB1 GKLF 1362 1171 17% 15% 34% 34% 18% 16% 32% 33% <1E-16 <1E-16 ****            25 50 200 25
ELK1 ELK1 12232 13354 29% 28% 21% 22% 28% 28% 21% 22% <1E-16 <1E-16     **** ****      25 50 200 25
ELK1 P300 8344 8773 28% 28% 21% 22% 28% 27% 22% 23% <1E-16 <1E-16              25 50 200  25 50
ELK1 MZF1 13045 12134 28% 28% 22% 22% 28% 28% 22% 22% <1E-16 <1E-16     **** *      25 50 200 25
ELK1 GATA1 10218 11440 28% 28% 23% 22% 27% 27% 22% 24% <1E-16 1.10E-16     *        25 50 200  25 50
ELK1 IK1 10178 10570 27% 28% 22% 22% 28% 28% 22% 23% <1E-16 <1E-16     **        25 50 200  25 50
ELK1 LYF1 8994 9522 27% 28% 23% 22% 27% 28% 23% 22% <1E-16 <1E-16     **** ****      25 50 25
ELK1 PAX4 12013 11447 23% 23% 26% 28% 23% 23% 26% 28% <1E-16 <1E-16     ***        25 50 200  25 50
ELK1 GKLF 7481 7731 30% 30% 20% 20% 30% 31% 20% 19% <1E-16 <1E-16     **** ****      25 50 200 25
P300 MZF1 9553 8740 30% 31% 19% 21% 31% 30% 19% 21% <1E-16 <1E-16              25 50 200 25
P300 CMYB 6111 6853 27% 29% 22% 22% 26% 27% 24% 23% <1E-16 1.10E-06              25 50 200 25
P300 GATA1 7376 7763 28% 28% 21% 22% 29% 28% 21% 22% <1E-16 <1E-16              25 50 200  25 50
P300 IK1 7216 7172 29% 29% 21% 21% 29% 29% 20% 22% <1E-16 <1E-16              25 50 200 25
P300 LYF1 6589 6508 29% 31% 20% 20% 28% 31% 21% 21% <1E-16 <1E-16     **** *      25 50 200 25
P300 PAX4 8846 8294 20% 19% 31% 31% 21% 19% 31% 29% <1E-16 <1E-16              25 50 200 25
P300 GKLF 5393 5558 31% 33% 17% 19% 29% 33% 18% 20% <1E-16 <1E-16 ****            25 50 200 25
MZF1 MZF1 14460 12208 33% 33% 17% 18% 34% 33% 16% 16% <1E-16 <1E-16              25 50 200 25
MZF1 CMYB 9357 9556 26% 28% 23% 22% 26% 27% 24% 23% <1E-16 1.00E-08              25 50 25
MZF1 GATA1 11295 10907 29% 29% 21% 21% 29% 29% 21% 21% <1E-16 <1E-16              25 50 200 25
MZF1 IK1 11360 10302 30% 29% 20% 21% 30% 29% 20% 20% <1E-16 <1E-16              25 50 200 25
MZF1 LYF1 10160 9177 29% 31% 20% 20% 29% 32% 20% 20% <1E-16 <1E-16     **** **      25 50 200 25
MZF1 HOXA3 7279 7870 21% 25% 28% 26% 22% 25% 27% 25% <1E-16 5.20E-10              25 50 25
MZF1 NKX25 4959 5448 27% 29% 22% 22% 26% 28% 23% 23% <1E-16 5.10E-10     *** ****      25 50 200  25 50
MZF1 PAX4 5304 5615 30% 21% 21% 28% 30% 22% 21% 27% <1E-16 <1E-16              25 50 200 25
MZF1 GKLF 8798 8611 35% 36% 15% 15% 33% 37% 14% 15% <1E-16 <1E-16              25 50 200 25
MZF1 COMP1 7273 7899 26% 29% 23% 22% 26% 27% 23% 24% <1E-16 3.90E-06     *        25 50 25
CMYB PAX4 8530 9033 21% 22% 27% 29% 22% 23% 26% 29% <1E-16 <1E-16              25 50 200 25
CP2 PAX4 3602 4357 24% 31% 18% 27% 24% 32% 17% 26% <1E-16 <1E-16 ****            25 50 200 25
GATA1 IK1 8862 9297 27% 27% 22% 23% 28% 27% 22% 23% <1E-16 <1E-16              25 50 25
GATA1 LYF1 7566 7974 29% 29% 21% 22% 27% 29% 21% 22% <1E-16 <1E-16     **** *      25 50 200 25
GATA1 PAX4 4292 4876 23% 25% 21% 31% 22% 26% 20% 32% <1E-16 <1E-16 ****            25 50 200 25
GATA1 GKLF 6447 6834 29% 33% 19% 20% 28% 34% 19% 19% <1E-16 <1E-16              25 50 200 25
SOX5 PAX4 6078 6188 27% 29% 21% 23% 27% 29% 21% 23% <1E-16 <1E-16              25 50 25
IK1 LYF1 8112 7902 28% 30% 21% 21% 28% 29% 21% 21% <1E-16 <1E-16              25 50 200 25
IK1 PAX4 10020 9424 22% 20% 29% 28% 22% 21% 30% 28% <1E-16 <1E-16              25 50 200 25
IK1 GKLF 6987 6833 31% 32% 18% 20% 30% 33% 19% 19% <1E-16 <1E-16              25 50 200 25
LYF1 PAX4 5420 5654 27% 19% 27% 27% 25% 19% 28% 27% <1E-16 <1E-16 ****            25 50 200 25
LYF1 GKLF 6422 6322 32% 28% 23% 18% 30% 29% 24% 18% <1E-16 <1E-16              25 50 200 25
HOXA3 GKLF 5118 5564 24% 20% 29% 27% 23% 22% 28% 27% <1E-16 2.20E-14 ****            25 50 25
EN1 PAX4 5996 7109 23% 21% 27% 29% 24% 21% 28% 28% <1E-16 <1E-16     **** ****      25 50 25
PAX4 PAX4 3953 4317 33% 22% 22% 23% 35% 23% 20% 22% <1E-16 <1E-16 ****            25 50 200 25
PAX4 GKLF 3972 4180 22% 26% 19% 33% 24% 26% 18% 32% <1E-16 <1E-16 ****            25 50 200 25
CEBP MZF1 5921 6014 27% 29% 22% 23% 26% 29% 22% 22% 1.10E-16 2.20E-15     **** ***      25 50 200  25 50
RORA1 ER 9337 2939 22% 23% 27% 28% 21% 21% 27% 32% 1.10E-16 <1E-16              25 50 200 25
HNF1 MEIS1A/HOXA9 8746 9327 23% 24% 29% 24% 24% 24% 30% 23% 1.10E-16 <1E-16              25 50 25
NFAT HFH3 5625 5713 22% 22% 28% 28% 21% 22% 28% 29% 1.10E-16 <1E-16              25 50 200 25
MEIS1A/HOXA9 HNF1 8305 8774 24% 24% 29% 23% 24% 23% 30% 23% 1.10E-16 <1E-16              25 50 25
GATA2 GATA1 11382 8616 27% 27% 23% 23% 26% 27% 24% 22% 1.10E-16 9.60E-12              25 50 200  25 50
HNF4 RREB1 1762 1679 20% 20% 33% 26% 21% 21% 31% 27% 1.10E-16 7.40E-11 ****            25 50 25
HNF4 PAX4 9859 10478 23% 22% 28% 27% 24% 22% 27% 27% 1.10E-16 5.40E-15              25 50 25
AML1 GATA1 5027 6288 28% 28% 21% 23% 26% 26% 23% 24% 1.10E-16 0.00046 ****   ** ****      25 50  
GATA2 LYF1 6385 7566 28% 28% 23% 22% 26% 28% 23% 23% 2.20E-16 2.00E-11              25 50 25
1-Oct AML1 3926 4780 24% 22% 31% 23% 25% 22% 31% 22% 2.20E-16 <1E-16 ****            25 50 25
AML1 NF1 4494 5667 30% 26% 22% 22% 28% 27% 21% 25% 2.20E-16 7.10E-11 ****     *      25 50 25
PAX5 GKLF 2927 1564 29% 29% 20% 23% 29% 29% 19% 24% 3.30E-16 1.40E-09 ****            25 50 200 25
SP1 EN1 3285 3813 28% 29% 21% 21% 28% 28% 21% 24% 3.30E-16 3.10E-10 ****   **** ****      25 50 25
YY1 IK1 5618 6394 23% 22% 28% 27% 22% 22% 28% 28% 5.60E-16 1.10E-16              25 50 200 25
CEBP SP1 4365 4333 28% 29% 22% 22% 27% 28% 22% 23% 5.60E-16 2.50E-09 ****   **** ****      25 50 200 25
P53 SP1 8022 6752 22% 24% 26% 28% 21% 25% 25% 29% 5.60E-16 3.40E-15     *** **      25 50 25
HFH3 AREB6 4281 5187 28% 29% 22% 21% 29% 30% 21% 21% 5.60E-16 <1E-16 ****   ***        25 50 200 25
SOX9 SRY 7028 8266 28% 28% 23% 22% 28% 29% 21% 22% 7.80E-16 <1E-16              25 50 200 25
LMO2COM GATA1 5891 7641 28% 27% 22% 22% 26% 28% 23% 23% 8.90E-16 2.90E-14       ***      25 50 200  25 50
HNF4 P300 7281 8354 27% 27% 22% 23% 27% 27% 23% 23% 1.10E-15 1.20E-10              25 50 25
CEBPB LYF1 6797 6472 27% 28% 23% 22% 27% 27% 23% 23% 1.20E-15 1.20E-07     *** *      25 50 200  25 50
NFAT 1-Oct 13710 7689 27% 27% 23% 23% 26% 28% 23% 23% 1.20E-15 2.70E-11              25 50 200  25 50
1-Oct FOXD3 6033 5712 23% 22% 27% 28% 23% 22% 28% 27% 1.20E-15 1.60E-12              25 50 25
P53 GKLF 4677 5067 21% 24% 26% 29% 20% 26% 24% 30% 1.30E-15 <1E-16 ****            25 50 25
NFY LYF1 5067 5128 22% 22% 28% 28% 23% 22% 28% 27% 1.80E-15 5.20E-11       *      25 50 200  25 50
PBX1 HNF4 5737 5867 28% 27% 21% 24% 29% 27% 22% 22% 1.90E-15 <1E-16              25 50 25
AREB6 HNF4 7683 9682 22% 23% 28% 26% 23% 23% 27% 27% 2.00E-15 7.30E-11              25 50 25
AP4 ARP1 3568 3907 23% 23% 31% 23% 24% 23% 30% 23% 2.10E-15 2.10E-12 ****            25 50 25
FOXJ2 AREB6 4902 5812 22% 22% 28% 28% 21% 21% 28% 29% 3.60E-15 <1E-16 ****   *** *      25 50 200 25
NKX25 PAX4 4131 4478 23% 24% 23% 31% 21% 25% 22% 32% 3.70E-15 <1E-16 ****            25 50 200  25 50
RREB1 CMYB 1459 1418 21% 18% 30% 30% 22% 18% 32% 28% 3.90E-15 2.30E-14 ****            25 50 200 25
LMO2COM HNF4 6996 9067 28% 27% 23% 22% 27% 26% 23% 24% 4.60E-15 1.00E-11              25 50 25
NKX25 GKLF 5275 4987 25% 21% 28% 27% 24% 21% 29% 26% 5.30E-15 3.30E-16              25 50 200  25 50
LMO2COM ELK1 11197 8320 27% 27% 23% 23% 27% 27% 22% 24% 5.90E-15 1.30E-13     ** ****      25 50 25
HSF1 MZF1 8117 8296 25% 28% 22% 25% 25% 28% 22% 25% 6.40E-15 3.80E-13     **** ****      25 50 25
SP1 NKX25 3781 4026 26% 30% 22% 22% 25% 29% 22% 23% 6.70E-15 3.50E-10 ****   **** ****      25 50 25
HFH3 1-Oct 6060 6017 22% 22% 28% 27% 22% 22% 28% 27% 7.70E-15 1.10E-16              25 50 200 25
AML1 RREB1 892 986 18% 19% 28% 35% 18% 20% 27% 35% 8.00E-15 2.60E-14     *        25 50 200 25
NFAT GATA1 7140 7912 27% 28% 22% 23% 27% 27% 23% 24% 8.30E-15 2.00E-07     *        25 50 25
GR ELK1 8329 11030 22% 23% 27% 27% 23% 23% 26% 27% 8.80E-15 2.70E-10     *** ***      25 50 25
MEIS1A/HOXA9 AP1 8364 9952 23% 23% 29% 24% 24% 23% 29% 25% 1.00E-14 <1E-16             25 25
CREL MZF1 9624 8184 23% 25% 24% 28% 22% 26% 24% 28% 1.20E-14 4.30E-13     ***        25 50 25
P53 PAX4 8095 7847 28% 26% 24% 22% 28% 25% 25% 22% 1.50E-14 2.90E-10              25 50 25
FOXJ2 NFAT 6317 6391 27% 28% 23% 22% 28% 28% 22% 22% 1.70E-14 <1E-16              25 50 200 25
YY1 GATA3 5914 7416 22% 22% 28% 28% 22% 22% 28% 27% 1.70E-14 <1E-16              25 50 200 25
YY1 GATA1 9187 6743 22% 23% 28% 27% 23% 23% 28% 26% 2.20E-14 1.20E-13              25 50 200  25 50
FOXJ2 1-Oct 6565 6443 28% 27% 23% 23% 28% 27% 23% 23% 2.30E-14 3.30E-11              25 50 25
COUP AP4 3134 3891 22% 23% 31% 23% 23% 23% 32% 22% 2.60E-14 <1E-16 ****            25 50 25
NFAT GR 8177 9928 22% 24% 27% 27% 23% 23% 27% 27% 3.00E-14 1.90E-14              25 50 25
NFY P300 7464 4518 23% 22% 28% 26% 23% 23% 28% 25% 3.70E-14 1.60E-07     **        25 50 200  25 50
GATA3 HOXA3 7494 8937 23% 24% 29% 24% 23% 24% 29% 25% 4.30E-14 4.20E-15              25 50 25
SRY MZF1 5883 6825 25% 29% 23% 23% 28% 28% 22% 23% 4.70E-14 <1E-16     **** ****      25 50 25
HNF1 PAX4 6016 5567 29% 24% 23% 24% 29% 24% 23% 24% 7.20E-14 4.90E-09              25 50 25
HNF4 GR 8118 11155 23% 22% 27% 27% 23% 22% 27% 27% 8.70E-14 <1E-16              25 50 25
GATA2 P300 5519 6587 28% 28% 23% 22% 27% 27% 22% 23% 9.00E-14 3.30E-11              25 50 200  25 50
CEBPB SRY 7108 7701 25% 23% 29% 24% 24% 23% 28% 25% 9.80E-14 1.40E-09     ** ****      25 50 25
NFY GKLF 4170 4339 23% 21% 29% 27% 25% 22% 27% 27% 1.00E-13 4.50E-06 ****     **      25 50 25
AP2 IK1 12092 9013 23% 23% 28% 26% 23% 23% 28% 26% 1.50E-13 7.50E-15     **** ****      25 50 25
ZID SP1 3602 2878 22% 22% 28% 29% 22% 23% 27% 28% 1.60E-13 1.70E-06 ****   **** ****      25 50 200 25
ZID MZF1 6107 3000 23% 22% 28% 27% 22% 23% 28% 28% 1.70E-13 4.30E-08              25 50 25
NFY GATA1 5699 6419 23% 22% 28% 27% 23% 24% 28% 25% 1.80E-13 4.10E-07     **        25 50 200  25 50
HFH3 HNF4 7568 5161 23% 23% 28% 26% 21% 22% 30% 27% 2.00E-13 <1E-16              25 50 25
MYCMAX PAX4 3749 4627 24% 29% 20% 26% 24% 30% 20% 26% 2.30E-13 <1E-16 ****            25 50 25
YY1 NFAT 10870 11369 24% 23% 27% 27% 24% 24% 26% 26% 2.40E-13 2.90E-05              25 50 200  
YY1 ELK1 9848 7065 23% 23% 27% 26% 23% 24% 27% 26% 2.40E-13 1.20E-07              25 50 25
SP1 MEIS1A/HOXA9 5432 6046 28% 28% 22% 23% 27% 26% 23% 24% 2.90E-13 2.20E-06     **** ****      25 50 25
E2F SRY 82 110 15% 9% 62% 15% 13% 9% 57% 21% 3.10E-13 7.00E-14     **** ****      25 50 25
CMYB GATA1 7631 9104 28% 27% 23% 23% 26% 26% 24% 24% 3.40E-13 0.032              25 50  
PAX5 MZF1 4164 3045 29% 27% 22% 22% 29% 27% 22% 22% 5.40E-13 4.00E-12 ****            25 50 25
NFY EN1 6563 6888 23% 23% 29% 26% 24% 23% 29% 25% 5.90E-13 5.90E-12     **** ****      25 50 25
GATA2 ELK1 7705 9483 27% 27% 23% 23% 27% 27% 23% 24% 6.30E-13 2.60E-09       *      25 50 25
HNF1 EN1 9644 9559 26% 27% 22% 25% 26% 27% 22% 25% 7.50E-13 2.10E-14             25 25
YY1 LYF1 9133 5947 23% 23% 28% 26% 23% 22% 28% 27% 7.90E-13 9.70E-14     ** **      25 50 25
AML1 P300 7292 5192 27% 27% 22% 23% 28% 27% 22% 23% 8.00E-13 3.00E-13     **** **      25 50 200  25 50
AP1 SRY 6936 7807 24% 23% 29% 24% 24% 24% 29% 23% 8.50E-13 6.60E-12             25 25
ELK1 NKX25 5343 6738 27% 28% 22% 23% 26% 27% 24% 23% 8.80E-13 3.90E-05     **** ****      25 50  
PBX1 NKX61 1912 1706 21% 21% 31% 28% 20% 20% 32% 27% 1.00E-12 3.90E-15 ****            25 50 25
AREB6 FOXD3 4111 4937 28% 28% 22% 22% 30% 30% 21% 20% 1.00E-12 <1E-16 ****   ****        25 50 200 25
TST1 SP1 2835 3077 26% 30% 21% 23% 27% 28% 22% 23% 1.10E-12 1.80E-07 ****   **** ****      25 50 25
GATA3 AML1 7803 10545 27% 27% 23% 23% 26% 26% 24% 24% 1.20E-12 0.00016              25 50 200  
MYOGNF1 HOXA3 5656 6837 29% 24% 23% 24% 28% 24% 23% 24% 1.40E-12 4.20E-10              25 50 25
CEBPB GATA3 8107 8302 27% 27% 23% 23% 27% 26% 23% 24% 1.70E-12 2.70E-06              25 50 25
1-Oct LYF1 5630 6050 23% 22% 29% 26% 25% 23% 28% 24% 2.00E-12 8.80E-09     **** ****      25 50 25
SRY NKX25 8812 9074 23% 24% 28% 25% 23% 23% 28% 26% 2.50E-12 8.90E-16     *        25 50 25
CMYB LYF1 11310 7658 27% 26% 24% 23% 27% 27% 24% 22% 2.90E-12 3.40E-11     **        25 50 25
LMO2COM NFAT 7383 7939 27% 27% 22% 24% 26% 26% 24% 23% 3.30E-12 3.40E-05              25 50  
AREB6 GR 7047 9858 26% 28% 23% 23% 27% 28% 23% 23% 3.80E-12 1.80E-15     *        25 50 25
NFY GATA3 5764 6498 22% 23% 28% 27% 24% 23% 28% 25% 3.90E-12 9.80E-08     **** ****      25 50 25
PBX1 1-Oct 7630 6828 27% 28% 23% 23% 28% 27% 22% 23% 3.90E-12 4.30E-13              25 50 25
AML1 SRY 3378 4741 21% 23% 27% 29% 19% 22% 30% 30% 3.90E-12 <1E-16 ****   **** ****      25 50 25
AP2 CMYB 10189 8403 24% 22% 27% 26% 25% 22% 27% 26% 4.00E-12 5.20E-10     * ****     25 25
SRY SOX5 7159 8333 27% 27% 23% 23% 29% 27% 21% 22% 4.10E-12 <1E-16              25 50 25
MEIS1A/HOXA9 PAX4 6895 8296 23% 23% 28% 27% 24% 23% 27% 26% 4.50E-12 2.00E-05              25 50 25
SRY CP2 4104 5487 28% 27% 20% 25% 29% 27% 19% 25% 6.80E-12 <1E-16 ****   **** ****      25 50 25
SOX9 PAX4 5899 6123 28% 26% 21% 24% 28% 27% 21% 24% 7.00E-12 <1E-16              25 50 25
SOX9 GKLF 7736 5057 28% 26% 24% 22% 29% 26% 23% 23% 7.10E-12 9.30E-11              25 50 200 25
HNF1 MYCMAX 4734 5731 23% 24% 30% 24% 23% 24% 28% 25% 1.00E-11 2.30E-09              25 50 25
LMO2COM LYF1 5724 6583 27% 27% 23% 22% 25% 28% 23% 24% 1.00E-11 7.60E-07              25 50 25
CREL SRY 4758 5634 22% 23% 27% 28% 22% 23% 26% 29% 1.10E-11 8.90E-16 ****   **** ****      25 50 25
GATA2 SP1 4418 4642 28% 28% 23% 22% 29% 28% 21% 22% 1.10E-11 3.30E-16 ****   **** ****      25 50 25
AREB6 RREB1 774 714 33% 30% 17% 20% 33% 31% 19% 17% 1.10E-11 1.30E-13              25 50 200 25
AP2 ELK1 14818 11915 24% 23% 27% 26% 23% 24% 26% 26% 1.20E-11 2.20E-08     * ****      25 50 25
NFAT LYF1 7534 7645 26% 28% 24% 22% 26% 27% 24% 23% 1.30E-11 5.10E-06     * *      25 50 25
SRY CMYB 5333 6827 23% 22% 27% 28% 23% 21% 26% 30% 1.30E-11 <1E-16     **** ****      25 50 25
SP1 CP2 10220 8267 22% 24% 27% 26% 24% 24% 26% 25% 1.40E-11 0.017     **** ****      25 50  
AP1FJ PAX4 4800 5818 27% 25% 21% 27% 27% 26% 20% 27% 1.40E-11 5.20E-14 ****           25 25
ER MZF1 9986 10033 23% 24% 26% 28% 22% 24% 25% 28% 1.50E-11 3.70E-14              25 50 25
ZID LYF1 2178 2211 23% 20% 27% 30% 22% 23% 27% 28% 1.70E-11 1.30E-05 ****   ****        25 50  
HOXA3 PAX4 6108 6192 22% 28% 23% 27% 21% 28% 23% 27% 1.70E-11 <1E-16              25 50 25
NF1 PAX4 4520 4804 23% 23% 29% 25% 22% 23% 28% 27% 1.80E-11 4.90E-10 ****            25 50 25
AP2 NFY 6343 5441 27% 26% 21% 25% 27% 26% 22% 25% 2.20E-11 0.00015              25 50  
GATA3 CMYB 6620 8576 25% 29% 24% 22% 25% 27% 24% 24% 2.20E-11 9.20E-05       *      25 50  
LMO2COM P300 8258 5702 27% 27% 24% 22% 27% 27% 22% 23% 2.80E-11 1.70E-09              25 50 25
CEBPB ELK1 11949 7434 27% 27% 23% 24% 27% 26% 23% 23% 3.30E-11 7.00E-09     **** ****      25 50 25
LMO2COM IK1 6365 7379 27% 27% 23% 23% 27% 27% 23% 24% 3.50E-11 7.70E-08              25 50 200  25 50
HSF1 SRY 6156 7175 26% 28% 22% 24% 27% 28% 21% 24% 4.80E-11 2.20E-16     **** ****     25 25
CREL HOXA3 6532 7028 27% 23% 28% 22% 27% 23% 28% 23% 6.30E-11 7.30E-14     * **     25 25
GR IK1 7874 9739 23% 23% 27% 27% 24% 23% 27% 26% 6.50E-11 7.50E-07              25 50 25
1-Oct MZF1 9970 5728 27% 27% 23% 23% 26% 27% 23% 23% 6.80E-11 6.20E-08     **** ****      25 50 200  25 50
SP1 ER 8637 8034 24% 22% 26% 27% 24% 22% 25% 28% 8.00E-11 1.90E-15     **** ****      25 50 25
TCF11 EN1 8095 9804 26% 27% 22% 25% 26% 27% 22% 25% 1.00E-10 1.60E-11             25 25
LYF1 EN1 6744 7363 28% 26% 23% 23% 28% 27% 22% 24% 1.20E-10 2.80E-14     *        25 50 25
MEIS1A/HOXA9 MZF1 7976 9011 27% 27% 24% 23% 27% 25% 24% 24% 1.70E-10 0.00098              25 50 25
MSX1 EN1 8549 9418 28% 24% 25% 23% 28% 23% 26% 23% 1.80E-10 1.90E-13             25 25
AML1 CMYB 7910 6221 26% 27% 24% 22% 27% 27% 24% 22% 2.00E-10 4.80E-10     ** ***      25 50 25
LYF1 NKX25 7973 9239 26% 28% 23% 23% 26% 26% 25% 23% 2.00E-10 0.00069              25 50  
FOXJ2 HNF4 8330 5744 27% 27% 23% 23% 29% 27% 22% 22% 2.30E-10 1.90E-15              25 50 25
PAX6 PBX1 7419 6924 23% 24% 28% 26% 23% 23% 29% 26% 2.70E-10 8.70E-14              25 50 25
CEBP AML1 4199 5180 27% 28% 22% 23% 28% 28% 21% 23% 3.00E-10 6.70E-15 ****            25 50 200  25 50
TATA NKX25 7839 7200 24% 24% 28% 24% 23% 24% 29% 23% 3.10E-10 2.70E-13             25 25
CEBPB PBX1 6947 5997 24% 24% 29% 24% 24% 23% 27% 25% 3.60E-10 0.0004              25 50  
CDPCR1 MZF1 5240 5572 27% 28% 22% 23% 27% 26% 23% 24% 3.60E-10 8.60E-06     * **     25  
P53 LYF1 5874 6357 22% 24% 27% 27% 23% 24% 25% 27% 3.90E-10 3.00E-05              25 50  
HNF1 NFY 6023 5901 23% 24% 29% 25% 22% 22% 31% 25% 4.00E-10 <1E-16              25 50 25
CEBPB P300 5013 5051 27% 27% 22% 23% 28% 25% 23% 24% 4.20E-10 4.90E-08     **        25 50 200  25 50
CEBPB RREB1 1747 1629 20% 22% 31% 27% 20% 23% 27% 30% 4.40E-10 9.70E-08 ****   *        25 50 200 50
NFY NFY 406 384 18% 15% 35% 31% 13% 16% 36% 35% 4.50E-10 3.20E-15 * **** *        50 200 50
CEBPB IK1 12009 7006 27% 26% 24% 23% 27% 27% 23% 23% 5.30E-10 4.60E-10              25 50 25
CEBP GATA3 6067 6910 27% 27% 22% 24% 26% 28% 22% 24% 5.30E-10 1.10E-10              25 50 25
NFAT CEBP 6906 6785 27% 27% 23% 23% 26% 26% 24% 24% 5.40E-10 0.0018              25 50  
HFH3 GR 7790 5739 27% 27% 23% 23% 26% 28% 23% 23% 5.50E-10 2.80E-10              25 50 25
YY1 AREB6 4520 3090 27% 28% 22% 23% 28% 27% 23% 22% 5.80E-10 1.90E-07 ****            25 50 25
HNF4 MSX1 7464 9188 23% 25% 28% 24% 24% 24% 27% 25% 6.50E-10 5.70E-05     *        25 50  
HNF1 PBX1 8166 7604 24% 23% 27% 26% 23% 22% 28% 27% 7.70E-10 <1E-16              25 50 25
COUP GKLF 3755 4427 22% 23% 28% 28% 22% 23% 27% 28% 7.80E-10 3.50E-10 ****           50 50
IK1 NKX25 5129 5871 27% 28% 23% 23% 26% 27% 22% 24% 1.10E-09 2.60E-07              25 50 25
TST1 GATA3 7156 7223 26% 28% 23% 24% 26% 27% 23% 24% 1.20E-09 6.60E-05              25 50  
LMO2COM SRY 5748 6986 27% 28% 22% 23% 25% 27% 24% 25% 1.20E-09 0.0047              25 50  
YY1 RREB1 1480 1524 28% 31% 20% 22% 26% 28% 21% 24% 1.20E-09 0.0019 ****            25 50 200  
GATA2 IK1 7224 8407 27% 27% 23% 23% 27% 26% 23% 24% 1.30E-09 6.90E-07              25 50 25
MYOGNF1 MZF1 10298 9060 24% 23% 27% 26% 24% 23% 27% 26% 1.40E-09 1.50E-10              25 50 25
SP1 ARP1 3146 2784 24% 21% 27% 29% 25% 21% 25% 30% 1.40E-09 6.10E-09 ****   **** ****      25 50 25
YY1 HNF4 10178 7727 24% 23% 28% 25% 23% 24% 28% 26% 1.50E-09 1.50E-08              25 50 25
MSX1 PAX4 5560 5795 22% 26% 25% 28% 20% 26% 25% 29% 1.50E-09 <1E-16             25 25
PBX1 MZF1 3729 3828 25% 29% 22% 23% 27% 27% 25% 22% 1.70E-09 7.00E-06 ****   **** ****      25 50 25
CEBP ELK1 10175 6735 26% 27% 23% 24% 26% 27% 23% 24% 1.70E-09 6.50E-07     *        25 50 25
SP1 COMP1 4814 5054 26% 29% 22% 23% 26% 27% 23% 24% 1.70E-09 0.00053     **** ****     25 25
TST1 IK1 5913 5566 26% 28% 23% 23% 26% 27% 23% 24% 1.80E-09 0.0019              25 50  
HNF1 GATA3 7091 7651 25% 28% 23% 24% 25% 27% 23% 24% 2.00E-09 2.30E-05             25  
LMO2COM RREB1 1706 1897 24% 20% 31% 26% 22% 25% 27% 27% 2.10E-09 0.0032 ****            25 50  
NFY RREB1 871 832 29% 31% 18% 21% 26% 33% 18% 23% 2.20E-09 1.50E-07     ***        25 50 200 25
USF MYCMAX 10557 12731 27% 27% 23% 24% 26% 26% 25% 23% 2.20E-09 3.10E-06     **        25 50 200 50
MEIS1A/HOXA9 SP1 4334 4907 28% 27% 22% 23% 27% 27% 22% 24% 2.20E-09 1.10E-08 ****   **** ****      25 50 25
CDPCR3HD MZF1 5649 6069 27% 28% 23% 23% 26% 26% 23% 24% 2.20E-09 0.001     **** ****      25 50  
PBX1 ELK1 4936 4782 27% 28% 22% 23% 27% 26% 23% 24% 2.30E-09 2.30E-05     *** **      25 50 25
EGR1 SP1 240 220 40% 30% 17% 13% 41% 35% 13% 10% 2.50E-09 4.40E-14     *** ***      25 50 25
CDPCR3HD GATA1 5332 6734 27% 27% 22% 23% 27% 27% 23% 24% 2.50E-09 4.80E-08              25 50 25
HAND1E47 PAX4 10722 11039 23% 24% 26% 27% 24% 24% 26% 26% 2.60E-09 1.10E-05              25 50 25
HNF4 LYF1 8322 9494 25% 28% 23% 24% 26% 27% 23% 23% 2.70E-09 2.70E-10              25 50 25
AP2 AREB6 5246 4183 28% 26% 23% 23% 27% 27% 24% 22% 3.10E-09 1.90E-06              25 50 25
MYOGNF1 GKLF 5734 5902 24% 22% 28% 26% 23% 23% 27% 27% 3.50E-09 4.50E-08              25 50 25
CEBP IK1 10002 10517 27% 27% 23% 24% 26% 26% 24% 24% 3.50E-09 0.0078              25 50  
CEBPB NFAT 9278 8384 27% 26% 23% 23% 27% 26% 24% 23% 3.70E-09 2.40E-07              25 50 25
NFAT CREL 12177 12236 23% 24% 26% 27% 23% 24% 26% 26% 3.80E-09 2.70E-07     **** **      25 50  50 200
RFX1 NFAT 5746 6538 27% 27% 23% 23% 27% 26% 23% 24% 4.00E-09 8.00E-06     **** ***      25 50 25
MEIS1A/HOXA9 GKLF 5634 6485 29% 24% 24% 23% 27% 25% 24% 24% 4.10E-09 0.00015              25 50  
P300 COMP1 5410 6225 27% 28% 22% 24% 26% 26% 24% 24% 4.10E-09 0.043              25 50  
AP2 HOXA3 5714 5488 28% 24% 22% 26% 28% 24% 22% 26% 4.50E-09 4.00E-09     **** ****     25 25
FOXD3 NKX61 1461 1378 31% 26% 22% 21% 33% 29% 19% 19% 4.50E-09 <1E-16 ****            25 50 25
SP1 HOXA3 5092 5511 23% 26% 28% 23% 23% 25% 28% 23% 6.00E-09 3.60E-09     **** ****     25 25
FOXD3 1-Oct 7209 6698 23% 23% 26% 27% 23% 23% 27% 27% 6.00E-09 3.00E-09             25 25
FOXD3 NF1 3417 3602 29% 24% 25% 22% 26% 28% 25% 21% 6.20E-09 9.60E-09 ****            25 50 25
ZID GKLF 3091 1752 22% 23% 26% 29% 19% 24% 26% 30% 6.60E-09 9.90E-09 ****            25 50 25
GATA3 GR 12512 16864 24% 24% 26% 27% 24% 24% 26% 26% 6.70E-09 0.00018              25 50  
SP1 XBP1 1101 827 30% 29% 19% 21% 30% 26% 20% 24% 8.20E-09 0.0002 **     **      25 50  
IRF1 MZF1 281 237 28% 39% 13% 20% 27% 31% 20% 22% 8.50E-09 0.067     **** ****     25  
GATA1 NKX25 4584 5949 26% 28% 22% 24% 25% 27% 24% 24% 8.90E-09 0.0041 ****   * ****      25 50  
ZID P300 3743 2177 22% 23% 28% 27% 22% 22% 29% 27% 9.40E-09 7.10E-07 ****            25 50 25
GKLF COMP1 5511 6150 26% 28% 24% 22% 25% 29% 24% 22% 1.00E-08 7.50E-11              25 50 25
AML1 CP2 5143 6346 23% 23% 26% 28% 24% 23% 27% 27% 1.10E-08 5.20E-07              25 50 25
CMYB EN1 11361 13788 27% 26% 23% 24% 26% 26% 24% 24% 1.20E-08 0.00017     **** ****     50  
MEIS1A/HOXA9 GATA1 6978 8957 26% 27% 23% 24% 26% 27% 24% 23% 1.30E-08 7.50E-07              25 50 25
PBX1 GR 5768 6278 24% 22% 27% 26% 24% 22% 26% 27% 1.40E-08 4.10E-07             25 25
SP1 HSF1 6415 6303 26% 27% 22% 25% 27% 25% 23% 25% 1.40E-08 5.90E-06     **** ****     25 25
PAX5 SP1 4910 3326 28% 26% 24% 22% 28% 27% 22% 22% 1.50E-08 3.00E-08     **** ****      25 50 25
AP2 AML1 11205 5815 24% 23% 27% 26% 23% 23% 27% 27% 1.50E-08 6.30E-07     **** ****      25 50 25
AP2 CEBP 8637 4665 24% 23% 27% 26% 24% 22% 28% 26% 1.60E-08 2.90E-08     **** ****      25 50 25
LMO2COM YY1 5199 6539 23% 23% 27% 27% 23% 23% 27% 27% 1.60E-08 7.50E-10              25 50 25
CREL PAX4 7026 4031 22% 26% 25% 27% 22% 26% 25% 28% 1.60E-08 2.00E-06              25 50 25
COUP HNF4 5562 4166 23% 23% 27% 27% 22% 22% 28% 28% 1.80E-08 6.60E-13              25 50 200 25
USF ARP1 3030 3445 24% 23% 30% 23% 21% 25% 31% 22% 2.00E-08 <1E-16 ****   **** ****     25 25
COUP SRY 3856 4917 23% 22% 27% 28% 23% 24% 25% 28% 2.00E-08 3.00E-06 ****   **** ****      25 50 200  50 200
PAX2 MZF1 8027 8920 27% 27% 23% 24% 26% 27% 24% 23% 2.10E-08 1.80E-08             25 25
RREB1 ELK1 2070 1783 20% 23% 27% 29% 22% 21% 29% 28% 2.10E-08 3.40E-09 ****            25 50 25
NFAT GATA2 7982 8567 26% 27% 24% 23% 26% 26% 24% 24% 2.20E-08 0.00044             25  
HNF4 1-Oct 6841 7840 23% 24% 28% 25% 24% 24% 27% 25% 2.20E-08 0.00014              25 50 25
CEBPB GATA1 6129 6656 27% 27% 23% 23% 27% 26% 23% 24% 2.30E-08 2.90E-06     * **      25 50 25
HAND1E47 CP2 15222 17256 24% 24% 26% 26% 24% 24% 25% 26% 2.30E-08 3.80E-05              25 50  
MSX1 GKLF 4717 5260 25% 22% 28% 25% 24% 23% 28% 25% 2.40E-08 1.20E-06 ****           25 25
OCT-1 AREB6 11117 7144 23% 24% 26% 27% 23% 24% 27% 26% 2.50E-08 9.20E-07     ***        25 50 25
ARP1 ELK1 5736 6454 23% 23% 27% 27% 23% 24% 27% 26% 2.60E-08 3.50E-06     ** ****      25 50 50
HFH3 CMYB 3503 4362 26% 29% 23% 23% 26% 29% 24% 21% 2.70E-08 1.20E-12 ****            25 50 200  25 50
COUP MSX1 2617 3412 23% 30% 23% 24% 24% 31% 23% 22% 3.00E-08 5.80E-15 ****           25 25
MZF1 EN1 6578 7149 26% 27% 23% 24% 27% 27% 23% 24% 3.00E-08 3.10E-07     **** ****     25 25
HFH3 IK1 6568 4011 23% 23% 27% 27% 23% 23% 26% 28% 3.10E-08 5.60E-06              25 50 25
FOXD3 MZF1 3015 5819 22% 25% 24% 30% 23% 24% 27% 26% 3.40E-08 1.70E-05 ****   **** ****     25  50 200
FOXJ2 GR 5167 6279 23% 23% 27% 28% 23% 23% 26% 28% 3.70E-08 6.80E-09              25 50 25
IRF1 SRY 381 423 33% 32% 17% 18% 33% 35% 14% 18% 3.80E-08 3.00E-12     *       25 25
GATA2 HNF4 7792 10212 27% 26% 24% 23% 27% 25% 24% 24% 4.30E-08 3.10E-05              25 50  
HNF4 FOXD3 7214 4748 24% 23% 27% 26% 23% 21% 30% 27% 5.00E-08 <1E-16              25 50 25
HNF1 MZF1 4839 5096 25% 28% 22% 25% 26% 28% 22% 24% 5.20E-08 1.10E-06 ****   **** ****     25 25
MYB PAX4 5709 6396 23% 27% 23% 27% 23% 28% 22% 27% 5.50E-08 6.60E-12             25 25
HSF1 PAX4 5021 5188 25% 27% 22% 27% 25% 27% 21% 27% 5.70E-08 1.00E-12             25 25
USF MZF1 10081 8967 24% 23% 27% 26% 25% 23% 26% 26% 5.90E-08 0.0012             25  
TCF11 PAX4 5230 6026 26% 24% 22% 27% 27% 24% 22% 27% 5.90E-08 1.20E-08             25 25
EGR1 MZF1 149 127 45% 24% 12% 19% 44% 30% 13% 13% 7.30E-08 1.60E-07     **** ****     25 25
GATA2 AREB6 3288 3984 22% 23% 28% 27% 24% 22% 28% 27% 7.30E-08 2.60E-08 ****            25 50 25
MEIS1A/HOXA9 LYF1 6623 8017 27% 26% 22% 24% 26% 27% 23% 25% 7.70E-08 1.60E-06     * *      25 50 25
FOXD3 AML1 2255 2697 27% 29% 22% 22% 29% 31% 22% 19% 7.70E-08 <1E-16 ****            25 50 25
GATA3 NKX25 5051 6411 26% 28% 24% 22% 26% 26% 24% 24% 8.10E-08 0.059             25  
MYB MEIS1A/HOXA9 8713 11177 23% 24% 28% 25% 24% 24% 27% 25% 8.30E-08 6.20E-06             25 25
CEBP P300 4270 4661 27% 28% 22% 24% 28% 26% 23% 23% 8.50E-08 5.40E-06 ****            25 50 25
MEIS1A/HOXA9 AML1 4779 6520 26% 28% 22% 24% 26% 28% 22% 24% 8.50E-08 1.10E-10             25 25
PBX1 NF1 4621 4544 23% 24% 29% 25% 22% 22% 29% 27% 8.80E-08 2.40E-15 ****            25 50 25
CDPCR3HD LYF1 5257 5924 27% 27% 23% 23% 26% 27% 23% 24% 9.80E-08 0.0019             25  
AP1 GKLF 8925 9895 25% 23% 27% 25% 25% 23% 27% 25% 9.90E-08 3.70E-05              25 50  
HNF1 HFH3 6283 6333 27% 27% 23% 23% 28% 27% 23% 23% 1.00E-07 1.40E-11              25 50 25
MEIS1A/HOXA9 SRY 7075 8798 28% 23% 25% 25% 26% 22% 25% 27% 1.00E-07 1.00E-07       *     25 25
HFH3 ELK1 6205 4110 23% 23% 27% 27% 21% 24% 28% 26% 1.00E-07 9.90E-10     * ***      25 50 25
GATA3 EN1 8143 9624 27% 26% 23% 25% 27% 27% 22% 25% 1.00E-07 1.10E-10              25 50 25
P53 HNF4 11287 13818 23% 25% 26% 27% 24% 25% 25% 26% 1.10E-07 0.00017              25 50  
FOXD3 GR 4389 5138 27% 27% 24% 22% 26% 28% 24% 22% 1.10E-07 9.30E-11 ****            25 50 25
HAND1E47 RREB1 1945 1740 20% 23% 28% 29% 23% 24% 25% 28% 1.10E-07 0.0051 ****            25 50  
CEBPB AREB6 5658 5575 23% 23% 27% 27% 22% 25% 27% 26% 1.20E-07 4.50E-07              25 50 50
HSF1 SP1 4699 4555 27% 26% 22% 25% 25% 26% 22% 26% 1.20E-07 1.40E-05 ****   **** ****     25  
1-Oct HNF4 11900 12503 27% 26% 24% 24% 27% 26% 24% 23% 1.20E-07 5.40E-08             50 50
FOXJ2 HNF1 10737 6804 24% 24% 27% 26% 23% 23% 27% 26% 1.50E-07 5.90E-08              25 50 25
AP2 GATA2 6795 6634 24% 23% 28% 25% 24% 23% 27% 26% 1.60E-07 2.10E-07     **** ****     25 25
ZID PAX4 3255 3031 28% 27% 23% 22% 28% 27% 23% 22% 1.60E-07 4.60E-07 ****            25 50 25
ARP1 MSX1 2427 2989 24% 30% 23% 23% 25% 30% 23% 23% 1.70E-07 1.70E-07 ****           25 25
PAX6 MZF1 6875 7284 23% 23% 27% 27% 24% 24% 26% 26% 1.80E-07 0.0053     *** ****     25  
NFAT HOXA3 13538 13670 24% 24% 27% 26% 25% 24% 26% 26% 1.80E-07 0.0047             50  
TST1 P300 4057 4135 27% 28% 23% 23% 26% 26% 24% 24% 2.00E-07 0.048 ****            25 50  
RFX1 MZF1 7757 7790 26% 27% 23% 25% 26% 27% 23% 23% 2.00E-07 9.50E-08             25 25
PBX1 HSF1 5587 5304 27% 26% 22% 25% 28% 25% 21% 26% 2.00E-07 5.70E-10             25 25
P53 P300 9290 10233 23% 24% 27% 26% 24% 24% 26% 26% 2.00E-07 2.20E-05              25 50  
NF1 HOXA3 5883 6880 26% 26% 22% 26% 26% 26% 22% 25% 2.10E-07 4.90E-08             25 25
HNF4 ARP1 5489 6404 23% 23% 27% 27% 24% 22% 26% 27% 2.10E-07 1.90E-07             50 50
SP1 GR 6657 7304 24% 23% 27% 26% 23% 22% 28% 27% 2.20E-07 4.80E-15     **** ****     25 25
SP1 1-Oct 2111 4531 24% 21% 29% 26% 25% 24% 27% 25% 2.40E-07 0.036 ****   **** ****     25 50
CEBPB HNF4 8145 8654 27% 26% 23% 24% 27% 27% 23% 23% 2.80E-07 4.30E-08     *       25 25
NFAT NKX25 5790 6256 28% 26% 24% 23% 27% 26% 23% 24% 2.80E-07 2.40E-05              25 50  
HSF1 HNF4 8429 10255 26% 27% 22% 25% 27% 27% 23% 24% 2.80E-07 7.90E-14              25 50 25
MZF1 MSX1 6869 7637 23% 27% 26% 24% 23% 27% 26% 24% 2.80E-07 3.50E-07     ** **     25 25
PBX1 NKX25 9553 8482 23% 24% 27% 26% 23% 23% 28% 26% 2.90E-07 1.70E-15             25 25
SOX9 HFH3 5420 5802 23% 23% 28% 26% 23% 22% 29% 26% 2.90E-07 6.60E-14              25 50 25
AML1 ELK1 5955 7543 28% 26% 24% 23% 26% 27% 24% 23% 2.90E-07 6.40E-07     **** ****      25 50 25
SP1 CDPCR3HD 4078 4350 27% 27% 21% 25% 26% 28% 23% 24% 3.00E-07 0.00012 ****            25 50  
TST1 PAX4 4152 4383 23% 22% 28% 26% 24% 23% 26% 27% 3.10E-07 0.00012 ****            25 50  
GATA3 MSX1 6981 8471 23% 24% 28% 25% 22% 26% 28% 24% 3.10E-07 3.00E-11             25 25
CHOP HOXA3 5568 5733 28% 24% 23% 25% 27% 24% 24% 25% 3.10E-07 0.028             25  
RFX1 ELK1 7633 8538 27% 26% 23% 23% 26% 26% 23% 24% 3.20E-07 0.00034     **** ****      25 50 25
TGIF GKLF 5032 5966 24% 23% 28% 26% 24% 25% 25% 26% 3.50E-07 0.075             50  
TST1 GATA1 8836 9027 27% 26% 23% 24% 25% 26% 25% 24% 3.90E-07 0.018             50  
TST1 RREB1 645 650 21% 19% 34% 25% 22% 23% 31% 24% 4.10E-07 0.0072             25  
NMYC PAX4 1300 1568 21% 30% 21% 27% 20% 31% 21% 28% 4.10E-07 2.60E-11 ****            25 50 25
HAND1E47 LYF1 8699 9597 27% 25% 24% 24% 27% 26% 24% 23% 4.30E-07 1.60E-09             25 25
XBP1 MZF1 1197 966 30% 27% 20% 22% 29% 26% 20% 24% 4.40E-07 0.001     **** ****      25 50  
NFAT P53 9401 10975 24% 23% 26% 27% 25% 23% 26% 26% 4.80E-07 2.90E-05              25 50  
CDPCR3HD P300 7450 8803 27% 26% 23% 24% 26% 26% 23% 24% 4.80E-07 1.80E-05             50  
NFKAPPAB65 GKLF 666 621 17% 27% 24% 32% 21% 25% 24% 30% 4.90E-07 0.008              25 50  
CDPCR3HD PAX4 5255 6036 24% 22% 27% 26% 23% 23% 27% 27% 4.90E-07 1.30E-09             25 25
ARP1 SRY 3381 4190 23% 22% 28% 27% 23% 23% 27% 28% 4.90E-07 1.70E-07 ****   **** ***      25 50 50
HFH3 NKX61 1386 1391 31% 26% 21% 22% 30% 30% 21% 19% 5.20E-07 6.50E-12 ****           25 25
TCF11 SRY 6144 7757 26% 24% 23% 27% 25% 25% 23% 27% 5.40E-07 2.50E-07     **       25 25
HFH3 HOXA3 5233 9273 26% 28% 22% 24% 26% 27% 24% 23% 5.50E-07 8.00E-07             25 50
RORA1 HNF4 4209 5196 28% 27% 23% 22% 27% 26% 23% 24% 5.80E-07 0.00014 ****            25 50  
NKX61 SOX5 1898 1714 21% 24% 30% 25% 22% 24% 26% 28% 5.90E-07 0.00072 ****           25  
SRY BRN2 7680 7534 26% 27% 23% 24% 28% 27% 22% 23% 6.10E-07 5.90E-14     ****       25 25
RFX1 HNF4 6441 7848 27% 27% 23% 23% 27% 26% 24% 24% 6.40E-07 0.0011     ****       25  
NFY AML1 5948 7105 23% 23% 27% 27% 24% 24% 26% 26% 7.10E-07 0.0056     ** ****     50  
SP1 HAND1E47 10219 9395 26% 27% 24% 23% 25% 27% 24% 24% 7.30E-07 0.0009     **** ****     25  
TST1 ELK1 9607 9617 26% 27% 23% 24% 26% 26% 24% 23% 7.30E-07 9.30E-06     **       50  
MYB RREB1 1393 1490 27% 29% 19% 24% 26% 28% 21% 26% 7.60E-07 0.0011 ****           25  
GR HOXA3 7437 9759 28% 25% 24% 23% 27% 26% 24% 24% 7.60E-07 1.00E-05             25  
SP1 AHRARNT 4842 1030 28% 26% 24% 22% 32% 27% 20% 22% 7.70E-07 1.60E-07     * **      50 200 25
TST1 LYF1 9480 9089 26% 27% 24% 24% 26% 26% 25% 23% 8.00E-07 0.0002     ** **      25 50  
CDPCR1 PAX4 4800 5484 24% 22% 27% 27% 24% 23% 26% 27% 8.60E-07 0.00012              25 50  
CDPCR3HD RREB1 1424 1558 22% 21% 27% 30% 23% 25% 26% 26% 8.80E-07 0.29 ****           50  
USF TCF11 6896 9152 25% 24% 28% 24% 25% 25% 27% 23% 9.20E-07 5.40E-07     **** ****     25 25
CEBPB AP2 4739 4269 23% 23% 27% 27% 24% 25% 26% 25% 9.30E-07 0.18     **** ****     25  
FOXD3 HOXA3 5091 5053 25% 28% 23% 24% 25% 28% 23% 23% 9.30E-07 1.20E-07             25 25
NFKAPPAB65 MZF1 1213 989 19% 28% 23% 29% 22% 26% 24% 28% 9.40E-07 0.044             25  
CEBP AREB6 2667 2887 24% 21% 28% 27% 22% 23% 29% 26% 9.40E-07 7.90E-08 ****            25 50 25
AP4 SP1 10397 8219 24% 24% 27% 25% 25% 23% 27% 25% 9.70E-07 0.00075     **** ****     25  
TCF11 ELK1 8268 10911 24% 24% 28% 25% 24% 25% 26% 25% 9.70E-07 0.00081     * *     25  
ZID GATA1 2649 2998 22% 22% 28% 28% 23% 22% 28% 26% 9.80E-07 2.60E-06 ****            25 50 200 25
PAX5 HNF4 4100 4252 25% 28% 22% 25% 26% 27% 23% 23% 9.90E-07 0.0002 ****            25 50  
RFX1 GR 5509 7725 23% 23% 27% 27% 24% 24% 26% 26% 1.00E-06 0.021     **** ****      25 50 25
FOXD3 SOX5 5605 5849 23% 23% 27% 27% 22% 23% 29% 27% 1.00E-06 2.30E-15             25 25
RORA1 MZF1 2854 2794 25% 29% 23% 23% 25% 31% 22% 22% 1.10E-06 8.00E-13 ****            25 50 25
SP1 PAX2 5900 6258 26% 28% 23% 23% 27% 27% 23% 23% 1.10E-06 2.80E-08     **** ****     25 25
RREB1 CP2 3620 2926 28% 26% 23% 23% 27% 26% 23% 24% 1.10E-06 0.0027 ****           50  
NFY IK1 5714 5837 23% 24% 26% 27% 23% 23% 27% 27% 1.30E-06 6.70E-07     **        25 50 25
RFX1 RFX1 7787 9391 27% 26% 23% 24% 27% 26% 24% 24% 1.30E-06 3.90E-06             50 50
MYOGNF1 PAX4 10249 9515 25% 27% 24% 24% 25% 27% 24% 24% 1.40E-06 5.70E-05              25 50  
GR SP1 5395 9669 22% 25% 28% 25% 23% 25% 27% 25% 1.40E-06 1.50E-06     **** ****     25 50
LMO2COM HOXA3 11203 7874 24% 25% 27% 25% 23% 24% 27% 26% 1.40E-06 1.80E-06             50 25
NF1 CMYB 10898 13076 27% 26% 24% 24% 27% 26% 24% 24% 1.50E-06 6.10E-10             50 50
ARP1 HOXA3 4295 5182 28% 26% 23% 23% 27% 26% 23% 24% 1.50E-06 0.0015 ****           50  
NFKAPPAB65 CREL 4139 3809 27% 27% 24% 22% 26% 26% 25% 23% 1.50E-06 0.007 ****           200  
GR PAX4 5199 6252 22% 26% 26% 26% 20% 26% 26% 28% 1.60E-06 <1E-16             25 25
ER GKLF 5595 6296 22% 24% 26% 27% 23% 24% 24% 28% 1.60E-06 1.00E-08             25 25
MEIS1A/HOXA9 GATA3 13269 16497 25% 27% 24% 24% 26% 25% 25% 24% 1.70E-06 0.02              25 50  
CEBP PBX1 7556 7008 25% 23% 27% 25% 23% 23% 29% 25% 1.80E-06 1.10E-16             25 25
FOXJ2 SOX9 9774 6431 27% 26% 24% 23% 27% 27% 22% 23% 1.80E-06 1.30E-10              25 50 25
LMO2COM 1-Oct 7066 7283 26% 27% 23% 23% 26% 27% 24% 23% 1.80E-06 1.60E-06             25 25
AP1FJ SRY 5566 7372 27% 26% 22% 26% 26% 25% 22% 27% 1.80E-06 3.10E-10     **** ****     25 25
CDPCR3HD SP1 5618 5920 27% 26% 22% 24% 26% 26% 24% 23% 1.80E-06 0.0039              25 50  
RORA1 GKLF 8070 8967 27% 26% 23% 24% 26% 27% 23% 24% 1.80E-06 8.90E-08             200 200
LMO2COM AREB6 2932 3529 22% 23% 28% 26% 23% 22% 27% 28% 1.90E-06 2.60E-07 ****           25 25
FOXJ2 ELK1 4370 4977 27% 27% 23% 23% 27% 26% 23% 24% 2.00E-06 5.50E-06 ****   **** ****      25 50 25
EGR1 PAX4 117 124 15% 13% 27% 44% 11% 14% 33% 42% 2.00E-06 3.10E-07     **** ****     25 25
NKX61 GKLF 837 759 22% 19% 32% 26% 18% 21% 36% 25% 2.00E-06 2.70E-12             25 25
SOX9 FOXD3 5364 5617 23% 24% 27% 27% 23% 22% 29% 26% 2.20E-06 2.20E-16             25 25
AREB6 CMYB 10586 13306 26% 27% 24% 24% 26% 26% 24% 24% 2.20E-06 5.40E-05     *** **     50  
1-Oct ELK1 10489 11111 27% 26% 24% 24% 27% 26% 24% 23% 2.30E-06 1.30E-06              25 50 50
HAND1E47 SRY 6042 7899 23% 24% 26% 27% 22% 24% 26% 27% 2.30E-06 2.20E-11     **** ****     25 25
RREB1 EN1 883 1036 19% 23% 30% 28% 22% 19% 30% 29% 2.30E-06 8.80E-08     **** ****     25 25
ZID IK1 4451 4534 23% 23% 27% 27% 24% 24% 26% 26% 2.40E-06 0.31 ****           50  
PAX2 PAX4 10669 13572 25% 27% 24% 24% 27% 26% 24% 24% 2.40E-06 1.70E-06             50 50
HFH3 SOX5 9161 6126 24% 23% 27% 26% 22% 23% 29% 26% 2.50E-06 7.80E-16              25 50 25
RFX1 CREL 5743 6158 24% 23% 25% 28% 24% 24% 26% 27% 2.60E-06 0.00011             25  
FOXD3 ELK1 3542 3913 23% 23% 27% 27% 22% 24% 28% 27% 2.70E-06 1.00E-08 ****   **** ****      25 50 25
USF SP1 11491 9503 24% 24% 27% 26% 24% 24% 26% 26% 2.90E-06 0.00099             25  
MEIS1A/HOXA9 ELK1 7956 10132 27% 26% 24% 23% 25% 26% 24% 24% 2.90E-06 0.069       *      25 50  
1-Oct GR 7278 8116 24% 23% 27% 26% 24% 23% 26% 27% 2.90E-06 2.90E-06             25 25
HNF1 GKLF 4634 4762 25% 28% 24% 23% 25% 29% 22% 24% 2.90E-06 3.50E-11             25 25
AML1 NKX25 3117 4382 25% 25% 29% 22% 26% 23% 27% 23% 3.00E-06 3.70E-05 ****           25  
MYOGNF1 HNF4 7972 9191 24% 23% 27% 26% 23% 24% 26% 27% 3.10E-06 1.90E-05             25  
MYCMAX SRY 4490 6220 27% 27% 23% 23% 27% 26% 23% 24% 3.10E-06 3.10E-06 ****   **** ****     25 25
MYB CMYB 12484 15605 23% 24% 26% 26% 24% 24% 26% 25% 3.20E-06 5.10E-05             50  
CDPCR3HD GATA3 10658 13038 27% 26% 24% 23% 26% 26% 23% 24% 3.30E-06 6.10E-07             50 50
RFX1 IK1 10600 11755 26% 26% 23% 24% 26% 26% 24% 24% 3.40E-06 4.70E-05              25 50 50
RREB1 SOX5 729 849 33% 21% 23% 22% 27% 27% 22% 24% 3.40E-06 0.071             25  
FOXJ2 IK1 7314 7892 27% 26% 24% 23% 27% 26% 23% 24% 3.40E-06 9.90E-07             50 50
NF1 EN1 6486 7419 26% 27% 23% 25% 27% 25% 23% 25% 3.50E-06 2.20E-05     **** ****     25  
COUP MZF1 6063 6537 24% 23% 26% 27% 23% 24% 27% 27% 3.50E-06 6.80E-07             50 50
AREB6 NF1 10377 12394 26% 26% 23% 24% 26% 27% 24% 24% 3.50E-06 3.80E-07     * ****     50 50
P300 NKX25 3755 4756 26% 28% 23% 23% 26% 27% 24% 23% 3.60E-06 0.00065 ****   *** *      25 50  
NFAT IRF1 422 410 32% 30% 21% 17% 26% 31% 22% 21% 3.80E-06 0.023             25  
CEBP HNF4 6415 7395 27% 26% 23% 24% 27% 26% 24% 23% 3.80E-06 3.80E-07             25 25
AML1 GKLF 6353 7720 27% 26% 24% 23% 25% 27% 25% 23% 3.90E-06 0.0001             50  
AML1 IK1 5151 6252 26% 27% 23% 24% 28% 26% 22% 24% 4.00E-06 3.40E-09              25 50 25
HOXA3 COMP1 7624 8467 25% 23% 27% 25% 24% 24% 27% 25% 4.20E-06 3.90E-05             25  
HFH3 AML1 2364 3056 27% 28% 24% 21% 28% 29% 22% 20% 4.40E-06 5.60E-16 ****           25 25
AP1FJ MSX1 6973 9392 24% 25% 27% 23% 23% 26% 27% 24% 4.50E-06 6.40E-09             25 25
MYOGNF1 AP4 9786 9770 25% 24% 27% 25% 24% 23% 28% 24% 4.60E-06 5.40E-10             25 25
HNF4 NF1 12726 15048 24% 24% 26% 26% 25% 23% 26% 26% 5.00E-06 7.50E-07             50 50
LMO2COM HNF1 6574 7004 27% 25% 23% 24% 27% 26% 23% 25% 5.20E-06 0.00016             25  
COUP ELK1 3223 4107 22% 24% 28% 26% 23% 25% 27% 26% 5.70E-06 0.002 ****   **** ****     25  
AML1 HAND1E47 5792 7615 26% 27% 23% 23% 26% 27% 24% 23% 5.70E-06 2.00E-06              25 50 25
MYCMAX ARP1 2367 3088 24% 24% 30% 23% 23% 24% 29% 24% 5.80E-06 9.50E-06 ****           25  
CEBP GATA1 5953 7043 27% 25% 23% 24% 27% 26% 24% 24% 5.90E-06 2.90E-05     ** **      25 50 25
SRY EN1 7707 8895 25% 23% 25% 27% 24% 23% 25% 28% 6.00E-06 1.50E-09       ***     25 25
ELK1 COMP1 12017 14397 26% 26% 24% 24% 25% 26% 25% 25% 6.00E-06 0.26     * *     50  
PAX6 NFAT 8693 8717 24% 23% 26% 26% 24% 23% 27% 26% 6.10E-06 2.10E-06             25 25
NFAT RREB1 2068 2076 23% 22% 26% 29% 23% 23% 26% 27% 6.10E-06 0.018 ****            25 50  
MYOGNF1 SP1 9050 7202 24% 23% 27% 25% 24% 25% 27% 25% 6.40E-06 0.0041     **** ****     25  
PAX5 GATA3 2769 3242 29% 26% 23% 23% 26% 26% 23% 24% 6.40E-06 0.0097 ****           50  
RFX1 SRY 4321 5544 27% 27% 23% 23% 27% 28% 22% 23% 6.60E-06 1.30E-14 ****   **** ****     25 25
MEIS1A/HOXA9 NF1 6628 8181 25% 26% 23% 27% 26% 25% 24% 24% 6.70E-06 0.012             25  
HNF1 P53 4128 4856 24% 23% 28% 24% 24% 25% 28% 24% 6.80E-06 0.00067 ****           25  
CEBP RREB1 1648 1777 20% 24% 27% 29% 22% 24% 26% 28% 7.70E-06 0.0011 ****   *        25 50 50
    total n total n mm % of each pattern hs[9]   % of each pattern mm[10]   Chi2 test[11] expression p value[12] TSS position bias[13] order p value (binomial) maxd[14]
name 1[15] name 2[16] hs mm 5'-3' 3'-5' 3'-3' 5'-5' 5'-3' 3'-5' 3'-3' 5'-5' p hs p mm hs mm hs mm hs mm hs mm
NOTES:
A) Click on header for brief explanation of entries in each column
B) Statistical significance:* = "p<0.01", ** = "p<0.001", *** = "p<0.0001", **** = "p<0.00001"
C) A gray shade in the TF names (columns 1 and 2) indicates that the order/orientation pattern was conserved between hs (humans) and mm (mouse, e.g. AP2-SP1 was significant both in hs and mm but TCF11-ARP1 was significant only in hs)
D) When an interaction was observed for multiple maxd values, here we report the values corresponding to the minimum Chi2 p value (i.e. the strongest evidence)
E) Entries marked in red correspond to the examples discussed in the text (Due to note D, the values reported here may not be the same as those quoted in the main text which may correspond to a different maxd)
F) For hs, 77% of the TF pairs reported here showed significant pattern biases for more than one value of maxd

[1]
Percentage of the total number of genes where the two motifs occurred within maxd showing each order/orientation pattern
[2]
Percentage of the total number of genes where the two motifs occurred within maxd showing each order/orientation pattern
[3]
p value for Chi2 test comparing actual distribution vs null hypothesis of uniform distribution
[4]
Permutation p value for the correlation between gene expression values for genes with the most prevalent order/orientation pattern
[5]
p value for t test comparing the distribution of positions with respect to the TSS of the two motifs
[6]
maxd parameter where the significant interactions were observed
[7]
TRANSFAC name for motif 1
[8]
TRANSFAC name for motif 2
[9]
Percentage of the total number of genes where the two motifs occurred within maxd showing each order/orientation pattern
[10]
Percentage of the total number of genes where the two motifs occurred within maxd showing each order/orientation pattern
[11]
p value for Chi2 test comparing actual distribution vs null hypothesis of uniform distribution
[12]
Permutation p value for the correlation between gene expression values for genes with the most prevalent order/orientation pattern
[13]
p value for t test comparing the distribution of positions with respect to the TSS of the two motifs
[14]
maxd parameter where the significant interactions were observed
[15]
TRANSFAC name for motif 1
[16]
TRANSFAC name for motif 2