Location of motif pairs/triplets/quadruplets in each transcript within the cluster set

t=transcript number

p=position of last motif with respect to ATG for each motif

affy=affymetrix probe id

nm=refseq accession number

ug=unigene accession number

chr=chromosome

pos=chromosomal position

strand=strand

Drosophila Mellanogaster

1 motifs = 173 215 0 0 thresholds = 8.143 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	457	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgtcccgaggcagcgg	10.83	1	tgactcgggaaaaatcg	10.28	1
2	-2535	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	tagctgccatttccgac	9.52	-1	tttcccgggaaaatttg	13.52	1
4	-258	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	cttccgccggcggacac	8.84	-1	cggcccgggaaaatgcg	11.39	1
6	-2527	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	gaggtccttcgcagcga	8.40	1	tatcccggggctatatg	11.53	1
7	-1891	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagtacctgggcagcag	9.32	1	cccataaccccggggca	11.49	-1
7	-1960	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cacctgccacgggccca	9.41	-1	cccataaccccggggca	11.49	-1
8	-1023	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggctcgttggcggggg	10.22	1	tggcccgagagaaagag	10.90	1

2 motifs = 35 258 0 0 thresholds = 10.187 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	552	403	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttttac	8.11	-1
3	-1139	-984	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttttac	8.11	-1
3	-1139	-998	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	ctttttac	9.53	1
4	-620	-759	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttttac	8.11	-1
5	-4899	-4845	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttatggca	11.06	-1	ctttttac	9.53	-1
7	791	621	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatggca	11.06	-1	ctttttac	9.53	-1
9	2319	2399	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttggct	10.39	-1	ttttttac	8.11	-1
9	2222	2399	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttttac	8.11	-1
10	-1982	-1792	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttttac	8.11	-1
10	-1982	-2063	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttttac	8.11	-1
10	-2076	-2063	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttttac	8.11	-1
10	-2076	-2193	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttttac	8.11	-1
11	-2657	-2773	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	ttttttac	8.11	-1
13	-335	-419	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	gtaaaaaa	8.11	1

3 motifs = 231 264 0 0 thresholds = 9.716 ||7.927 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3417	-3474	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
1	-3633	-3474	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
1	-3633	-3691	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	aacccgtt	8.11	1
1	-3633	-3732	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	aacgggtt	8.11	-1
1	-3633	-3807	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
2	-1246	-1171	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
2	-1246	-1307	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
2	-1246	-1337	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	aacccttt	9.05	1
2	-1246	-1371	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
3	-1130	-1010	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	aacggatt	7.93	-1
3	-3852	-3750	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	aacggatt	7.93	-1
4	623	738	NM_078946	ll.36039	eve	NaN	NaN	NaN	cataaaaa	9.72	-1	aacgggtt	8.11	-1
5	-3734	-3859	NM_079253	ll.38995	h	NaN	NaN	NaN	cataaaaa	9.72	-1	aacgggtt	8.11	-1
6	-2842	-2835	NM_078700	ll.33059	run	NaN	NaN	NaN	cataaaaa	9.72	-1	aaagggtt	9.05	-1
6	-2842	-2989	NM_078700	ll.33059	run	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaggatt	8.87	-1
8	-4075	-4016	NM_164966	ll.34569	salm	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaggatt	8.87	-1
10	-1991	-2159	NM_080310	ll.31227	gt	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaggatt	8.87	-1
11	-2578	-2440	NM_164546	ll.33583	odd	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaggatt	8.87	-1
12	-1634	-1815	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaggatt	8.87	-1

4 motifs = 214 215 0 0 thresholds = 9.417 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1908	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgccgccc	10.46	-1	ctaattaccccgggaaa	13.46	-1
4	-535	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcccgccc	9.90	-1	cggcccgggaaaatgcg	11.39	1
4	-2534	-2616	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttgggccgcac	9.83	-1	tttcccggggctacttg	12.31	1
7	-1976	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttgggcggccc	9.79	-1	cccataaccccggggca	11.49	-1
8	-923	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgcggctc	10.49	-1	tggcccgagagaaagag	10.90	1

5 motifs = 129 205 0 0 thresholds = 10.270 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	12	-175	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcccggggcaagaagg	12.39	1	ccgcagagcctcgc	9.17	1
5	-403	-229	NM_079253	ll.38995	h	NaN	NaN	NaN	cccgcgagccacgggg	10.66	-1	gcgtctcgcagcgg	9.87	-1
5	-403	-513	NM_079253	ll.38995	h	NaN	NaN	NaN	cccgcgagccacgggg	10.66	-1	gcagagcccagcag	9.94	-1
6	-2565	-2439	NM_078700	ll.33059	run	NaN	NaN	NaN	tcccggggctatatgg	11.38	1	cagctgagagcggc	10.53	1
6	-2565	-2519	NM_078700	ll.33059	run	NaN	NaN	NaN	tcccggggctatatgg	11.38	1	tcgcagcgagcggc	11.77	1
7	-1963	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cccacctgccacgggc	12.18	-1	ccgctgtgagtggc	10.37	1

6 motifs = 205 215 0 0 thresholds = 9.121 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-175	10	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccgcagagcctcgc	9.17	1	tttcccggggcaagaag	12.08	1
4	-175	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccgcagagcctcgc	9.17	1	cggcccgggaaaatgcg	11.39	1
4	-384	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	cggcagggattcgc	10.02	1	cggcccgggaaaatgcg	11.39	1
5	-229	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgtctcgcagcgg	9.87	-1	cccattcccgcgagcca	10.49	-1
5	-513	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	gcagagcccagcag	9.94	-1	cccattcccgcgagcca	10.49	-1
6	-2439	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	cagctgagagcggc	10.53	1	tatcccggggctatatg	11.53	1
6	-2519	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	tcgcagcgagcggc	11.77	1	tatcccggggctatatg	11.53	1
7	-1906	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctgtgagtggc	10.37	1	cccataaccccggggca	11.49	-1

7 motifs = 215 248 0 0 thresholds = 10.281 ||8.379 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-2616	-2513	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcccggggctacttg	12.31	1	tcgctcac	8.38	-1
5	-408	-363	NM_079253	ll.38995	h	NaN	NaN	NaN	cccattcccgcgagcca	10.49	-1	ccgctcac	9.24	-1
6	-2567	-2434	NM_078700	ll.33059	run	NaN	NaN	NaN	tatcccggggctatatg	11.53	1	ccgctctc	8.71	-1
8	-862	-719	NM_164966	ll.34569	salm	NaN	NaN	NaN	tggcccgagagaaagag	10.90	1	ccgctcac	9.24	-1

8 motifs = 231 258 0 0 thresholds = 9.716 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3633	-3759	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	-1
2	543	403	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
2	-1732	-1591	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
3	-446	-645	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	-1
3	-531	-645	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	-1
3	-1130	-984	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
3	-1130	-998	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	1
4	-943	-759	NM_078946	ll.36039	eve	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
5	-3734	-3661	NM_079253	ll.38995	h	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
9	2213	2399	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
10	-1991	-1792	NM_080310	ll.31227	gt	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
10	-1991	-2063	NM_080310	ll.31227	gt	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
11	-2578	-2773	NM_164546	ll.33583	odd	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
11	-2666	-2773	NM_164546	ll.33583	odd	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
12	841	949	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	ttttttac	8.11	-1
12	-1403	-1596	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	-1
12	-1634	-1596	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	ctttttac	9.53	-1
13	755	771	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	tttttatg	9.72	1	ttttttac	8.11	-1

9 motifs = 95 139 0 0 thresholds = 10.183 ||9.819 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2915	-2866	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaacatc	10.33	-1	aattccgccgaa	10.61	-1
1	-4239	-4276	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	atttccagcgaa	11.51	-1
5	-4451	-4316	NM_079253	ll.38995	h	NaN	NaN	NaN	tcggccaggagg	11.56	-1	acttccagcgaa	11.27	-1
6	-2617	-2644	NM_078700	ll.33059	run	NaN	NaN	NaN	n	NaN	NaN	atttcccgggaa	10.83	-1
12	-1717	-1624	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcggccagcatc	11.01	-1	atttccacgtaa	10.05	-1

10 motifs = 174 215 0 0 thresholds = 8.500 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	-241	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	tcgcgctcgc	10.07	-1	cccattcccgcgagcca	10.49	-1
6	-2514	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	ggccgctcgc	9.06	-1	tatcccggggctatatg	11.53	1
7	-2101	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctcgctcgc	9.63	-1	cccataaccccggggca	11.49	-1
8	-663	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	tctcgctcgc	9.76	-1	tggcccgagagaaagag	10.90	1
8	-964	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	tctcgctcgc	9.76	-1	tggcccgagagaaagag	10.90	1

11 motifs = 43 231 0 0 thresholds = 10.138 ||9.716 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-268	-446	NM_079143	ll.38012	kr	NaN	NaN	NaN	caatttgcatat	12.28	-1	cataaaaa	9.72	-1
7	-1714	-1650	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cattttgaattt	10.23	-1	cataaaaa	9.72	-1
8	674	840	NM_164966	ll.34569	salm	NaN	NaN	NaN	caatttgaatat	11.55	-1	cataaaaa	9.72	-1
9	2350	2213	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	caatttgaatat	11.55	-1	cataaaaa	9.72	-1
11	-2482	-2578	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	cataaaaa	9.72	-1
11	-2482	-2666	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	cataaaaa	9.72	-1
12	4341	4413	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgatttgaattt	11.11	-1	cataaaaa	9.72	-1
13	569	755	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	agatgcaaaatg	10.14	1	tttttatg	9.72	1

12 motifs = 201 215 0 0 thresholds = 8.916 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	459	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtcccgaggcagcgg	10.14	1	tgactcgggaaaaatcg	10.28	1
4	-168	10	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgctgccgcagagc	10.35	-1	tttcccggggcaagaag	12.08	1
4	-168	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgctgccgcagagc	10.35	-1	cggcccgggaaaatgcg	11.39	1
5	-242	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	cgcgtctcgcagcgg	9.87	1	cccattcccgcgagcca	10.49	-1
6	-2525	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	ggtccttcgcagcga	10.91	1	tatcccggggctatatg	11.53	1

13 motifs = 215 237 0 0 thresholds = 10.281 ||7.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-2616	-2519	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcccggggctacttg	12.31	1	gtgagcga	7.48	-1
5	-408	-369	NM_079253	ll.38995	h	NaN	NaN	NaN	cccattcccgcgagcca	10.49	-1	gtgagcgg	9.02	-1
6	-2567	-2508	NM_078700	ll.33059	run	NaN	NaN	NaN	tatcccggggctatatg	11.53	1	gcgagcgg	9.02	-1
8	-862	-713	NM_164966	ll.34569	salm	NaN	NaN	NaN	tggcccgagagaaagag	10.90	1	gtgagcgg	9.02	-1

14 motifs = 58 203 0 0 thresholds = 10.008 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-577	-417	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	aaaaaggcagctgca	9.63	1
4	-1666	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	acctgcaattg	11.22	-1	cactgctctcgtttt	10.63	-1
6	-2633	-2495	NM_078700	ll.33059	run	NaN	NaN	NaN	accggcaatcg	10.16	-1	caaaaggcagcgctg	10.84	1
7	-765	-732	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	ttccgcacacatttg	9.93	-1
9	2863	2955	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	agctgcaattt	10.32	-1	caaaaggcagcaaag	9.50	1

15 motifs = 203 215 0 0 thresholds = 9.319 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2483	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaaaagtcagcgcag	10.54	1	tttcccgggaaaatttg	13.52	1
4	-105	10	NM_078946	ll.36039	eve	NaN	NaN	NaN	caaaggccggcggag	12.05	1	tttcccggggcaagaag	12.08	1
6	-2495	-2567	NM_078700	ll.33059	run	NaN	NaN	NaN	caaaaggcagcgctg	10.84	1	tatcccggggctatatg	11.53	1
8	-930	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	caaaggtgagccgca	9.86	1	tggcccgagagaaagag	10.90	1

16 motifs = 61 64 0 0 thresholds = 9.840 ||7.766 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3233	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	ttctcgcgatttt	9.27	-1
5	605	669	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	tttttcttttttc	9.74	-1
5	605	660	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	gaaaaaagaaaaa	9.74	1
6	-4608	-4455	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gtttttttttttt	8.02	-1
6	-4608	-4580	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	cttttccgctttt	10.27	-1
8	4248	4364	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	ctctctccttttc	9.03	-1
8	4248	4336	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	tttttttgctttc	8.27	-1
9	-4182	-4292	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	atttgtcattttt	8.75	-1
10	-2207	-2057	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	tttttacgttttt	10.72	-1
13	-1312	-1168	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccgttggccgattg	11.86	1	tttttgccttttg	8.09	-1

17 motifs = 163 215 0 0 thresholds = 8.570 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-520	-674	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcagccaaaacggctccgcccatg	9.63	-1	tttcccgcggaaaaagg	11.56	1
5	-209	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	gcggcgatttagcctacgaacctg	11.13	-1	cccattcccgcgagcca	10.49	-1
7	-1959	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacctgccacgggcccac	12.43	-1	cccataaccccggggca	11.49	-1
8	-1032	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctgccaagggctcgttggcggg	8.57	1	tggcccgagagaaagag	10.90	1

18 motifs = 102 175 0 0 thresholds = 10.493 ||8.737 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2551	2497	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttgcgtttttaataa	11.21	1	tgctgtgctat	8.90	-1
2	728	798	NM_079463	ll.40287	kni	NaN	NaN	NaN	tgttgtgatcataaaaa	11.52	1	tgctgagctct	9.85	-1
3	-3043	-2901	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttaacattccaaaa	10.97	-1	tgctggtctct	9.07	-1
5	398	214	NM_079253	ll.38995	h	NaN	NaN	NaN	tctttcgagaaaaataa	10.65	1	tgctgctcttt	9.25	-1
7	-485	-329	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttttgaaaca	12.89	-1	tgctatgcttt	9.13	-1
8	-114	-192	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttccctcacaaaaa	11.79	1	cgctggccttt	9.23	-1

19 motifs = 43 170 0 0 thresholds = 10.138 ||8.294 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-379	-353	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccttttgcattt	10.18	-1	aatgagcgagtcag	9.09	1
1	-379	-363	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccttttgcattt	10.18	-1	tcagagcgagagag	9.45	1
4	-3040	-3198	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttgcatct	11.46	-1	ctccttcgctcctt	9.57	-1
4	-3040	-3206	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttgcatct	11.46	-1	aaggagcgaaggag	9.57	-1
6	-589	-423	NM_078700	ll.33059	run	NaN	NaN	NaN	cgctttgaattt	10.57	-1	cactctctctctct	9.81	-1
7	-1714	-1525	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cattttgaattt	10.23	-1	cgcactcgctgtat	11.07	-1
8	2032	1876	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttgcatat	11.84	-1	cacactcgctgttt	11.55	-1
11	-2482	-2361	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	agtcagccagtgcg	8.64	1

20 motifs = 233 268 0 0 thresholds = 7.728 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3439	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctacctg	8.64	-1	ttttatga	6.70	-1
2	646	736	NM_079463	ll.40287	kni	NaN	NaN	NaN	tctacctg	8.68	-1	ttttatga	6.70	-1
2	646	656	NM_079463	ll.40287	kni	NaN	NaN	NaN	tctacctg	8.68	-1	ttttatga	6.70	-1
2	646	550	NM_079463	ll.40287	kni	NaN	NaN	NaN	tctacctg	8.68	-1	ttttatgg	6.31	-1
2	-1302	-1253	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	ttttatga	6.70	-1
2	-1302	-1318	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	ttttatgc	6.31	-1
2	-1302	-1348	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	ttttatgg	6.31	-1
3	-1012	-1125	NM_079143	ll.38012	kr	NaN	NaN	NaN	tctacctg	8.68	-1	ttttatgt	6.34	-1
3	-1012	-1137	NM_079143	ll.38012	kr	NaN	NaN	NaN	tctacctg	8.68	-1	acataaaa	6.34	1
3	-1190	-1125	NM_079143	ll.38012	kr	NaN	NaN	NaN	cctaccta	7.98	-1	ttttatgt	6.34	-1
3	-1190	-1137	NM_079143	ll.38012	kr	NaN	NaN	NaN	cctaccta	7.98	-1	acataaaa	6.34	1
4	-2197	-2384	NM_078946	ll.36039	eve	NaN	NaN	NaN	cctaccta	7.98	-1	ttttatga	6.70	-1
5	-4620	-4704	NM_079253	ll.38995	h	NaN	NaN	NaN	cctacctg	8.89	-1	ttttatgg	6.31	-1
6	-3129	-3071	NM_078700	ll.33059	run	NaN	NaN	NaN	cctacctg	8.89	-1	ttttatgg	6.31	-1
6	-3129	-3309	NM_078700	ll.33059	run	NaN	NaN	NaN	cctacctg	8.89	-1	ttttatgg	6.31	-1
7	-4098	-4041	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tctaccta	7.77	-1	ttttatgt	6.34	-1
7	-4098	-4069	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tctaccta	7.77	-1	ttttatgt	6.34	-1
9	-1480	-1417	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gctaccta	7.73	-1	ttttatgc	6.31	-1
10	-2208	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	tctacctg	8.68	-1	ttttatgg	6.31	-1

21 motifs = 87 216 0 0 thresholds = 9.586 ||9.583 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-4003	-3966	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	atttgcataattt	10.62	-1
4	-4465	-4578	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	agatgaataattt	10.94	-1
7	-583	-433	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttttgtctaattt	9.93	-1
7	-583	-648	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttatgaaaaattt	10.67	-1
8	3654	3562	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccatttggcc	10.29	-1	ttataattaattt	10.70	-1
9	3164	3290	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgggc	11.67	-1	atttatttaattt	10.61	-1
12	3866	3701	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcccttttggc	10.32	-1	agttacataattt	9.84	-1

22 motifs = 87 212 0 0 thresholds = 9.586 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-396	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	caaaatgcagcgccagaaaatgcaaa	10.71	1
2	-539	-606	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccgttttggc	10.72	-1	aaaaaccggcggactttgaaaagaaa	10.47	1
2	-1578	-1570	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	tttacaagccttttgtgcgttttttc	10.04	-1
2	-1578	-1671	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	aaaaaaaaaaaaaaaacggtgggcaa	10.06	1
2	-1578	-1709	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	aaaaaaaaaaaaaaaacggtgggcaa	10.06	1
4	-4465	-4398	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	tttaagattaatagtattgtattttg	10.25	-1
4	-4465	-4612	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	aaaaattgggttcactgtatataaaa	9.93	1
4	-4465	-4645	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	tttgagctacgttacttacatttttc	10.75	-1
5	-961	-1119	NM_079253	ll.38995	h	NaN	NaN	NaN	gcccttttggc	10.32	-1	aacaaaacaacaaataatatatgaaa	9.93	1
7	-583	-641	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	tttcaaccataaatttgaaatttttc	10.15	-1
8	4174	4343	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccgtttggcc	10.57	-1	aaaaaaacagctgcgactgagggaaa	9.54	1
9	-887	-957	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgtgc	10.72	-1	tttcttcttataataagtttattttg	12.20	-1
12	3866	4028	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcccttttggc	10.32	-1	aaaaatgttagatggaatgactaaaa	10.10	1

23 motifs = 196 212 0 0 thresholds = 9.196 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2505	2685	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctgccagatagcacagc	10.06	-1	gaaaaactacgcaaatcaaagtgaaa	10.76	1
2	-2532	-2359	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctgccatttccgacagc	9.84	-1	tttcccgggaaaatttgtcatttttt	9.88	-1
2	-2532	-2416	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctgccatttccgacagc	9.84	-1	gttacttttttattgtgttttttttt	10.93	-1
2	-2532	-2435	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctgccatttccgacagc	9.84	-1	gttacttttttattgtgttttttttt	10.93	-1
4	-2331	-2377	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcagccctcgattcccgc	10.85	-1	tttgttgctctttttatgagtttttt	12.04	-1
5	857	998	NM_079253	ll.38995	h	NaN	NaN	NaN	gctggcgtagctgcccac	11.33	-1	aaaaactgacttcatgcgagtccaaa	9.58	1
5	857	676	NM_079253	ll.38995	h	NaN	NaN	NaN	gctggcgtagctgcccac	11.33	-1	aaaaacactctgagccagaccaaaaa	10.39	1
5	-2055	-2125	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgcctctgccgccgac	10.09	-1	tttttttttcttttttgtttattttc	14.83	-1
5	-2079	-2125	NM_079253	ll.38995	h	NaN	NaN	NaN	tctgccgacgctgaccgc	10.68	1	tttttttttcttttttgtttattttc	14.83	-1
5	-2170	-2125	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgccaacgttttccga	10.04	-1	tttttttttcttttttgtttattttc	14.83	-1
6	-4694	-4867	NM_078700	ll.33059	run	NaN	NaN	NaN	gccggcagcactgccagc	11.66	1	aaaaaacacccccagaacgcagaaaa	10.62	1
7	-1894	-1719	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgagtacctgggcagc	10.33	1	ttttaatttatttaaaaaccattttg	11.56	-1
8	1801	1964	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	tttattcgcatgtctttctttttttt	10.94	-1
8	1801	1899	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	tttttttctttttttagcttactttg	10.10	-1
8	1801	1728	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	tttatgcgattttgttgtactttttt	11.69	-1
9	5357	5219	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttcgggttctggggcagc	9.77	1	caaaattcagcaagatcagaaacaaa	10.62	1
12	3269	3180	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgccgccgacgacgac	9.60	-1	ttttattttatttatttatgttattt	10.33	-1

24 motifs = 61 87 0 0 thresholds = 9.840 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	-858	-961	NM_079253	ll.38995	h	NaN	NaN	NaN	ccactgcccgatcg	10.48	1	gcccttttggc	10.32	-1
6	-2618	-2498	NM_078700	ll.33059	run	NaN	NaN	NaN	caatcggccatcgg	11.86	-1	gccttttgtac	9.59	-1
8	4248	4174	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	gccgtttggcc	10.57	-1
12	-1692	-1739	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgactgcccgactg	10.26	1	gccttttgggc	11.72	-1

25 motifs = 93 268 0 0 thresholds = 10.453 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1656	1708	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttgtcggcaa	10.76	-1	ttttatgc	6.31	-1
2	-2063	-2148	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttaggcca	11.20	-1	ttttatgg	6.31	-1
3	-1140	-1125	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttatggcaa	11.20	-1	ttttatgt	6.34	-1
7	-570	-641	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttttcggcca	11.15	-1	ttttatga	6.70	-1
7	-3091	-3174	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgggcaa	11.70	-1	ttttatgg	6.31	-1
7	-4065	-4041	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgtgcaa	11.19	-1	ttttatgt	6.34	-1
8	-3305	-3206	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgtttgcca	10.55	-1	ttttatgt	6.34	-1
8	-3305	-3257	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgtttgcca	10.55	-1	ttttatga	6.70	-1
10	-2264	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttttaggcaa	11.51	-1	ttttatgg	6.31	-1
11	-2568	-2659	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttttatggcca	10.89	-1	ttttatgg	6.31	-1
12	4430	4542	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttataggcaa	11.60	-1	ttttatgt	6.34	-1
12	4430	4406	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttataggcaa	11.60	-1	ttttatga	6.70	-1
12	2813	2621	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttttaaggcaa	10.67	-1	ttttatgg	6.31	-1
12	-610	-416	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttatttgcca	11.33	-1	ttttatga	6.70	-1
12	-610	-775	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttatttgcca	11.33	-1	ttttatga	6.70	-1
12	-1712	-1627	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttgtcggcca	10.45	-1	ttttatga	6.70	-1
13	-919	-824	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgcccataaaa	11.70	1	ccataaaa	6.31	1

26 motifs = 189 215 0 0 thresholds = 8.353 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2224	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	catccatccacccatcc	8.56	-1	tttcccgggaaaatttg	13.52	1
4	-2483	-2616	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggacagtcggctcgtgg	8.35	1	tttcccggggctacttg	12.31	1
7	-1961	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccacctgccacgggccc	12.22	-1	cccataaccccggggca	11.49	-1
8	-1023	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggctcgttggcggggg	8.97	1	tggcccgagagaaagag	10.90	1

27 motifs = 88 192 0 0 thresholds = 9.584 ||9.983 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1666	1673	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctcccagcga	9.70	-1	cgctcccagcgacggcggc	11.51	-1
6	-13	-62	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	cacaaacgccggcagagcc	13.10	-1
6	-4676	-4636	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gccgcagccgcagtcgcag	10.57	1
6	-4676	-4724	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gccgctgccgacgtcgctg	11.75	1
7	234	200	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccagcgc	10.43	-1	cgctctgccgccgtttctg	11.69	1
8	4309	4437	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	cggcaacagcaacagcagc	10.29	-1
8	4309	4261	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	cagcagcagcagcagcacc	11.29	-1
11	202	59	NM_164546	ll.33583	odd	NaN	NaN	NaN	cggccaacga	9.58	-1	cagcggcagcagcagcagc	10.48	-1
12	-4315	-4469	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	gccgctgccgctgcttgcg	13.90	1

28 motifs = 43 268 0 0 thresholds = 10.138 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3156	-3136	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgctttgcatgt	10.48	-1	ttttatga	6.70	-1
3	-268	-411	NM_079143	ll.38012	kr	NaN	NaN	NaN	caatttgcatat	12.28	-1	ttttatga	6.70	-1
3	-268	-439	NM_079143	ll.38012	kr	NaN	NaN	NaN	caatttgcatat	12.28	-1	ttttatgt	6.34	-1
7	-1714	-1657	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cattttgaattt	10.23	-1	ttttatga	6.70	-1
8	674	847	NM_164966	ll.34569	salm	NaN	NaN	NaN	caatttgaatat	11.55	-1	ttttatga	6.70	-1
8	-4609	-4487	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttgaattt	11.11	-1	ttttatgg	6.31	-1
9	2350	2220	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	caatttgaatat	11.55	-1	ttttatgg	6.31	-1
11	-2482	-2571	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	ttttatgg	6.31	-1
11	-2482	-2659	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	ttttatgg	6.31	-1
12	4341	4406	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgatttgaattt	11.11	-1	ttttatga	6.70	-1
13	569	762	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	agatgcaaaatg	10.14	1	ttttatgg	6.31	-1

29 motifs = 139 264 0 0 thresholds = 9.819 ||7.927 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2866	-2921	NM_169233	ll.41032	hb	NaN	NaN	NaN	aattccgccgaa	10.61	-1	aaaggatt	8.87	-1
2	-1562	-1371	NM_079463	ll.40287	kni	NaN	NaN	NaN	aattccgcgtaa	9.84	-1	aaagggtt	9.05	-1
5	-4316	-4472	NM_079253	ll.38995	h	NaN	NaN	NaN	acttccagcgaa	11.27	-1	aaagggtt	9.05	-1
6	-2644	-2835	NM_078700	ll.33059	run	NaN	NaN	NaN	atttcccgggaa	10.83	-1	aaagggtt	9.05	-1
12	-1624	-1815	NM_057311	ll.34669	nub	NaN	NaN	NaN	atttccacgtaa	10.05	-1	aaaggatt	8.87	-1

30 motifs = 58 67 0 0 thresholds = 10.008 ||8.587 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-577	-755	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	ctaacaatgatacatttt	9.83	-1
3	-3075	-3009	NM_079143	ll.38012	kr	NaN	NaN	NaN	acctgcaattt	10.72	-1	caataagcttcatttttt	8.93	-1
6	-1635	-1468	NM_078700	ll.33059	run	NaN	NaN	NaN	atctgcaatct	10.13	-1	taatttttgggacatttt	10.26	-1
7	-765	-643	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	ccataaatttgaaatttt	9.53	-1
7	-765	-958	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	aaaaaattttttatttga	11.72	1
8	3646	3806	NM_164966	ll.34569	salm	NaN	NaN	NaN	aactgcaattg	11.28	-1	ctatctgcatatcttttt	8.87	-1
9	6032	5874	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	atctgcaatcg	10.64	-1	aaaatatgaaataaattt	10.45	1
9	6032	5857	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	atctgcaatcg	10.64	-1	aaaaagtcaattagttgg	9.75	1
12	2466	2367	NM_057311	ll.34669	nub	NaN	NaN	NaN	agcggcaattg	10.07	-1	tcatcttttgatgatttt	9.43	-1
13	-1337	-1440	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caattgcagtt	11.28	1	aaaatgactggaatatat	8.77	1
13	-1337	-1470	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caattgcagtt	11.28	1	aaaatgactggaatatat	8.77	1

31 motifs = 80 95 0 0 thresholds = 10.181 ||10.183 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-443	-391	NM_169233	ll.41032	hb	NaN	NaN	NaN	gagatgccaaaaaa	10.97	1	tcggccaaaatg	10.55	-1
8	4335	4249	NM_164966	ll.34569	salm	NaN	NaN	NaN	agaaagcaaaaaaa	11.35	1	tcggccagcagc	11.80	-1
10	-2045	-2206	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttttcgctgaat	10.56	-1	tcggccatcagg	11.43	-1
11	-2727	-2657	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttttcgcaggcc	10.93	-1	tcggccataaag	10.55	-1

32 motifs = 43 238 0 0 thresholds = 10.138 ||7.759 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3156	-3258	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgctttgcatgt	10.48	-1	aaagacac	8.13	-1
1	-3156	-3268	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgctttgcatgt	10.48	-1	gtgtcttt	8.13	1
4	-3040	-3008	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttgcatct	11.46	-1	aaaggtac	7.85	-1
8	3755	3889	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccatttgcatat	11.50	-1	aaagacac	8.13	-1
8	2032	2138	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttgcatat	11.84	-1	aaaggtac	7.85	-1
9	2350	2242	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	caatttgaatat	11.55	-1	aaagacac	8.13	-1
10	-3221	-3356	NM_080310	ll.31227	gt	NaN	NaN	NaN	cactttgcatat	11.75	-1	aaagacac	8.13	-1
11	-2482	-2312	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctatttgcatgt	10.36	-1	aaagacac	8.13	-1

33 motifs = 95 244 0 0 thresholds = 10.183 ||7.578 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-391	-464	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaatg	10.55	-1	cagaaatc	8.46	-1
2	-60	-12	NM_079463	ll.40287	kni	NaN	NaN	NaN	tcggccagtagg	11.18	-1	cagaaatc	8.46	-1
7	2030	1962	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcggccagagag	10.30	-1	cagaaatc	8.46	-1
11	-2657	-2536	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	cggaaacc	7.97	-1
12	-1717	-1813	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcggccagcatc	11.01	-1	cagaaatc	8.46	-1

34 motifs = 64 215 0 0 thresholds = 7.766 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	670	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttcattttttt	10.03	-1	tgactcgggaaaaatcg	10.28	1
2	452	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttccttatttt	9.87	-1	tgactcgggaaaaatcg	10.28	1
2	409	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttactgtttc	9.63	-1	tgactcgggaaaaatcg	10.28	1
2	-1711	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttttttttt	10.56	-1	ctaattaccccgggaaa	13.46	-1
2	-1847	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttctcattttttc	8.06	-1	ctaattaccccgggaaa	13.46	-1
2	-1932	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttattatttt	9.10	-1	ctaattaccccgggaaa	13.46	-1
2	-2360	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	atttgtcattttt	8.75	-1	tttcccgggaaaatttg	13.52	1
4	-340	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgcattttc	10.14	-1	cggcccgggaaaatgcg	11.39	1
4	-541	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcgccgtttt	10.42	-1	cggcccgggaaaatgcg	11.39	1
5	-439	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	ttcttcctttttg	7.93	-1	cccattcccgcgagcca	10.49	-1
7	-1994	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gttttacattttt	8.49	-1	cccataaccccggggca	11.49	-1
8	-852	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctctctttc	8.92	-1	tggcccgagagaaagag	10.90	1

35 motifs = 58 87 0 0 thresholds = 10.008 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-577	-420	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	gcctttttggc	10.78	-1
6	-2633	-2498	NM_078700	ll.33059	run	NaN	NaN	NaN	accggcaatcg	10.16	-1	gccttttgtac	9.59	-1
7	-765	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	gccttttgtgc	10.78	-1
8	3646	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	aactgcaattg	11.28	-1	gccatttggcc	10.29	-1

36 motifs = 144 201 0 0 thresholds = 9.481 ||8.916 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2976	2987	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttcgcagctcgc	11.14	-1	tcgctgctaagctgg	9.28	-1
2	612	459	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttcgcagcactc	11.11	-1	gtcccgaggcagcgg	10.14	1
4	1640	1655	NM_078946	ll.36039	eve	NaN	NaN	NaN	atcgcagcgacc	10.33	-1	tcgctgcgattggcc	10.54	-1
6	-2510	-2525	NM_078700	ll.33059	run	NaN	NaN	NaN	ttcgcagcgagc	12.12	-1	ggtccttcgcagcga	10.91	1
7	-4446	-4461	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttcgcagcgagc	12.12	-1	ctcctttcgcagcga	9.95	1
8	2025	2010	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttcgcagcgatt	10.61	-1	gttggttcgcagcga	9.31	1
8	-395	-410	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttcgcagcgagc	12.12	-1	gaacgttcgcagcga	10.92	1

37 motifs = 258 265 0 0 thresholds = 7.840 ||7.455 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2870	2816	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctttttac	9.53	-1	tttcccgc	8.23	-1
2	403	470	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttac	8.11	-1	tttcccgc	8.23	-1
3	-4142	-4306	NM_079143	ll.38012	kr	NaN	NaN	NaN	ctttttac	9.53	-1	tttcccgc	8.23	-1
4	-759	-588	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttac	8.11	-1	attccctc	7.46	-1
6	-4340	-4461	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttttac	8.11	-1	tttcccta	8.22	-1
8	4517	4360	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctttttac	9.53	-1	tttccctc	9.22	-1
9	2399	2230	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttac	8.11	-1	tttcccta	8.22	-1
12	-3094	-3010	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttttac	8.11	-1	tttccctc	9.22	-1

38 motifs = 163 214 0 0 thresholds = 8.570 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1289	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcaacgcccctggccacgcccccc	10.39	-1	tttgcccgctc	10.40	-1
4	-2146	-2236	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtgcaccttcggcggaaccgcagg	10.61	1	attgcccgctc	9.42	-1
5	915	825	NM_079253	ll.38995	h	NaN	NaN	NaN	gcagccaccacgcgacgcacgcgc	8.76	-1	ttgggcggcac	9.83	-1
6	-695	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	cgaacccctccgcaggagggccgc	11.10	1	tttggcggccc	10.92	-1
6	-4716	-4532	NM_078700	ll.33059	run	NaN	NaN	NaN	gcagcgacgtcggcagcggcttcc	8.90	-1	attggcggcac	9.98	-1
7	-1959	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacctgccacgggcccac	12.43	-1	ttgggcggccc	9.79	-1
8	-1032	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctgccaagggctcgttggcggg	8.57	1	ttttgcggctc	10.49	-1

39 motifs = 61 124 0 0 thresholds = 9.840 ||8.419 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3580	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	tctttttgtt	9.81	-1
5	605	671	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	tttttctttt	9.11	-1
5	605	440	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	ttttgttttt	9.11	-1
5	605	421	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	tttttttttt	10.36	-1
6	-4608	-4453	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	ttttgttttt	9.11	-1
8	4248	4424	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	tgttgctgtt	8.48	-1
8	4248	4284	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	tgttgctgtt	8.48	-1
8	4248	4084	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	tgttgctgtt	8.48	-1
8	4248	4078	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	aaaagcaaca	9.07	-1
10	-2207	-2066	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	tgctgttttt	8.80	-1
10	-2207	-2402	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	tttttttttt	10.36	-1
12	-1692	-1805	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgactgcccgactg	10.26	1	tccttttttt	8.88	-1

40 motifs = 74 88 0 0 thresholds = 9.608 ||9.584 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1718	1666	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctgctctcag	10.27	-1	ctcccagcga	9.70	-1
6	-49	-13	NM_078700	ll.33059	run	NaN	NaN	NaN	gctgctcgccg	10.40	-1	ctgccaacga	10.82	-1
9	4264	4088	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgctcgccg	11.37	-1	cttccagcga	10.11	-1
11	180	202	NM_164546	ll.33583	odd	NaN	NaN	NaN	gccgctctccg	11.52	-1	cggccaacga	9.58	-1

41 motifs = 48 241 0 0 thresholds = 7.864 ||8.467 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-379	-496	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttgcattt	10.51	-1	n	NaN	NaN
1	-634	-496	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttcctgtt	7.87	-1	n	NaN	NaN
1	-3890	-3805	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttacattt	8.38	-1	cgaaaggg	9.07	-1
1	-3977	-3805	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttacattt	8.38	-1	cgaaaggg	9.07	-1
2	-2658	-2544	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttcgcattt	9.65	-1	n	NaN	NaN
2	-2658	-2647	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttcgcattt	9.65	-1	cgaaaggg	9.07	-1
3	-1993	-2004	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttccccttt	8.56	-1	n	NaN	NaN
3	-2454	-2465	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttccattg	9.82	-1	cgaaaggg	9.07	-1
4	-338	-536	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcgcattt	9.65	-1	ggaaaggg	9.07	-1
4	-543	-536	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgcctttt	10.31	-1	ggaaaggg	9.07	-1
4	-642	-536	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttggccttt	8.39	-1	ggaaaggg	9.07	-1
5	433	294	NM_079253	ll.38995	h	NaN	NaN	NaN	tttggctttg	8.51	-1	n	NaN	NaN
6	-644	-786	NM_078700	ll.33059	run	NaN	NaN	NaN	tttcccattt	10.20	-1	ggaaaggg	9.07	-1
8	-3973	-3936	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttccctttt	9.93	-1	cgaaaggg	9.07	-1
9	-4284	-4134	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttgccattc	7.86	-1	ggaaaggg	9.07	-1
10	-238	-189	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgcccttt	8.94	-1	n	NaN	NaN
10	-238	-330	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgcccttt	8.94	-1	cgaaaggg	9.07	-1
10	-238	-351	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgcccttt	8.94	-1	ggaaaggg	9.07	-1
10	-245	-189	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggccaaa	8.39	-1	n	NaN	NaN
10	-245	-330	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggccaaa	8.39	-1	cgaaaggg	9.07	-1
10	-245	-351	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggccaaa	8.39	-1	ggaaaggg	9.07	-1
10	-518	-330	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttcccattg	8.95	-1	cgaaaggg	9.07	-1
10	-518	-351	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttcccattg	8.95	-1	ggaaaggg	9.07	-1
11	67	-127	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttgctttt	10.25	-1	n	NaN	NaN
11	-2157	-2185	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttccattt	11.07	-1	cgaaaggg	9.07	-1
11	-2253	-2185	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttgcctttg	9.06	-1	cgaaaggg	9.07	-1
12	-2371	-2195	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttcctttt	10.80	-1	cgaaaggg	9.07	-1
12	-2371	-2393	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttcctttt	10.80	-1	ggaaaggg	9.07	-1
12	-3133	-3019	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttgccattg	9.33	-1	n	NaN	NaN
13	1489	1383	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	tttcccattt	10.20	-1	n	NaN	NaN

42 motifs = 88 173 0 0 thresholds = 9.584 ||8.143 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1666	1657	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctcccagcga	9.70	-1	tcgctgcgattggccgc	9.95	-1
6	-13	-19	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	gtcgacagaggcggcga	10.37	1
6	-13	-60	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	gtcgacagaggcggcga	10.37	1
6	-13	-184	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	tacctgccccggcaccc	9.78	-1
6	-4676	-4597	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ccgctgccgccgcgctg	8.70	-1
6	-4676	-4708	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ccgctgccgacgtcgct	8.26	-1
7	234	240	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ctgccgccgtttctgtc	9.14	-1
8	4309	4364	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	cagctgcgactgaggga	8.23	-1
8	4309	4242	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	gccagcagcagcagcag	8.42	1
9	2836	2960	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ggcagcaaaggcagcca	9.86	1
11	202	43	NM_164546	ll.33583	odd	NaN	NaN	NaN	cggccaacga	9.58	-1	ctgctgccgctgagcga	9.94	-1
12	-4315	-4453	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	tcgccgccgctgccgct	8.52	-1

43 motifs = 45 266 0 0 thresholds = 9.535 ||7.467 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	323	378	NM_169233	ll.41032	hb	NaN	NaN	NaN	gccgctcccc	9.60	-1	aagcgaga	7.85	-1
5	1246	1080	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgccagcc	10.48	-1	gagcggga	8.35	-1
7	-1973	-2109	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacc	9.76	-1	gagcgagc	7.47	-1
10	-208	-285	NM_080310	ll.31227	gt	NaN	NaN	NaN	gcggccagcc	9.94	-1	gagcggga	8.35	-1
11	-70	122	NM_164546	ll.33583	odd	NaN	NaN	NaN	gccgctcgcc	10.01	-1	aagcgaga	7.85	-1
12	-442	-373	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctgcccgcc	10.41	-1	gagcggga	8.35	-1
13	-2215	-2116	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggggggcggc	10.39	1	gctcgctc	7.47	-1
13	-2215	-2172	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggggggcggc	10.39	1	gagcgagc	7.47	-1

44 motifs = 40 88 0 0 thresholds = 10.127 ||9.584 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1221	-1192	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttgtaaatattgcttt	12.05	-1	ctgccaacgc	9.82	-1
5	-4286	-4317	NM_079253	ll.38995	h	NaN	NaN	NaN	actccaatatttaccaa	10.22	1	cttccagcga	10.11	-1
6	131	-13	NM_078700	ll.33059	run	NaN	NaN	NaN	aaacgaattttttccaa	10.22	1	ctgccaacga	10.82	-1
9	2543	2577	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttccaataattctatt	10.56	-1	cggccagcga	10.19	-1
12	1650	1517	NM_057311	ll.34669	nub	NaN	NaN	NaN	ataaaaatatttattaa	12.18	1	ctcccagcga	9.70	-1

45 motifs = 214 224 0 0 thresholds = 9.417 ||9.031 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-3476	-3291	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttggcggcac	10.96	-1	gctgccccctcccg	10.82	-1
5	825	914	NM_079253	ll.38995	h	NaN	NaN	NaN	ttgggcggcac	9.83	-1	cgcgtggtggctgc	11.03	1
6	-678	-685	NM_078700	ll.33059	run	NaN	NaN	NaN	tttggcggccc	10.92	-1	cccgcccccgcccc	9.03	-1
6	-678	-703	NM_078700	ll.33059	run	NaN	NaN	NaN	tttggcggccc	10.92	-1	cccgcccccgcccc	9.03	-1
6	-2874	-3069	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttgcggccc	10.46	-1	cccgtggcggcggc	10.60	1
6	-4532	-4598	NM_078700	ll.33059	run	NaN	NaN	NaN	attggcggcac	9.98	-1	gctgccgccgcgct	10.74	-1
6	-4532	-4697	NM_078700	ll.33059	run	NaN	NaN	NaN	attggcggcac	9.98	-1	gctgccgacgtcgc	9.03	-1
6	-4532	-4709	NM_078700	ll.33059	run	NaN	NaN	NaN	attggcggcac	9.98	-1	gctgccgacgtcgc	9.03	-1
7	-1976	-1969	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttgggcggccc	9.79	-1	gcggcccacctgcc	9.62	-1
9	1549	1648	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	attgccggctc	9.42	-1	cccgagtgggcggc	9.81	1

46 motifs = 95 258 0 0 thresholds = 10.183 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4239	-4342	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	ctttttac	9.53	-1
10	-2206	-2063	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcggccatcagg	11.43	-1	ttttttac	8.11	-1
10	-2206	-2193	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcggccatcagg	11.43	-1	ttttttac	8.11	-1
11	-2657	-2773	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	ttttttac	8.11	-1
12	-1717	-1596	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcggccagcatc	11.01	-1	ctttttac	9.53	-1

47 motifs = 61 268 0 0 thresholds = 9.840 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	ttttatga	6.70	-1
5	-4224	-4048	NM_079253	ll.38995	h	NaN	NaN	NaN	cacttggccagcag	11.38	-1	ttttatgt	6.34	-1
9	-4182	-4088	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	ttttatgg	6.31	-1
10	-2207	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	ttttatgg	6.31	-1
12	-1692	-1627	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgactgcccgactg	10.26	1	ttttatga	6.70	-1

48 motifs = 58 146 0 0 thresholds = 10.008 ||8.014 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-577	-437	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	cgttttttgg	8.72	-1
1	-577	-531	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	tgttttttgg	9.27	-1
4	-1666	-1611	NM_078946	ll.36039	eve	NaN	NaN	NaN	acctgcaattg	11.22	-1	cgtttgtttg	8.70	-1
4	-1666	-1621	NM_078946	ll.36039	eve	NaN	NaN	NaN	acctgcaattg	11.22	-1	caaacaaaca	9.24	-1
6	204	126	NM_078700	ll.33059	run	NaN	NaN	NaN	accggcaattg	10.47	-1	cgtttgtttg	8.70	-1
7	-765	-905	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	tttttgttgg	9.46	-1
8	3646	3811	NM_164966	ll.34569	salm	NaN	NaN	NaN	aactgcaattg	11.28	-1	tttttttttg	11.20	-1
9	4965	4797	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	acctgcaattg	11.22	-1	cttttttttg	10.66	-1
12	2466	2541	NM_057311	ll.34669	nub	NaN	NaN	NaN	agcggcaattg	10.07	-1	cttttttttg	10.66	-1

49 motifs = 64 196 0 0 thresholds = 7.766 ||9.196 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2636	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttccatttc	9.59	-1	gctgccagatagcacagc	10.06	-1
1	2561	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttcccgtttt	10.65	-1	gctgccagatagcacagc	10.06	-1
1	2554	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaacgcaaaac	8.57	-1	gctgccagatagcacagc	10.06	-1
1	2324	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttctctttgtttc	7.84	-1	gctgccagatagcacagc	10.06	-1
2	774	695	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttcccagtttc	10.06	-1	gttgcataatccggcagc	9.35	1
2	670	695	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttcattttttt	10.03	-1	gttgcataatccggcagc	9.35	1
2	513	695	NM_079463	ll.40287	kni	NaN	NaN	NaN	attttctattttt	8.49	-1	gttgcataatccggcagc	9.35	1
2	-1932	-2055	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttattatttt	9.10	-1	gtgggtacctaagccagc	9.89	1
2	-2360	-2532	NM_079463	ll.40287	kni	NaN	NaN	NaN	atttgtcattttt	8.75	-1	gctgccatttccgacagc	9.84	-1
4	-340	-163	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgcattttc	10.14	-1	gctgccgcagagcctcgc	10.14	-1
4	-2411	-2331	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttttctttc	8.92	-1	gcagccctcgattcccgc	10.85	-1
5	669	857	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttcttttttc	9.74	-1	gctggcgtagctgcccac	11.33	-1
5	660	857	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaaaaagaaaaa	9.74	1	gctggcgtagctgcccac	11.33	-1
5	-1882	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	ttctgacattttt	8.92	-1	gccgcctctgccgccgac	10.09	-1
5	-1882	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	ttctgacattttt	8.92	-1	tctgccgacgctgaccgc	10.68	1
5	-2125	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctcgttttttt	8.94	-1	gccgcctctgccgccgac	10.09	-1
5	-2125	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctcgttttttt	8.94	-1	tctgccgacgctgaccgc	10.68	1
5	-2125	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctcgttttttt	8.94	-1	gccgccaacgttttccga	10.04	-1
5	-2138	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaaaagaaaata	8.49	-1	gccgcctctgccgccgac	10.09	-1
5	-2138	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaaaagaaaata	8.49	-1	tctgccgacgctgaccgc	10.68	1
5	-2138	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaaaagaaaata	8.49	-1	gccgccaacgttttccga	10.04	-1
5	-2147	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	cttttttgctttt	8.76	1	gccgcctctgccgccgac	10.09	-1
5	-2147	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	cttttttgctttt	8.76	1	tctgccgacgctgaccgc	10.68	1
5	-2147	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	cttttttgctttt	8.76	1	gccgccaacgttttccga	10.04	-1
5	-2156	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgtttatttt	8.65	1	gccgcctctgccgccgac	10.09	-1
5	-2156	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgtttatttt	8.65	1	tctgccgacgctgaccgc	10.68	1
5	-2156	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgtttatttt	8.65	1	gccgccaacgttttccga	10.04	-1
5	-2212	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	ctttggctgtttt	9.47	-1	gccgcctctgccgccgac	10.09	-1
5	-2212	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	ctttggctgtttt	9.47	-1	tctgccgacgctgaccgc	10.68	1
5	-2212	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	ctttggctgtttt	9.47	-1	gccgccaacgttttccga	10.04	-1
6	-4580	-4694	NM_078700	ll.33059	run	NaN	NaN	NaN	cttttccgctttt	10.27	-1	gccggcagcactgccagc	11.66	1
7	-1994	-1894	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gttttacattttt	8.49	-1	gctgagtacctgggcagc	10.33	1
8	1964	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtctttctttttt	8.37	-1	tttgtgacctatggcagc	10.70	1
8	1950	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtctttctttttt	8.37	-1	tttgtgacctatggcagc	10.70	1
8	1888	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttcttttt	9.97	-1	tttgtgacctatggcagc	10.70	1
9	5386	5357	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttcttgcattttt	10.37	-1	ttcgggttctggggcagc	9.77	1
9	5344	5357	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	attttgctttttc	9.02	-1	ttcgggttctggggcagc	9.77	1
12	3070	3269	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctttgccagtttt	9.42	-1	gccgccgccgacgacgac	9.60	-1

50 motifs = 71 93 0 0 thresholds = 9.884 ||10.453 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2131	2281	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggctgcactcgttgtggccaca	12.55	1	ttttttgtgcca	10.80	-1
7	-3044	-3091	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gattgcactcgcattggccata	12.27	1	ttttatgggcaa	11.70	-1
9	-2251	-2423	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttggccacggattcggccgcc	11.71	-1	ttttattggcca	11.83	-1
11	-2554	-2568	NM_164546	ll.33583	odd	NaN	NaN	NaN	tatggccatcgttcctgctttc	11.97	-1	tttttatggcca	10.89	-1
13	-4669	-4729	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gtttgccatgcacacagccccc	11.68	-1	ttttatgtgcaa	11.19	-1

51 motifs = 48 196 0 0 thresholds = 7.864 ||9.196 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2637	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttccattt	11.07	-1	gctgccagatagcacagc	10.06	-1
2	-2658	-2532	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttcgcattt	9.65	-1	gctgccatttccgacagc	9.84	-1
4	-338	-163	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcgcattt	9.65	-1	gctgccgcagagcctcgc	10.14	-1
4	-2371	-2331	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttccattg	9.82	-1	gcagccctcgattcccgc	10.85	-1
5	-2125	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	gccgcctctgccgccgac	10.09	-1
5	-2125	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	tctgccgacgctgaccgc	10.68	1
5	-2125	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	gccgccaacgttttccga	10.04	-1
7	-1996	-1894	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttacattt	8.38	-1	gctgagtacctgggcagc	10.33	1
8	1962	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttacattt	8.38	-1	tttgtgacctatggcagc	10.70	1
8	1648	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgctttg	8.99	-1	tttgtgacctatggcagc	10.70	1
9	5342	5357	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttgctttt	10.25	-1	ttcgggttctggggcagc	9.77	1
12	3099	3269	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttgcctttg	9.06	-1	gccgccgccgacgacgac	9.60	-1

52 motifs = 100 268 0 0 thresholds = 9.655 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3466	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacaaaaaacg	11.76	1	ttttatga	6.70	-1
1	-3466	-3640	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacaaaaaacg	11.76	1	ttttatgg	6.31	-1
2	665	736	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgcgaaaaaaatg	10.54	1	ttttatga	6.70	-1
2	665	656	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgcgaaaaaaatg	10.54	1	ttttatga	6.70	-1
2	665	550	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgcgaaaaaaatg	10.54	1	ttttatgg	6.31	-1
3	-392	-411	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgaagataattcg	10.77	1	ttttatga	6.70	-1
3	-392	-439	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgaagataattcg	10.77	1	ttttatgt	6.34	-1
3	-392	-524	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgaagataattcg	10.77	1	ttttatga	6.70	-1
4	1163	1155	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcgcaaataattcg	11.78	1	ttttatga	6.70	-1
7	-404	-344	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	ttttatgc	6.31	-1
7	-585	-641	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.06	1	ttttatga	6.70	-1
10	-2050	-1984	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgtttttttttcgc	11.80	-1	ttttatgg	6.31	-1
10	-2050	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgtttttttttcgc	11.80	-1	ttttatgg	6.31	-1
13	-1029	-915	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	ccataaaa	6.31	1

53 motifs = 174 205 0 0 thresholds = 8.500 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1629	1715	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcccgctcgc	10.86	-1	ctgcagagcgcagc	10.88	1
5	-241	-146	NM_079253	ll.38995	h	NaN	NaN	NaN	tcgcgctcgc	10.07	-1	gctacgctccgcaa	9.54	-1
5	-241	-229	NM_079253	ll.38995	h	NaN	NaN	NaN	tcgcgctcgc	10.07	-1	gcgtctcgcagcgg	9.87	-1
6	-2514	-2439	NM_078700	ll.33059	run	NaN	NaN	NaN	ggccgctcgc	9.06	-1	cagctgagagcggc	10.53	1
7	-2101	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctcgctcgc	9.63	-1	ccgctgtgagtggc	10.37	1
8	1995	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcccgctggc	9.71	-1	tcgcagcgatttgc	10.53	1

54 motifs = 61 72 0 0 thresholds = 9.840 ||9.948 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3459	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	aaaaacggcagcca	11.09	1
5	605	698	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	aaaaaaggccgcaa	10.96	1
6	-2618	-2496	NM_078700	ll.33059	run	NaN	NaN	NaN	caatcggccatcgg	11.86	-1	acaaaaggcagcgc	10.50	1
8	4248	4344	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	n	NaN	NaN

55 motifs = 93 231 0 0 thresholds = 10.453 ||9.716 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1656	1715	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttgtcggcaa	10.76	-1	cataaaaa	9.72	-1
2	-2063	-2155	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttaggcca	11.20	-1	cataaaaa	9.72	-1
3	-1140	-1130	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttatggcaa	11.20	-1	cataaaaa	9.72	-1
4	795	623	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttttggcca	11.74	-1	cataaaaa	9.72	-1
7	-570	-634	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttttcggcca	11.15	-1	cataaaaa	9.72	-1
7	-3091	-3102	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgggcaa	11.70	-1	cataaaaa	9.72	-1
7	-4065	-4034	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgtgcaa	11.19	-1	cataaaaa	9.72	-1
11	-2568	-2578	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttttatggcca	10.89	-1	cataaaaa	9.72	-1
11	-2568	-2666	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttttatggcca	10.89	-1	cataaaaa	9.72	-1
12	4430	4413	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttataggcaa	11.60	-1	cataaaaa	9.72	-1
12	2813	2614	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttttaaggcaa	10.67	-1	cataaaaa	9.72	-1
12	-1712	-1634	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttgtcggcca	10.45	-1	cataaaaa	9.72	-1
12	-3507	-3498	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttttatgcaa	11.01	-1	cataaaaa	9.72	-1
13	-919	-817	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgcccataaaa	11.70	1	cataaaaa	9.72	-1

56 motifs = 41 208 0 0 thresholds = 9.521 ||8.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-330	-344	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctttcactc	9.67	-1	cccactctctcgc	10.45	-1
1	-478	-344	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcactt	10.10	-1	cccactctctcgc	10.45	-1
2	-295	-444	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	ctcactcactcga	8.75	-1
2	-326	-444	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctctctc	12.50	-1	ctcactcactcga	8.75	-1
4	1425	1361	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctctctctctc	12.50	-1	ctcgcccgcccgc	11.26	-1
5	-3015	-2970	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctctttctc	10.62	-1	ctcccctaccccc	10.11	-1
6	-509	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctc	12.70	-1	accacccgccccc	9.28	-1
6	-533	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctt	11.40	-1	accacccgccccc	9.28	-1
7	-196	-210	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctctctctctt	11.20	-1	cccgctctctcgc	10.42	-1
8	-625	-723	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctc	10.52	-1	cccgctcactccc	10.92	-1
8	-665	-627	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	ctctcccgctcgc	10.65	-1
8	-665	-723	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	cccgctcactccc	10.92	-1
8	-846	-723	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccctctctctc	10.96	-1	cccgctcactccc	10.92	-1
8	-846	-972	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccctctctctc	10.96	-1	ctcgctctctcga	8.51	-1
8	-966	-1104	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	ctcactcactccc	10.51	-1
8	-966	-1114	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	gggagtgagtgag	10.51	1
8	-1090	-972	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	ctcgctctctcga	8.51	-1
8	-1090	-1104	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	ctcactcactccc	10.51	-1
8	-1090	-1114	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	gggagtgagtgag	10.51	1
8	-1098	-972	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagcgaaagag	10.97	1	ctcgctctctcga	8.51	-1
8	-1098	-1114	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagcgaaagag	10.97	1	gggagtgagtgag	10.51	1
8	-1110	-972	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgag	9.58	1	ctcgctctctcga	8.51	-1
8	-1997	-2113	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctttctc	10.62	-1	ctgtcccaccccc	9.08	-1
8	-2383	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctcgcac	9.68	-1	ctcccccaacccc	9.48	-1
8	-2707	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctccctctc	10.32	-1	ctcccccaacccc	9.48	-1
9	1303	1500	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ctctctcgctg	10.91	-1	cgccgccaccccc	8.98	-1
13	-2106	-1931	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccctctcgctc	11.16	-1	gcgggagagagcg	9.24	1

57 motifs = 180 196 0 0 thresholds = 8.225 ||9.196 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2443	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	tgtgtggtgcactttct	8.36	-1	gctgccagatagcacagc	10.06	-1
1	2380	2505	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaatatccacaaaag	9.79	1	gctgccagatagcacagc	10.06	-1
2	870	695	NM_079463	ll.40287	kni	NaN	NaN	NaN	agaaaagcattcaaaat	8.95	1	gttgcataatccggcagc	9.35	1
2	-1929	-2055	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttttattattttt	11.79	-1	gtgggtacctaagccagc	9.89	1
2	-2244	-2055	NM_079463	ll.40287	kni	NaN	NaN	NaN	cgttttatcccttttcc	8.68	-1	gtgggtacctaagccagc	9.89	1
2	-2432	-2532	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttgtgcgttacttttt	9.23	-1	gctgccatttccgacagc	9.84	-1
2	-2452	-2532	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttgtgcgttacttttt	9.23	-1	gctgccatttccgacagc	9.84	-1
4	-2377	-2331	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgttgctctttttat	11.26	-1	gcagccctcgattcccgc	10.85	-1
4	-2386	-2331	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaaaaactcataaaaag	10.17	-1	gcagccctcgattcccgc	10.85	-1
4	-2445	-2331	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgtggcctctttttg	9.03	-1	gcagccctcgattcccgc	10.85	-1
5	668	857	NM_079253	ll.38995	h	NaN	NaN	NaN	ataaaaatacgaaaaaa	11.62	1	gctggcgtagctgcccac	11.33	-1
5	658	857	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaaaaagaaaaacact	9.68	1	gctggcgtagctgcccac	11.33	-1
5	-1912	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	acaaaacgcacaacact	8.99	1	gccgcctctgccgccgac	10.09	-1
5	-1912	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	acaaaacgcacaacact	8.99	1	tctgccgacgctgaccgc	10.68	1
5	-2136	-2055	NM_079253	ll.38995	h	NaN	NaN	NaN	cgtttttttttcttttt	10.57	-1	gccgcctctgccgccgac	10.09	-1
5	-2136	-2079	NM_079253	ll.38995	h	NaN	NaN	NaN	cgtttttttttcttttt	10.57	-1	tctgccgacgctgaccgc	10.68	1
5	-2136	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	cgtttttttttcttttt	10.57	-1	gccgccaacgttttccga	10.04	-1
5	-2363	-2170	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttgccacagtttat	9.10	-1	gccgccaacgttttccga	10.04	-1
6	-4844	-4694	NM_078700	ll.33059	run	NaN	NaN	NaN	cgaaagaaaataaaaaa	10.85	1	gccggcagcactgccagc	11.66	1
6	-4879	-4694	NM_078700	ll.33059	run	NaN	NaN	NaN	cgaaagaaaataaaaaa	10.85	1	gccggcagcactgccagc	11.66	1
7	-1708	-1894	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	attttgaatttatttag	9.04	-1	gctgagtacctgggcagc	10.33	1
8	1951	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttttctgttttt	12.42	-1	tttgtgacctatggcagc	10.70	1
8	1890	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgtttttttcttttttt	12.27	-1	tttgtgacctatggcagc	10.70	1
8	1729	1801	NM_164966	ll.34569	salm	NaN	NaN	NaN	attttgttgtacttttt	9.24	-1	tttgtgacctatggcagc	10.70	1
9	5398	5357	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttaatgtattttt	10.81	-1	ttcgggttctggggcagc	9.77	1
12	3164	3269	NM_057311	ll.34669	nub	NaN	NaN	NaN	tgttttattttatttat	11.32	-1	gccgccgccgacgacgac	9.60	-1

58 motifs = 88 98 0 0 thresholds = 9.584 ||8.718 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1192	-1203	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctgccaacgc	9.82	-1	tttccccaccccc	11.39	-1
4	1666	1705	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctcccagcga	9.70	-1	ccaccccgcgccc	8.99	-1
6	-4676	-4748	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ctccccatccccc	9.03	-1
8	4309	4507	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	tacccccttcccc	8.86	-1
12	-4315	-4470	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	ctccccctcgccg	9.89	-1

59 motifs = 80 233 0 0 thresholds = 10.181 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	730	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcctgtt	10.75	-1	tctacctg	8.68	-1
2	462	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttttgcgtccc	11.63	-1	tctacctg	8.68	-1
3	-3610	-3430	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttttcgcgactc	10.58	-1	tctacctg	8.68	-1
3	-3610	-3480	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttttcgcgactc	10.58	-1	tctacctg	8.68	-1
4	-2023	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	tgttttggccgacc	11.08	-1	cctaccta	7.98	-1
6	-605	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	gcgtggcgaaaaaa	11.15	1	cctacctg	8.89	-1
6	-678	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	gggccgccaaaaca	10.89	1	cctacctg	8.89	-1
10	-2045	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttttcgctgaat	10.56	-1	tctacctg	8.68	-1

60 motifs = 69 178 0 0 thresholds = 9.888 ||8.704 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2340	2512	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgcacacaca	10.99	-1	gccagatagcacagcaccatcc	10.61	-1
2	-99	-60	NM_079463	ll.40287	kni	NaN	NaN	NaN	cgcactcaca	9.89	-1	gccaaagagttcggccagtagg	8.81	-1
5	-332	-261	NM_079253	ll.38995	h	NaN	NaN	NaN	cgcacacaca	10.99	-1	cggtcgtgtggctcgcgctcgc	10.00	1
6	-293	-135	NM_078700	ll.33059	run	NaN	NaN	NaN	aacacacaca	10.74	-1	gccaaccacaccaccataccgc	10.34	-1
8	-1310	-1145	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacacaca	12.44	-1	ctgcgctgccgagcgagatggc	10.65	1
8	-2370	-2333	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgcacacaca	10.99	-1	gctctctgcttggcctggtggc	12.09	1
8	-2370	-2359	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgcacacaca	10.99	-1	gctctctgcttggcctggtggc	12.09	1
8	-2542	-2359	NM_164966	ll.34569	salm	NaN	NaN	NaN	aacacacaca	10.74	-1	gctctctgcttggcctggtggc	12.09	1
12	-93	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	cacactcaca	11.34	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-191	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	aacacacaca	10.74	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-217	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	cacactcaca	11.34	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-288	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	cacacacaca	12.44	-1	gcccacgagcgaaccacaaacg	8.71	-1
13	-3746	-3879	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	tgtgtgtgtg	12.44	1	gccatattgccctgcacctacc	8.88	-1

61 motifs = 270 270 0 0 thresholds = 7.035 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3698	-3725	NM_169233	ll.41032	hb	NaN	NaN	NaN	caaccctttg	7.52	-1	taacccgttc	9.05	-1
1	-3698	-3800	NM_169233	ll.41032	hb	NaN	NaN	NaN	caaccctttg	7.52	-1	taaccctttc	9.65	-1
1	-3698	-3866	NM_169233	ll.41032	hb	NaN	NaN	NaN	caaccctttg	7.52	-1	taacccttta	8.57	-1
1	-3725	-3698	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccgttc	9.05	-1	caaccctttg	7.52	-1
1	-3725	-3800	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccgttc	9.05	-1	taaccctttc	9.65	-1
1	-3725	-3866	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccgttc	9.05	-1	taacccttta	8.57	-1
1	-3800	-3698	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaccctttc	9.65	-1	caaccctttg	7.52	-1
1	-3800	-3725	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaccctttc	9.65	-1	taacccgttc	9.05	-1
1	-3800	-3866	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaccctttc	9.65	-1	taacccttta	8.57	-1
1	-3866	-3698	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccttta	8.57	-1	caaccctttg	7.52	-1
1	-3866	-3725	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccttta	8.57	-1	taacccgttc	9.05	-1
1	-3866	-3800	NM_169233	ll.41032	hb	NaN	NaN	NaN	taacccttta	8.57	-1	taaccctttc	9.65	-1
2	-1178	-1248	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taactctttt	8.30	-1
2	-1178	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1178	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1178	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	caaccctttt	8.65	-1
2	-1248	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	taactctttt	8.30	-1	taaccctttt	10.31	-1
2	-1248	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	taactctttt	8.30	-1	taaccctttt	10.31	-1
2	-1248	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	taactctttt	8.30	-1	taaccctttt	10.31	-1
2	-1248	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	taactctttt	8.30	-1	caaccctttt	8.65	-1
2	-1314	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1314	-1248	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taactctttt	8.30	-1
2	-1314	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1314	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	caaccctttt	8.65	-1
2	-1344	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1344	-1248	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taactctttt	8.30	-1
2	-1344	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	taaccctttt	10.31	-1
2	-1344	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	taaccctttt	10.31	-1	caaccctttt	8.65	-1
2	-1364	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	caaccctttt	8.65	-1	taaccctttt	10.31	-1
2	-1364	-1248	NM_079463	ll.40287	kni	NaN	NaN	NaN	caaccctttt	8.65	-1	taactctttt	8.30	-1
2	-1364	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	caaccctttt	8.65	-1	taaccctttt	10.31	-1
2	-1364	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	caaccctttt	8.65	-1	taaccctttt	10.31	-1
2	-4029	-4184	NM_079463	ll.40287	kni	NaN	NaN	NaN	caaccccttt	7.36	-1	taagcctttc	7.61	-1
2	-4184	-4029	NM_079463	ll.40287	kni	NaN	NaN	NaN	taagcctttc	7.61	-1	caaccccttt	7.36	-1
5	-3852	-3935	NM_079253	ll.38995	h	NaN	NaN	NaN	aaacccgttt	7.96	-1	taactctttt	8.30	-1
5	-3935	-3852	NM_079253	ll.38995	h	NaN	NaN	NaN	taactctttt	8.30	-1	aaacccgttt	7.96	-1
5	-4465	-4571	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaccctttc	7.30	-1	taatcctttc	8.21	-1
5	-4465	-4593	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaccctttc	7.30	-1	taatcctttc	8.21	-1
5	-4571	-4465	NM_079253	ll.38995	h	NaN	NaN	NaN	taatcctttc	8.21	-1	gaaccctttc	7.30	-1
5	-4571	-4593	NM_079253	ll.38995	h	NaN	NaN	NaN	taatcctttc	8.21	-1	taatcctttc	8.21	-1
5	-4593	-4465	NM_079253	ll.38995	h	NaN	NaN	NaN	taatcctttc	8.21	-1	gaaccctttc	7.30	-1
5	-4593	-4571	NM_079253	ll.38995	h	NaN	NaN	NaN	taatcctttc	8.21	-1	taatcctttc	8.21	-1
6	-934	-951	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaaggctta	8.27	1	aaatcctttt	7.12	1
6	-951	-934	NM_078700	ll.33059	run	NaN	NaN	NaN	aaatcctttt	7.12	1	aaaaggctta	8.27	1
6	-2826	-2842	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaagggttg	8.65	1	tgatcctttt	7.26	1
6	-2826	-2996	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaagggttg	8.65	1	taatcctttg	7.74	-1
6	-2842	-2826	NM_078700	ll.33059	run	NaN	NaN	NaN	tgatcctttt	7.26	1	aaaagggttg	8.65	1
6	-2842	-2996	NM_078700	ll.33059	run	NaN	NaN	NaN	tgatcctttt	7.26	1	taatcctttg	7.74	-1
6	-2996	-2826	NM_078700	ll.33059	run	NaN	NaN	NaN	taatcctttg	7.74	-1	aaaagggttg	8.65	1
6	-2996	-2842	NM_078700	ll.33059	run	NaN	NaN	NaN	taatcctttg	7.74	-1	tgatcctttt	7.26	1
9	6435	6278	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	taaccctttg	9.18	-1	tcaccccttt	7.63	-1
9	6278	6435	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tcaccccttt	7.63	-1	taaccctttg	9.18	-1
10	-252	-325	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccccttt	7.63	-1	aaaccctttc	7.90	-1
10	-325	-252	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaccctttc	7.90	-1	tcaccccttt	7.63	-1
10	-2216	-2408	NM_080310	ll.31227	gt	NaN	NaN	NaN	caacccgttc	7.40	-1	gaaccctttt	7.96	-1
10	-2408	-2216	NM_080310	ll.31227	gt	NaN	NaN	NaN	gaaccctttt	7.96	-1	caacccgttc	7.40	-1
10	-2408	-2497	NM_080310	ll.31227	gt	NaN	NaN	NaN	gaaccctttt	7.96	-1	tcaccctttt	8.92	-1
10	-2408	-2537	NM_080310	ll.31227	gt	NaN	NaN	NaN	gaaccctttt	7.96	-1	tcaccctttt	8.92	-1
10	-2497	-2408	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	gaaccctttt	7.96	-1
10	-2497	-2537	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	tcaccctttt	8.92	-1
10	-2497	-2619	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	taacccatta	7.41	-1
10	-2537	-2408	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	gaaccctttt	7.96	-1
10	-2537	-2497	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	tcaccctttt	8.92	-1
10	-2537	-2619	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcaccctttt	8.92	-1	taacccatta	7.41	-1
10	-2619	-2497	NM_080310	ll.31227	gt	NaN	NaN	NaN	taacccatta	7.41	-1	tcaccctttt	8.92	-1
10	-2619	-2537	NM_080310	ll.31227	gt	NaN	NaN	NaN	taacccatta	7.41	-1	tcaccctttt	8.92	-1
11	-860	-951	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaaccctttt	8.56	-1	caatcctttt	7.21	-1
11	-951	-860	NM_164546	ll.33583	odd	NaN	NaN	NaN	caatcctttt	7.21	-1	aaaccctttt	8.56	-1
12	-1808	-1871	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaatcctttt	7.12	-1	taacccattc	8.48	-1
12	-1871	-1808	NM_057311	ll.34669	nub	NaN	NaN	NaN	taacccattc	8.48	-1	aaatcctttt	7.12	-1
13	2418	2355	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caacccattt	7.49	-1	caacccattt	7.49	-1
13	2355	2418	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caacccattt	7.49	-1	caacccattt	7.49	-1

62 motifs = 95 135 0 0 thresholds = 10.183 ||9.852 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1148	1160	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaagc	11.02	-1	gcttttggccgatc	11.92	-1
1	-391	-403	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaatg	10.55	-1	attcggccaaaatg	11.07	1
1	-2915	-2903	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaacatc	10.33	-1	gatgttggccgaac	11.23	-1
1	-4239	-4251	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	gttcggccaaaggg	12.05	1
2	-60	-72	NM_079463	ll.40287	kni	NaN	NaN	NaN	tcggccagtagg	11.18	-1	gttcggccagtagg	12.16	1
4	61	49	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcggccagtagg	11.18	-1	ggtcggccagtagg	11.15	1
5	-4451	-4463	NM_079253	ll.38995	h	NaN	NaN	NaN	tcggccaggagg	11.56	-1	gctcggccaggagg	11.03	1
6	452	440	NM_078700	ll.33059	run	NaN	NaN	NaN	tcggccagcagc	11.80	-1	actcggccagcagc	11.59	1
6	-2617	-2629	NM_078700	ll.33059	run	NaN	NaN	NaN	n	NaN	NaN	aatcggccatcggc	10.11	1
8	4249	4237	NM_164966	ll.34569	salm	NaN	NaN	NaN	tcggccagcagc	11.80	-1	agtcggccagcagc	11.30	1
10	-2206	-2218	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcggccatcagg	11.43	-1	gttcggccatcagg	11.53	1

63 motifs = 196 234 0 0 thresholds = 9.196 ||8.919 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2505	2440	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctgccagatagcacagc	10.06	-1	aacagaaa	8.92	-1
2	695	637	NM_079463	ll.40287	kni	NaN	NaN	NaN	gttgcataatccggcagc	9.35	1	aaaagaaa	9.40	-1
4	-3084	-2908	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttggccacccgtggcggc	9.49	1	aacagaaa	8.92	-1
5	857	677	NM_079253	ll.38995	h	NaN	NaN	NaN	gctggcgtagctgcccac	11.33	-1	aaaagaaa	9.40	-1
5	-2055	-2139	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgcctctgccgccgac	10.09	-1	aaaagaaa	9.40	-1
5	-2055	-2155	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgcctctgccgccgac	10.09	-1	aaaagaaa	9.40	-1
5	-2079	-2139	NM_079253	ll.38995	h	NaN	NaN	NaN	tctgccgacgctgaccgc	10.68	1	aaaagaaa	9.40	-1
5	-2079	-2155	NM_079253	ll.38995	h	NaN	NaN	NaN	tctgccgacgctgaccgc	10.68	1	aaaagaaa	9.40	-1
5	-2170	-2139	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgccaacgttttccga	10.04	-1	aaaagaaa	9.40	-1
5	-2170	-2155	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgccaacgttttccga	10.04	-1	aaaagaaa	9.40	-1
6	-6	75	NM_078700	ll.33059	run	NaN	NaN	NaN	actgccaacgatcgcagc	11.54	-1	aacagaaa	8.92	-1
6	-63	75	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgtcgacagaggcggc	9.56	1	aacagaaa	8.92	-1
7	1199	1073	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctggcaaagtttccgaa	9.54	-1	aacagaaa	8.92	-1
8	1801	1941	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	aacagaaa	8.92	-1
8	1801	1931	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	tttctgtt	8.92	1
8	1801	1879	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	aaaagaaa	9.40	-1

64 motifs = 165 215 0 0 thresholds = 7.934 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2226	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	aattgcggatgggtggatggatggg	10.93	1	tttcccgggaaaatttg	13.52	1
4	-209	-348	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccatcccaatccaatccaacccac	10.40	-1	cggcccgggaaaatgcg	11.39	1
5	-329	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	cacgcacacacacacacacacactg	8.64	-1	cccattcccgcgagcca	10.49	-1
5	-553	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	caacaccaacaccaccgcgaccatc	9.90	-1	cccattcccgcgagcca	10.49	-1
5	-568	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	caacaccaacaccaccgcgaccatc	9.90	-1	cccattcccgcgagcca	10.49	-1
8	-2096	-2027	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccacccccttgtcacatccgcccac	14.08	-1	tttcccgaggacattcg	10.93	1

65 motifs = 41 141 0 0 thresholds = 9.521 ||9.669 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-330	-342	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctttcactc	9.67	-1	actcacccactc	10.75	-1
1	-350	-342	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcgctc	12.70	-1	actcacccactc	10.75	-1
1	-478	-342	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcactt	10.10	-1	actcacccactc	10.75	-1
2	-179	-209	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctcactc	11.40	-1	acgcacacatgc	10.27	-1
2	-179	-295	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctcactc	11.40	-1	actcactcactc	9.67	-1
2	-295	-209	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	acgcacacatgc	10.27	-1
2	-295	-459	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	acacacacacac	13.40	-1
2	-326	-209	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctctctc	12.50	-1	acgcacacatgc	10.27	-1
2	-326	-295	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctctctc	12.50	-1	actcactcactc	9.67	-1
2	-326	-459	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctctctc	12.50	-1	acacacacacac	13.40	-1
2	-442	-295	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	actcactcactc	9.67	-1
2	-442	-459	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	acacacacacac	13.40	-1
3	-104	-79	NM_079143	ll.38012	kr	NaN	NaN	NaN	ctctcccgctc	10.52	-1	acgcacacacgc	12.22	-1
4	1425	1230	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctctctctctc	12.50	-1	atacacacactc	11.29	-1
6	-420	-286	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctctctc	12.50	-1	aaacacacacac	9.78	-1
7	-2099	-2157	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcgctcgctg	9.52	-1	acacacacccac	9.81	-1
8	-625	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctc	10.52	-1	acacacacacac	13.40	-1
8	-625	-607	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctc	10.52	-1	actcacacacgc	11.90	-1
8	-665	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	acacacacacac	13.40	-1
8	-665	-607	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	actcacacacgc	11.90	-1
8	-966	-1102	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	actcactcactc	9.67	-1
8	-1090	-1102	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	actcactcactc	9.67	-1
8	-1090	-1286	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	attcacacacac	10.76	-1
8	-1098	-1286	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagcgaaagag	10.97	1	attcacacacac	10.76	-1
8	-1110	-1102	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgag	9.58	1	actcactcactc	9.67	-1
8	-1110	-1286	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgag	9.58	1	attcacacacac	10.76	-1
8	-1110	-1309	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgag	9.58	1	attcacacacac	10.76	-1
8	-2383	-2369	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctcgcac	9.68	-1	gcacacacacac	10.56	-1
8	-2383	-2545	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctcgcac	9.68	-1	acacacacaggc	11.01	-1
8	-2707	-2545	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctccctctc	10.32	-1	acacacacaggc	11.01	-1
8	-2707	-2588	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctccctctc	10.32	-1	acacacacacac	13.40	-1
12	303	146	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctctttctc	10.62	-1	gcacacacacac	10.56	-1
12	-48	146	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctctctctc	12.50	-1	gcacacacacac	10.56	-1
12	-48	-220	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctctctctc	12.50	-1	actcacacactc	12.00	-1
12	-159	-220	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctcgctctctt	9.81	-1	actcacacactc	12.00	-1
12	-159	-281	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctcgctctctt	9.81	-1	tcacacacacac	9.77	-1
13	305	254	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	aagagagagag	11.20	1	acgcccacactc	9.88	-1
13	-242	-297	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ctcactcactc	9.58	-1	acagacacacac	9.72	-1
13	-2106	-1949	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccctctcgctc	11.16	-1	gggtgagtgtgt	10.12	1
13	-3447	-3395	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gagagaaagag	10.77	1	gcatgtgtgtgt	10.91	1
13	-3666	-3749	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gagcgagtgag	10.88	1	gtgtgtgtgtgt	13.40	1

66 motifs = 93 257 0 0 thresholds = 10.453 ||8.154 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2281	2367	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttgtgcca	10.80	-1	aagccaaa	9.57	-1
1	2281	2255	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttgtgcca	10.80	-1	aagccaaa	9.57	-1
3	-1140	-1180	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttatggcaa	11.20	-1	aaaccaaa	8.15	-1
3	-1140	-1265	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttatggcaa	11.20	-1	aaaccaaa	8.15	-1
7	-4065	-3969	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgtgcaa	11.19	-1	aagccaaa	9.57	-1
8	-1487	-1357	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttaattgcaa	10.79	-1	aagccaaa	9.57	-1
9	-2423	-2394	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttattggcca	11.83	-1	aaggcaaa	8.25	-1
11	-2568	-2539	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttttatggcca	10.89	-1	aaaccaaa	8.15	-1
12	-610	-782	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttatttgcca	11.33	-1	aaaccaaa	8.15	-1
13	-919	-1117	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgcccataaaa	11.70	1	aaggcaaa	8.25	-1
13	-1760	-1565	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgccgagaaaa	10.54	1	aaaccaaa	8.15	-1

67 motifs = 98 121 0 0 thresholds = 8.718 ||9.671 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1203	-1254	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttccccaccccc	11.39	-1	cggcggcgat	11.15	-1
4	1705	1676	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccaccccgcgccc	8.99	-1	cggcggccat	10.87	-1
5	-2970	-3044	NM_079253	ll.38995	h	NaN	NaN	NaN	ctcccctaccccc	9.95	-1	ccgcggccat	9.99	-1
7	-3342	-3486	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttcccctccccg	10.66	-1	ccgcggcgat	10.28	-1
8	4529	4476	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccccctgccg	9.00	-1	cgccggcaat	9.74	-1
8	4507	4476	NM_164966	ll.34569	salm	NaN	NaN	NaN	tacccccttcccc	8.86	-1	cgccggcaat	9.74	-1

68 motifs = 37 87 0 0 thresholds = 9.679 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-592	-539	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttcttttcaaa	10.89	-1	gccgttttggc	10.72	-1
7	-487	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttttttgaaa	11.11	-1	gccttttgtgc	10.78	-1
8	3700	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcattttaaa	10.50	-1	gccatttggcc	10.29	-1
8	3677	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttaattgaat	9.88	1	gccatttggcc	10.29	-1
8	3667	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcaattaaaa	9.88	-1	gccatttggcc	10.29	-1
8	3566	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	attaatttcaat	10.35	-1	gccatttggcc	10.29	-1
9	3334	3164	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttcaaattaaa	10.52	1	gccgtttgggc	11.67	-1
9	3291	3164	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	attattttcaaa	10.71	-1	gccgtttgggc	11.67	-1
10	-432	-241	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttctttttaaa	10.62	-1	gccctttggcc	10.16	-1
12	-1883	-1739	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttaatttgaaa	10.52	-1	gccttttgggc	11.72	-1

69 motifs = 87 95 0 0 thresholds = 9.586 ||10.183 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-391	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	tcggccaaaatg	10.55	-1
6	-2498	-2617	NM_078700	ll.33059	run	NaN	NaN	NaN	gccttttgtac	9.59	-1	n	NaN	NaN
8	4174	4249	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccgtttggcc	10.57	-1	tcggccagcagc	11.80	-1
12	-1739	-1717	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccttttgggc	11.72	-1	tcggccagcatc	11.01	-1

70 motifs = 100 212 0 0 thresholds = 9.655 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2324	-2226	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgaaaccaatttg	9.97	1	gaaaaaacctgaagtaaaatggcaaa	10.61	1
3	-392	-265	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgaagataattcg	10.77	1	aaaaattagcacttttaggtataaaa	10.97	1
3	-4727	-4693	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgcattaaatttg	10.70	1	tttgctatatgaacagatttattttt	11.67	-1
4	-4287	-4398	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttctgctcgc	9.82	-1	tttaagattaatagtattgtattttg	10.25	-1
5	749	676	NM_079253	ll.38995	h	NaN	NaN	NaN	cgaatttatctcgc	10.66	-1	aaaaacactctgagccagaccaaaaa	10.39	1
7	-585	-641	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.06	1	tttcaaccataaatttgaaatttttc	10.15	-1
8	-2168	-2025	NM_164966	ll.34569	salm	NaN	NaN	NaN	cattttatttgcgc	10.80	-1	ttttatttcagcttattgttgttttt	12.77	-1
8	-2168	-2246	NM_164966	ll.34569	salm	NaN	NaN	NaN	cattttatttgcgc	10.80	-1	ttttcaacatcctttcctcatttttt	11.89	-1
8	-2223	-2025	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgtctttctttcgc	10.51	-1	ttttatttcagcttattgttgttttt	12.77	-1
8	-2223	-2246	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgtctttctttcgc	10.51	-1	ttttcaacatcctttcctcatttttt	11.89	-1
8	-3830	-3667	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttaccttcgc	10.19	-1	tttcagttgcgtttaatttctgtttt	8.97	-1
10	-2050	-2036	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgtttttttttcgc	11.80	-1	tttttttttcgctgaatctggttttt	11.80	-1
13	-1029	-860	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	tttattttataaaacttattattttt	11.92	-1
13	-1029	-1096	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	ttttttgccttgacattcgcattttg	9.54	-1

71 motifs = 87 261 0 0 thresholds = 9.586 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-226	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	tcactcag	8.28	1
1	-420	-266	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	ctgagtga	8.28	-1
1	-420	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	gtgagtga	7.88	-1
2	-539	-434	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccgttttggc	10.72	-1	gtgagtga	7.88	-1
4	-4465	-4311	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	ctgagtgc	7.89	-1
7	-583	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttgagtgc	8.48	-1
7	-583	-417	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttgagtga	8.87	-1
9	3164	3231	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgggc	11.67	-1	ttgagtgc	8.48	-1

72 motifs = 139 270 0 0 thresholds = 9.819 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2866	-2928	NM_169233	ll.41032	hb	NaN	NaN	NaN	aattccgccgaa	10.61	-1	aaatcctttt	7.12	-1
2	-1562	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	aattccgcgtaa	9.84	-1	caaccctttt	8.65	-1
5	-4316	-4465	NM_079253	ll.38995	h	NaN	NaN	NaN	acttccagcgaa	11.27	-1	gaaccctttc	7.30	-1
6	-2644	-2826	NM_078700	ll.33059	run	NaN	NaN	NaN	atttcccgggaa	10.83	-1	aaaagggttg	8.65	1
6	-2644	-2842	NM_078700	ll.33059	run	NaN	NaN	NaN	atttcccgggaa	10.83	-1	tgatcctttt	7.26	1
12	-1624	-1808	NM_057311	ll.34669	nub	NaN	NaN	NaN	atttccacgtaa	10.05	-1	aaatcctttt	7.12	-1

73 motifs = 231 270 0 0 thresholds = 9.716 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3417	-3481	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	caaccctttc	7.99	-1
1	-3633	-3481	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	caaccctttc	7.99	-1
1	-3633	-3698	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	caaccctttg	7.52	-1
1	-3633	-3725	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	taacccgttc	9.05	-1
1	-3633	-3800	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	taaccctttc	9.65	-1
2	-1246	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	taaccctttt	10.31	-1
2	-1246	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	taaccctttt	10.31	-1
2	-1246	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	taaccctttt	10.31	-1
2	-1246	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	caaccctttt	8.65	-1
3	-3852	-3757	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	taatccgttt	8.27	-1
4	623	745	NM_078946	ll.36039	eve	NaN	NaN	NaN	cataaaaa	9.72	-1	taacccgttt	9.71	-1
5	-3734	-3852	NM_079253	ll.38995	h	NaN	NaN	NaN	cataaaaa	9.72	-1	aaacccgttt	7.96	-1
6	-2842	-2826	NM_078700	ll.33059	run	NaN	NaN	NaN	cataaaaa	9.72	-1	aaaagggttg	8.65	1
6	-2842	-2996	NM_078700	ll.33059	run	NaN	NaN	NaN	cataaaaa	9.72	-1	taatcctttg	7.74	-1
8	-4075	-4009	NM_164966	ll.34569	salm	NaN	NaN	NaN	cataaaaa	9.72	-1	taatcctttt	8.87	-1
11	-2578	-2433	NM_164546	ll.33583	odd	NaN	NaN	NaN	cataaaaa	9.72	-1	taatcctttt	8.87	-1
12	841	646	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	taaccatttt	7.54	-1
12	-1634	-1808	NM_057311	ll.34669	nub	NaN	NaN	NaN	cataaaaa	9.72	-1	aaatcctttt	7.12	-1

74 motifs = 35 143 0 0 thresholds = 10.187 ||7.938 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2258	-2119	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttggct	10.39	-1	ttttgatttgg	10.60	-1
1	-2258	-2270	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttggct	10.39	-1	ttttggtttgt	10.79	-1
2	-520	-653	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggca	10.66	-1	gtttgattttc	8.23	-1
3	-1139	-1188	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	tttggttttgt	10.56	-1
3	-1139	-1261	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttgtttggt	8.27	-1
4	-1462	-1543	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	gtttgttttgt	10.35	-1
4	-1985	-2029	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtttatggcc	10.61	-1	ttttgttttgg	11.38	-1
5	-2207	-2124	NM_079253	ll.38995	h	NaN	NaN	NaN	gtttttggcc	10.20	-1	ttttgcttttc	9.76	-1
6	-2246	-2074	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttttggcc	11.08	-1	tttcgtttttg	9.65	-1
8	3546	3635	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtttatggca	10.19	-1	tttcgtttttg	9.65	-1
8	3546	3509	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtttatggca	10.19	-1	ttttgtttttc	10.22	-1
9	4406	4574	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gtttatggcc	10.61	-1	tttggctttgc	9.31	-1
9	2319	2282	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttggct	10.39	-1	ttttgtttttt	11.00	-1
9	2222	2282	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttgtttttt	11.00	-1
11	-2569	-2739	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggcc	11.48	-1	tttcgattttt	9.06	-1
11	-2657	-2739	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	tttcgattttt	9.06	-1
13	-826	-818	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggccataaaa	11.48	1	aaaaatcaaaa	10.23	1

75 motifs = 49 61 0 0 thresholds = 8.665 ||9.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3256	-3390	NM_169233	ll.41032	hb	NaN	NaN	NaN	tgtatctttgtgtgt	10.08	-1	cgatcggaccacag	9.84	-1
5	434	605	NM_079253	ll.38995	h	NaN	NaN	NaN	tttggctttggattt	9.35	-1	ccgctgcccaaatg	11.45	1
6	-4458	-4608	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaaaaaaaaacaaa	12.62	1	cagtcggtccgctg	10.46	-1
6	-4673	-4608	NM_078700	ll.33059	run	NaN	NaN	NaN	acaaccaaaacaaca	10.21	1	cagtcggtccgctg	10.46	-1
8	4089	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgttgctgttgcttt	9.58	-1	cagtcggccagcag	13.16	-1
10	-2053	-2207	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttacgttttttttt	10.98	-1	cgttcggccatcag	11.46	-1
13	-1265	-1312	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttcttgtttattt	10.71	-1	ccgttggccgattg	11.86	1

76 motifs = 36 100 0 0 thresholds = 9.062 ||9.655 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2508	-2324	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaattcaacattttt	10.87	-1	gcgaaaccaatttg	9.97	1
1	-3405	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaactaaatattt	10.06	1	gcgcacaaaaaacg	11.76	1
1	-3418	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaactaaatattt	10.06	1	gcgcacaaaaaacg	11.76	1
1	-4161	-4307	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaaatgatttttatt	9.57	-1	cgaattcatttcgc	11.02	-1
1	-4174	-4307	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaaatgatttttatt	9.57	-1	cgaattcatttcgc	11.02	-1
2	475	665	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaaaaaatcacaattt	11.36	1	gcgcgaaaaaaatg	10.54	1
3	-4789	-4727	NM_079143	ll.38012	kr	NaN	NaN	NaN	taatataatatatttt	10.82	-1	gcgcattaaatttg	10.70	1
3	-4802	-4727	NM_079143	ll.38012	kr	NaN	NaN	NaN	taatataatatatttt	10.82	-1	gcgcattaaatttg	10.70	1
4	-4413	-4287	NM_078946	ll.36039	eve	NaN	NaN	NaN	aatagtattgtatttt	9.94	1	caatttctgctcgc	9.82	-1
7	-642	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaatttgaaattttt	11.43	-1	gcgcacaaaaggcg	11.06	1
8	-2203	-2168	NM_164966	ll.34569	salm	NaN	NaN	NaN	taatacgtattatttt	9.56	-1	cattttatttgcgc	10.80	-1
8	-2203	-2223	NM_164966	ll.34569	salm	NaN	NaN	NaN	taatacgtattatttt	9.56	-1	cgtctttctttcgc	10.51	-1
13	-861	-1029	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	taaaacttattatttt	10.41	-1	catttttcattcgc	9.79	-1
13	-874	-1029	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	taaaacttattatttt	10.41	-1	catttttcattcgc	9.79	-1

77 motifs = 231 233 0 0 thresholds = 9.716 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3417	-3439	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	gctacctg	8.64	-1
1	-3633	-3439	NM_169233	ll.41032	hb	NaN	NaN	NaN	cataaaaa	9.72	-1	gctacctg	8.64	-1
2	743	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	tctacctg	8.68	-1
2	543	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	tctacctg	8.68	-1
2	-1246	-1302	NM_079463	ll.40287	kni	NaN	NaN	NaN	cataaaaa	9.72	-1	gctacctg	8.64	-1
3	-1130	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	tctacctg	8.68	-1
3	-1130	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	cataaaaa	9.72	-1	cctaccta	7.98	-1
4	-2391	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	cataaaaa	9.72	-1	cctaccta	7.98	-1
6	-3316	-3129	NM_078700	ll.33059	run	NaN	NaN	NaN	cataaaaa	9.72	-1	cctacctg	8.89	-1
7	-4034	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cataaaaa	9.72	-1	tctaccta	7.77	-1

78 motifs = 149 225 0 0 thresholds = 9.536 ||9.484 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-4186	-4160	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatccatccatcc	11.12	-1	cgcacagagagcgg	11.29	1
5	-819	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	cccaaccacccaacc	11.34	-1	ccgcctagcgtgcg	10.61	-1
6	-4754	-4600	NM_078700	ll.33059	run	NaN	NaN	NaN	ggggagggggatggg	9.58	1	ccgctgccgccgcg	9.63	-1
8	2781	2837	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacgcccccccccc	10.23	-1	cgcacgagaagcgg	12.12	1

79 motifs = 41 163 0 0 thresholds = 9.521 ||8.570 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-326	-520	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctctctctctc	12.50	-1	gcagccaaaacggctccgcccatg	9.63	-1
2	-442	-520	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	gcagccaaaacggctccgcccatg	9.63	-1
3	-104	-60	NM_079143	ll.38012	kr	NaN	NaN	NaN	ctctcccgctc	10.52	-1	ccggcgtgtgtgcgtacgagggtg	9.54	-1
4	1425	1346	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctctctctctc	12.50	-1	gcggagcaaccgcctgcgggcggg	9.61	1
6	-509	-695	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctc	12.70	-1	cgaacccctccgcaggagggccgc	11.10	1
6	-533	-695	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctt	11.40	-1	cgaacccctccgcaggagggccgc	11.10	1
7	-208	-199	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aagagagagag	11.20	1	gcggccatcatgcgagagagcggg	11.79	-1
7	-2099	-1959	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcgctcgctg	9.52	-1	gcggcccacctgccacgggcccac	12.43	-1
8	-625	-490	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctc	10.52	-1	cacacacgtacgcaaaccggttgc	9.12	1
8	-625	-538	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctc	10.52	-1	cacacacgtacgcaaaccggttgc	9.12	1
8	-665	-490	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	cacacacgtacgcaaaccggttgc	9.12	1
8	-665	-538	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	cacacacgtacgcaaaccggttgc	9.12	1
8	-846	-1032	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccctctctctc	10.96	-1	ggctgccaagggctcgttggcggg	8.57	1
8	-966	-1032	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	ggctgccaagggctcgttggcggg	8.57	1
8	-1090	-1032	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctttcgctc	10.97	-1	ggctgccaagggctcgttggcggg	8.57	1
8	-1098	-1032	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagcgaaagag	10.97	1	ggctgccaagggctcgttggcggg	8.57	1
8	-1110	-1032	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgag	9.58	1	ggctgccaagggctcgttggcggg	8.57	1

80 motifs = 189 220 0 0 thresholds = 8.353 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1672	-1642	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccacacagcacccgccc	10.23	-1	gcgaacgctaatcg	10.58	1
1	-3436	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	cagccagctacctgccc	8.41	-1	gcgcacaaaaaacg	10.98	1
4	-2483	-2464	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggacagtcggctcgtgg	8.35	1	cggctcgtggacgc	9.54	-1
5	-811	-800	NM_079253	ll.38995	h	NaN	NaN	NaN	ccactgcccgatcgccc	8.92	-1	cgcctagcgtgcgc	10.43	-1
5	-843	-800	NM_079253	ll.38995	h	NaN	NaN	NaN	caaccacccaaccaccc	11.81	1	cgcctagcgtgcgc	10.43	-1
6	-4754	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gggggagggggatgggg	11.46	1	gcggtcggaagccg	10.04	1
8	2780	2836	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacgcccccccccccc	8.81	-1	gcgcacgagaagcg	11.55	1
9	6755	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ccacaatccaacggccc	10.33	-1	gcgtacacaaaacg	10.40	1

81 motifs = 196 214 0 0 thresholds = 9.196 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2055	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtgggtacctaagccagc	9.89	1	ttttgccgccc	10.46	-1
4	1673	1659	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctcccagcgacggcggc	10.04	-1	attggccgctc	9.98	-1
4	-2331	-2236	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcagccctcgattcccgc	10.85	-1	attgcccgctc	9.42	-1
5	857	825	NM_079253	ll.38995	h	NaN	NaN	NaN	gctggcgtagctgcccac	11.33	-1	ttgggcggcac	9.83	-1
6	-4694	-4532	NM_078700	ll.33059	run	NaN	NaN	NaN	gccggcagcactgccagc	11.66	1	attggcggcac	9.98	-1
7	-1894	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgagtacctgggcagc	10.33	1	ttgggcggccc	9.79	-1

82 motifs = 35 268 0 0 thresholds = 10.187 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	726	736	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcc	11.08	-1	ttttatga	6.70	-1
2	726	656	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcc	11.08	-1	ttttatga	6.70	-1
2	726	550	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcc	11.08	-1	ttttatgg	6.31	-1
2	552	736	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttatga	6.70	-1
2	552	656	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttatga	6.70	-1
3	-1139	-1125	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttatgt	6.34	-1
4	-1272	-1460	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttatgg	6.31	-1
4	-1462	-1274	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttatgg	6.31	-1
4	-1985	-1909	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtttatggcc	10.61	-1	ttttatgg	6.31	-1
5	-4899	-4704	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttatgg	6.31	-1
8	3546	3479	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtttatggca	10.19	-1	ttttatgt	6.34	-1
9	2319	2220	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttggct	10.39	-1	ttttatgg	6.31	-1
10	-1982	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttatgg	6.31	-1
10	-2076	-1984	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttatgg	6.31	-1
11	-2569	-2659	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggcc	11.48	-1	ttttatgg	6.31	-1
11	-2657	-2571	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	ttttatgg	6.31	-1
11	-2657	-2856	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	ttttatga	6.70	-1
13	-826	-915	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggccataaaa	11.48	1	ccataaaa	6.31	1

83 motifs = 202 231 0 0 thresholds = 8.353 ||9.716 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1810	1715	NM_169233	ll.41032	hb	NaN	NaN	NaN	aatgcagctccaaaa	9.38	1	cataaaaa	9.72	-1
2	826	743	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttgctcagcagcatt	8.83	-1	cataaaaa	9.72	-1
2	360	543	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttgggtcgcggccgt	8.58	-1	cataaaaa	9.72	-1
4	-1348	-1453	NM_078946	ll.36039	eve	NaN	NaN	NaN	aatgcagctaattcg	9.37	1	cataaaaa	9.72	-1
4	-1498	-1453	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgatttcgctgcctt	9.51	-1	cataaaaa	9.72	-1
4	-1780	-1916	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttcgctgcgct	11.03	-1	cataaaaa	9.72	-1
5	-3044	-3107	NM_079253	ll.38995	h	NaN	NaN	NaN	tttcgccgcggccat	8.46	-1	cataaaaa	9.72	-1
8	-4060	-4075	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttatgagcggcaat	9.02	-1	cataaaaa	9.72	-1
9	-669	-485	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	accgcagcacacaaa	9.59	1	cataaaaa	9.72	-1
10	-4622	-4711	NM_080310	ll.31227	gt	NaN	NaN	NaN	atggcagctaatcaa	10.35	1	cataaaaa	9.72	-1
12	1815	1655	NM_057311	ll.34669	nub	NaN	NaN	NaN	agcgcagcgaatgcg	10.02	1	cataaaaa	9.72	-1

84 motifs = 14 258 0 0 thresholds = 6.618 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	542	403	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtttttatggccga	6.86	1	ttttttac	8.11	-1
2	-3128	-3112	NM_079463	ll.40287	kni	NaN	NaN	NaN	ccggccatcaaagg	7.19	-1	ttttttac	8.11	-1
3	-1129	-984	NM_079143	ll.38012	kr	NaN	NaN	NaN	cttgccataaaaat	7.04	-1	ttttttac	8.11	-1
3	-1129	-998	NM_079143	ll.38012	kr	NaN	NaN	NaN	cttgccataaaaat	7.04	-1	ctttttac	9.53	1
4	-630	-759	NM_078946	ll.36039	eve	NaN	NaN	NaN	tgttttatggcaga	6.85	1	ttttttac	8.11	-1
5	-4816	-4845	NM_079253	ll.38995	h	NaN	NaN	NaN	ggtgcaataaaccg	7.05	-1	ctttttac	9.53	-1
5	-4909	-4845	NM_079253	ll.38995	h	NaN	NaN	NaN	ccttttatggcaaa	7.62	1	ctttttac	9.53	-1
8	-3745	-3659	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgccccataaatct	6.72	-1	ctttttac	9.53	-1
10	-2086	-2063	NM_080310	ll.31227	gt	NaN	NaN	NaN	ggttttatggcctg	7.75	1	ttttttac	8.11	-1
10	-2086	-2193	NM_080310	ll.31227	gt	NaN	NaN	NaN	ggttttatggcctg	7.75	1	ttttttac	8.11	-1
10	-2376	-2193	NM_080310	ll.31227	gt	NaN	NaN	NaN	cagtttatggctcc	6.96	1	ttttttac	8.11	-1
11	-2659	-2773	NM_164546	ll.33583	odd	NaN	NaN	NaN	ggctttatggccga	8.37	1	ttttttac	8.11	-1
13	-345	-419	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	tgttttatggctcc	7.34	1	gtaaaaaa	8.11	1

85 motifs = 264 268 0 0 thresholds = 7.927 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3474	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatga	6.70	-1
1	-3474	-3640	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
1	-3691	-3640	NM_169233	ll.41032	hb	NaN	NaN	NaN	aacccgtt	8.11	1	ttttatgg	6.31	-1
1	-3732	-3640	NM_169233	ll.41032	hb	NaN	NaN	NaN	aacgggtt	8.11	-1	ttttatgg	6.31	-1
1	-3807	-3640	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
2	-1171	-1253	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatga	6.70	-1
2	-1171	-1318	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgc	6.31	-1
2	-1171	-1348	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
2	-1307	-1253	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatga	6.70	-1
2	-1307	-1318	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgc	6.31	-1
2	-1307	-1348	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
2	-1337	-1253	NM_079463	ll.40287	kni	NaN	NaN	NaN	aacccttt	9.05	1	ttttatga	6.70	-1
2	-1337	-1318	NM_079463	ll.40287	kni	NaN	NaN	NaN	aacccttt	9.05	1	ttttatgc	6.31	-1
2	-1337	-1348	NM_079463	ll.40287	kni	NaN	NaN	NaN	aacccttt	9.05	1	ttttatgg	6.31	-1
2	-1371	-1253	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatga	6.70	-1
2	-1371	-1318	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgc	6.31	-1
2	-1371	-1348	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
3	-1010	-1125	NM_079143	ll.38012	kr	NaN	NaN	NaN	aacggatt	7.93	-1	ttttatgt	6.34	-1
3	-1010	-1137	NM_079143	ll.38012	kr	NaN	NaN	NaN	aacggatt	7.93	-1	acataaaa	6.34	1
3	-3750	-3859	NM_079143	ll.38012	kr	NaN	NaN	NaN	aacggatt	7.93	-1	ttttatga	6.70	-1
5	-3859	-3741	NM_079253	ll.38995	h	NaN	NaN	NaN	aacgggtt	8.11	-1	ttttatgt	6.34	-1
5	-3859	-4048	NM_079253	ll.38995	h	NaN	NaN	NaN	aacgggtt	8.11	-1	ttttatgt	6.34	-1
5	-4578	-4704	NM_079253	ll.38995	h	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
5	-4600	-4704	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
5	-4646	-4704	NM_079253	ll.38995	h	NaN	NaN	NaN	aacgggtt	8.11	-1	ttttatgg	6.31	-1
5	-4912	-4901	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
6	-2835	-2849	NM_078700	ll.33059	run	NaN	NaN	NaN	aaagggtt	9.05	-1	ttttatgg	6.31	-1
6	-2989	-2849	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
6	-2989	-3071	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
8	-4016	-4068	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatga	6.70	-1
9	-3950	-4088	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aacggatt	7.93	-1	ttttatgg	6.31	-1
10	-2159	-1984	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
10	-2159	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
10	-2223	-2078	NM_080310	ll.31227	gt	NaN	NaN	NaN	aacgggtt	8.11	-1	ttttatgg	6.31	-1
11	-2440	-2571	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatgg	6.31	-1
12	-1815	-1627	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaaggatt	8.87	-1	ttttatga	6.70	-1

86 motifs = 214 254 0 0 thresholds = 9.417 ||7.784 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1908	-1814	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgccgccc	10.46	-1	cccgggaa	8.37	-1
4	-535	-339	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcccgccc	9.90	-1	cccgggaa	8.37	-1
4	-2534	-2615	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttgggccgcac	9.83	-1	cccgggaa	8.37	-1
6	-678	-790	NM_078700	ll.33059	run	NaN	NaN	NaN	tttggcggccc	10.92	-1	ctcgggaa	9.03	-1
8	-923	-758	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgcggctc	10.49	-1	ctcgggat	8.28	-1
9	1549	1646	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	attgccggctc	9.42	-1	ctcgggaa	9.03	-1

87 motifs = 141 178 0 0 thresholds = 9.669 ||8.704 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2341	2512	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacacacac	9.91	-1	gccagatagcacagcaccatcc	10.61	-1
2	-209	-60	NM_079463	ll.40287	kni	NaN	NaN	NaN	acgcacacatgc	10.27	-1	gccaaagagttcggccagtagg	8.81	-1
5	-331	-261	NM_079253	ll.38995	h	NaN	NaN	NaN	acgcacacacac	12.76	-1	cggtcgtgtggctcgcgctcgc	10.00	1
6	-172	-135	NM_078700	ll.33059	run	NaN	NaN	NaN	acgcacacaggc	10.36	-1	gccaaccacaccaccataccgc	10.34	-1
6	-286	-135	NM_078700	ll.33059	run	NaN	NaN	NaN	aaacacacacac	9.78	-1	gccaaccacaccaccataccgc	10.34	-1
8	-1102	-1145	NM_164966	ll.34569	salm	NaN	NaN	NaN	actcactcactc	9.67	-1	ctgcgctgccgagcgagatggc	10.65	1
8	-1286	-1145	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcacacacac	10.76	-1	ctgcgctgccgagcgagatggc	10.65	1
8	-1309	-1145	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcacacacac	10.76	-1	ctgcgctgccgagcgagatggc	10.65	1
8	-2369	-2333	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacacacacac	10.56	-1	gctctctgcttggcctggtggc	12.09	1
8	-2369	-2359	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacacacacac	10.56	-1	gctctctgcttggcctggtggc	12.09	1
8	-2545	-2359	NM_164966	ll.34569	salm	NaN	NaN	NaN	acacacacaggc	11.01	-1	gctctctgcttggcctggtggc	12.09	1
12	-220	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	actcacacactc	12.00	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-281	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcacacacacac	9.77	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-390	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	atacacacatac	9.78	-1	gcccacgagcgaaccacaaacg	8.71	-1
12	-441	-244	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcacacacacac	10.56	-1	gcccacgagcgaaccacaaacg	8.71	-1
13	-3749	-3879	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gtgtgtgtgtgt	13.40	1	gccatattgccctgcacctacc	8.88	-1

88 motifs = 64 220 0 0 thresholds = 7.766 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3508	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	cttttattttttt	9.53	-1	gcggccacgaaacg	10.44	1
1	3498	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaataaaag	9.53	1	gcggccacgaaacg	10.44	1
2	409	219	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttactgtttc	9.63	-1	acgatcgcgaatcg	9.17	1
4	-2411	-2464	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttttctttc	8.92	-1	cggctcgtggacgc	9.54	-1
5	-1882	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	ttctgacattttt	8.92	-1	gcgaccacaaaacg	11.08	1
6	-4580	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	cttttccgctttt	10.27	-1	gcggtcggaagccg	10.04	1
7	-462	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgactttttt	8.49	-1	gcgcacaaaaggcg	11.02	1
7	-565	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcttcttttttc	8.25	-1	gcgcacaaaaggcg	11.02	1
7	-603	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttctctctttt	11.33	-1	gcgcacaaaaggcg	11.02	1
8	2782	2836	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtttttttttttt	8.02	-1	gcgcacgagaagcg	11.55	1
8	-852	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctctctttc	8.92	-1	gcgagcgagaggcg	10.64	1
9	2990	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttcttgccctttc	8.48	-1	gcgcgcagaagtcg	9.28	1
9	2948	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cttttgctatttc	9.55	-1	gcgcgcagaagtcg	9.28	1

89 motifs = 202 220 0 0 thresholds = 8.353 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1594	-1642	NM_169233	ll.41032	hb	NaN	NaN	NaN	cggatcagcggcgct	8.64	-1	gcgaacgctaatcg	10.58	1
1	-1792	-1642	NM_169233	ll.41032	hb	NaN	NaN	NaN	atcgcagctcatcaa	10.17	1	gcgaacgctaatcg	10.58	1
2	360	219	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttgggtcgcggccgt	8.58	-1	acgatcgcgaatcg	9.17	1
6	-4639	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	aacgccgcagccgca	8.92	1	gcggtcggaagccg	10.04	1
7	-410	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaggcagcgcactca	9.97	1	gcgcacaaaaggcg	11.02	1
8	-509	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaggcagccgaacaa	9.92	1	acgtacgcaaaccg	9.72	1
8	-509	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaggcagccgaacaa	9.92	1	gcgagcgagaggcg	10.64	1
9	2958	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaggcagcaaaggca	10.06	1	gcgcgcagaagtcg	9.28	1

90 motifs = 207 215 0 0 thresholds = 7.225 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2225	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	tgggtggatggatgggt	8.16	1	tttcccgggaaaatttg	13.52	1
5	-580	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	acaccaacaccaccgcg	7.55	-1	cccattcccgcgagcca	10.49	-1
7	-1910	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccacatcccataacccc	7.97	-1	cccataaccccggggca	11.49	-1
7	-1961	-1926	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccacctgccacgggccc	12.09	-1	cccataaccccggggca	11.49	-1
8	-1023	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	tggcaggctgccaaggg	7.38	1	tggcccgagagaaagag	10.90	1
8	-1037	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	tggcaggctgccaaggg	7.38	1	tggcccgagagaaagag	10.90	1

91 motifs = 196 252 0 0 thresholds = 9.196 ||7.303 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2505	2543	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctgccagatagcacagc	10.06	-1	cgggaaaa	8.55	-1
2	695	530	NM_079463	ll.40287	kni	NaN	NaN	NaN	gttgcataatccggcagc	9.35	1	cgggaaaa	8.55	-1
2	-2532	-2372	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctgccatttccgacagc	9.84	-1	atttcccg	8.68	1
2	-2532	-2384	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctgccatttccgacagc	9.84	-1	cgggaaat	8.68	-1
4	-163	9	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctgccgcagagcctcgc	10.14	-1	cgggaaag	8.89	-1
4	-163	-337	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctgccgcagagcctcgc	10.14	-1	cgggaaaa	8.55	-1
6	-6	-114	NM_078700	ll.33059	run	NaN	NaN	NaN	actgccaacgatcgcagc	11.54	-1	cgggaaag	8.89	-1
6	-63	-114	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgtcgacagaggcggc	9.56	1	cgggaaag	8.89	-1
7	1199	1302	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctggcaaagtttccgaa	9.54	-1	agggaaat	7.43	-1
8	1801	1726	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgtgacctatggcagc	10.70	1	agggaaaa	7.30	-1
12	3269	3130	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgccgccgacgacgac	9.60	-1	agggaaag	7.65	-1

92 motifs = 35 264 0 0 thresholds = 10.187 ||7.927 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-1139	-1010	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	aacggatt	7.93	-1
4	794	738	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttggcc	11.08	-1	aacgggtt	8.11	-1
5	-4899	-4912	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttatggca	11.06	-1	aaaggatt	8.87	-1
6	-3069	-2989	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttatggcc	11.48	-1	aaaggatt	8.87	-1
9	6262	6428	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gtttttggcc	10.20	-1	aaagggtt	9.05	-1
9	-4086	-3950	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggcc	11.48	-1	aacggatt	7.93	-1
10	-1982	-2159	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggca	11.06	-1	aaaggatt	8.87	-1
10	-2076	-2159	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	aaaggatt	8.87	-1
10	-2076	-2223	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	aacgggtt	8.11	-1
11	-2569	-2440	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggcc	11.48	-1	aaaggatt	8.87	-1

93 motifs = 88 161 0 0 thresholds = 9.584 ||9.392 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1666	1521	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctcccagcga	9.70	-1	ccgctgctccgggtcctgctcc	11.26	-1
6	-13	-72	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	ggcgctagcgccgtgcaagtgg	9.57	1
6	-13	-108	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	ggcgctagcgccgtgcaagtgg	9.57	1
6	-13	-185	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccaacga	10.82	-1	gatatatacctgccccggcacc	9.49	-1
6	-4676	-4592	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gccgcagccgcagtcgcagtcg	11.60	1
6	-4676	-4636	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gccgcagccgcagtcgcagtcg	11.60	1
6	-4676	-4724	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gccgctgccgacgtcgctgccg	9.57	1
7	234	243	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccagcgc	10.43	-1	cgccgctgcccgcgctggcagc	12.01	-1
8	4309	4273	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	ggccagcagcagcagcagcacc	9.50	-1
8	4309	4261	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	ggccagcagcagcagcagcacc	9.50	-1
11	202	59	NM_164546	ll.33583	odd	NaN	NaN	NaN	cggccaacga	9.58	-1	gctcagcggcagcagcagcagc	9.74	-1
12	-4315	-4277	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	gcaggatgagcaggagcaggcg	10.45	1
12	-4315	-4457	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	ccctcgccgccgctgccgctgc	10.29	-1
12	-4315	-4472	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	ccctcgccgccgctgccgctgc	10.29	-1

94 motifs = 177 225 0 0 thresholds = 8.297 ||9.484 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-2404	-2537	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttgtttcgacaa	9.30	-1	cgcacaaagagcgg	11.20	1
4	-2436	-2537	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttgtttcgacaa	9.30	-1	cgcacaaagagcgg	11.20	1
5	-744	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	tacacagcacaaaaa	8.74	1	ccgcctagcgtgcg	10.61	-1
6	-4466	-4600	NM_078700	ll.33059	run	NaN	NaN	NaN	tttttttagggaaaa	9.95	-1	ccgctgccgccgcg	9.63	-1
7	-471	-322	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttttgaaa	8.45	-1	agcactcaaagcgg	10.14	1
7	-471	-584	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttttgaaa	8.45	-1	cgcacaaaaggcgg	10.28	1
7	-485	-322	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttttgaaa	8.45	-1	agcactcaaagcgg	10.14	1
7	-485	-584	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttttgaaa	8.45	-1	cgcacaaaaggcgg	10.28	1
8	2776	2837	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccccccaaaaaaaaa	8.43	1	cgcacgagaagcgg	12.12	1
8	-2709	-2794	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgttgaagagga	8.30	-1	gcgctgttggtgag	9.48	-1

95 motifs = 189 225 0 0 thresholds = 8.353 ||9.484 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1672	-1585	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccacacagcacccgccc	10.23	-1	gcgctgatcctgcg	10.76	-1
4	-2483	-2537	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggacagtcggctcgtgg	8.35	1	cgcacaaagagcgg	11.20	1
5	-811	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	ccactgcccgatcgccc	8.92	-1	ccgcctagcgtgcg	10.61	-1
5	-843	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	caaccacccaaccaccc	11.81	1	ccgcctagcgtgcg	10.61	-1
6	-4754	-4600	NM_078700	ll.33059	run	NaN	NaN	NaN	gggggagggggatgggg	11.46	1	ccgctgccgccgcg	9.63	-1
8	2780	2837	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacgcccccccccccc	8.81	-1	cgcacgagaagcgg	12.12	1

96 motifs = 100 197 0 0 thresholds = 9.655 ||8.970 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1163	1109	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcgcaaataattcg	11.78	1	tcatggcagcc	9.29	-1
5	749	922	NM_079253	ll.38995	h	NaN	NaN	NaN	cgaatttatctcgc	10.66	-1	caattgcagcc	9.99	-1
5	749	831	NM_079253	ll.38995	h	NaN	NaN	NaN	cgaatttatctcgc	10.66	-1	tgagtgccgcc	9.64	-1
7	-404	-222	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	tgatggccgcc	9.97	-1
13	-1029	-1163	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	cttttgccgcc	9.13	-1

97 motifs = 87 204 0 0 thresholds = 9.586 ||7.942 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-435	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	aaaaaacggcaaag	9.84	1
2	-1578	-1570	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttttgactttttta	8.50	-1
2	-1578	-1592	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	ttttgtgcgttttt	9.86	1
2	-1578	-1713	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	tttttttttttttt	9.32	-1
4	-4465	-4550	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	agaaataatcaaaa	8.23	1
5	-961	-780	NM_079253	ll.38995	h	NaN	NaN	NaN	gcccttttggc	10.32	-1	ttgtgatcttgttt	9.34	-1
7	-583	-463	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	aaaaaaagtcaaat	9.46	1
8	3654	3810	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccatttggcc	10.29	-1	atatcttttttttt	8.21	-1
9	-887	-1079	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgtgc	10.72	-1	ttgtgcaagttttt	8.49	-1

98 motifs = 95 257 0 0 thresholds = 10.183 ||8.154 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4239	-4412	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	aaaccaaa	8.15	-1
1	-4239	-4423	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	tttggttt	8.15	1
2	-60	-76	NM_079463	ll.40287	kni	NaN	NaN	NaN	tcggccagtagg	11.18	-1	aagccaaa	9.57	-1
9	4398	4583	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tcggccataaac	10.23	-1	aagccaaa	9.57	-1
10	-2206	-2015	NM_080310	ll.31227	gt	NaN	NaN	NaN	tcggccatcagg	11.43	-1	aagccaaa	9.57	-1
11	-2657	-2539	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	aaaccaaa	8.15	-1

99 motifs = 64 100 0 0 thresholds = 7.766 ||9.655 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2263	-2324	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttggctgtttt	9.90	-1	gcgaaaccaatttg	9.97	1
1	-2504	-2324	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttttttttc	9.64	-1	gcgaaaccaatttg	9.97	1
2	774	665	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttcccagtttc	10.06	-1	gcgcgaaaaaaatg	10.54	1
2	513	665	NM_079463	ll.40287	kni	NaN	NaN	NaN	attttctattttt	8.49	-1	gcgcgaaaaaaatg	10.54	1
4	983	1163	NM_078946	ll.36039	eve	NaN	NaN	NaN	attttccattttc	8.97	-1	gcgcaaataattcg	11.78	1
5	669	749	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttcttttttc	9.74	-1	cgaatttatctcgc	10.66	-1
5	660	749	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaaaaagaaaaa	9.74	1	cgaatttatctcgc	10.66	-1
7	-462	-404	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgactttttt	8.49	-1	gcgcactcaaaatg	9.82	1
7	-462	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgactttttt	8.49	-1	gcgcacaaaaggcg	11.06	1
7	-565	-404	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcttcttttttc	8.25	-1	gcgcactcaaaatg	9.82	1
7	-565	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcttcttttttc	8.25	-1	gcgcacaaaaggcg	11.06	1
7	-603	-404	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttctctctttt	11.33	-1	gcgcactcaaaatg	9.82	1
7	-603	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttctctctttt	11.33	-1	gcgcacaaaaggcg	11.06	1
8	2782	2838	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtttttttttttt	8.02	-1	cgatttagttgcgc	11.20	-1
8	-2248	-2168	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctttcctcatttt	8.84	-1	cattttatttgcgc	10.80	-1
8	-2248	-2223	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctttcctcatttt	8.84	-1	cgtctttctttcgc	10.51	-1
8	-3982	-3830	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttccccctttt	10.83	-1	cgatttaccttcgc	10.19	-1
9	2990	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttcttgccctttc	8.48	-1	gcgcgcagaagtcg	10.26	1
9	2948	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cttttgctatttc	9.55	-1	gcgcgcagaagtcg	10.26	1
13	-856	-1029	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	aaaagaaagaaaa	9.92	1	catttttcattcgc	9.79	-1
13	-1168	-1029	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	tttttgccttttg	8.09	-1	catttttcattcgc	9.79	-1

100 motifs = 100 230 0 0 thresholds = 9.655 ||8.445 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3466	-3569	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacaaaaaacg	11.76	1	aaagagag	8.68	-1
3	-4727	-4602	NM_079143	ll.38012	kr	NaN	NaN	NaN	gcgcattaaatttg	10.70	1	aaagagag	8.68	-1
7	-404	-596	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	aaagagag	8.68	-1
7	-585	-596	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.06	1	aaagagag	8.68	-1
8	-2168	-2006	NM_164966	ll.34569	salm	NaN	NaN	NaN	cattttatttgcgc	10.80	-1	aaagagag	8.68	-1
12	-201	-55	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcgcataaaatgtg	10.49	1	agagagag	9.60	-1

101 motifs = 220 234 0 0 thresholds = 8.923 ||8.919 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3466	-3628	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacaaaaaacg	10.98	1	aaaagaaa	9.40	-1
4	-2464	-2555	NM_078946	ll.36039	eve	NaN	NaN	NaN	cggctcgtggacgc	9.54	-1	aaaagaaa	9.40	-1
6	-4734	-4927	NM_078700	ll.33059	run	NaN	NaN	NaN	gcggtcggaagccg	10.04	1	aaaagaaa	9.40	-1
7	-585	-602	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.02	1	aacagaaa	8.92	-1
8	-3606	-3668	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagaccgcaaagcg	10.55	1	aaaagaaa	9.40	-1
8	-3606	-3675	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagaccgcaaagcg	10.55	1	tttctttt	9.40	1
9	6599	6578	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gcgtacacaaaacg	10.40	1	aaaagaaa	9.40	-1

102 motifs = 35 233 0 0 thresholds = 10.187 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	726	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcc	11.08	-1	tctacctg	8.68	-1
2	552	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttatggcc	11.48	-1	tctacctg	8.68	-1
3	-1139	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	tctacctg	8.68	-1
3	-1139	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	cctaccta	7.98	-1
6	-3069	-3129	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttatggcc	11.48	-1	cctacctg	8.89	-1
7	791	667	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatggca	11.06	-1	tctacctg	8.68	-1
10	-2076	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	tctacctg	8.68	-1

103 motifs = 61 101 0 0 thresholds = 9.840 ||8.962 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3346	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	ttttttgcgacgttttt	10.39	-1
5	605	410	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	aataagactcgaaaaaa	9.59	1
6	-4608	-4458	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	aaaaaaaaaaaacaaaa	10.03	1
10	-2207	-2054	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	tgttttttacgtttttt	9.60	-1
13	-1312	-1262	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccgttggccgattg	11.86	1	tttcttgtttatttttt	9.53	-1

104 motifs = 233 270 0 0 thresholds = 7.728 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1444	-1417	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctacctg	8.64	-1	taatcctttc	8.21	-1
1	-3439	-3481	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctacctg	8.64	-1	caaccctttc	7.99	-1
2	-1302	-1178	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	taaccctttt	10.31	-1
2	-1302	-1248	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	taactctttt	8.30	-1
2	-1302	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	taaccctttt	10.31	-1
2	-1302	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	taaccctttt	10.31	-1
2	-1302	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	caaccctttt	8.65	-1
5	-4620	-4465	NM_079253	ll.38995	h	NaN	NaN	NaN	cctacctg	8.89	-1	gaaccctttc	7.30	-1
5	-4620	-4571	NM_079253	ll.38995	h	NaN	NaN	NaN	cctacctg	8.89	-1	taatcctttc	8.21	-1
5	-4620	-4593	NM_079253	ll.38995	h	NaN	NaN	NaN	cctacctg	8.89	-1	taatcctttc	8.21	-1
6	-3129	-2996	NM_078700	ll.33059	run	NaN	NaN	NaN	cctacctg	8.89	-1	taatcctttg	7.74	-1
8	613	450	NM_164966	ll.34569	salm	NaN	NaN	NaN	cctaccta	7.98	-1	aaacccattt	7.39	-1
9	-1480	-1421	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gctaccta	7.73	-1	tgatcctttt	7.26	-1
10	-224	-252	NM_080310	ll.31227	gt	NaN	NaN	NaN	cctacctg	8.89	-1	tcaccccttt	7.63	-1
10	-224	-325	NM_080310	ll.31227	gt	NaN	NaN	NaN	cctacctg	8.89	-1	aaaccctttc	7.90	-1
10	-2208	-2216	NM_080310	ll.31227	gt	NaN	NaN	NaN	tctacctg	8.68	-1	caacccgttc	7.40	-1

105 motifs = 52 241 0 0 thresholds = 9.481 ||8.467 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3739	-3805	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaagtgcaatggagtttt	9.48	-1	cgaaaggg	9.07	-1
1	-3924	-3805	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaaagtgctggaaattttt	9.96	-1	cgaaaggg	9.07	-1
2	-700	-557	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaatcttgagaatcagtttg	9.61	-1	n	NaN	NaN
3	-2572	-2465	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaaataatgtttgatatttt	12.79	1	cgaaaggg	9.07	-1
3	-2594	-2465	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaaataatgtttgatatttt	12.79	1	cgaaaggg	9.07	-1
7	-4852	-4965	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaatgtttctataaatttt	11.67	-1	n	NaN	NaN
8	-3046	-2887	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaaattattattaataatta	12.50	1	cgaaaggg	9.07	-1
9	-4309	-4134	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	caaacaatttgtcatttttt	12.35	1	ggaaaggg	9.07	-1
10	-447	-330	NM_080310	ll.31227	gt	NaN	NaN	NaN	taaagttcgaaaactctttg	9.97	-1	cgaaaggg	9.07	-1
10	-447	-351	NM_080310	ll.31227	gt	NaN	NaN	NaN	taaagttcgaaaactctttg	9.97	-1	ggaaaggg	9.07	-1
11	-2133	-2185	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaaagttcgccgactgtttg	9.58	-1	cgaaaggg	9.07	-1
12	-2129	-2195	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaatagttttgatatttttt	11.34	-1	cgaaaggg	9.07	-1

106 motifs = 64 205 0 0 thresholds = 7.766 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2676	-2708	NM_169233	ll.41032	hb	NaN	NaN	NaN	gtttttttttttt	8.02	-1	tagcagagatttgc	9.20	1
2	409	237	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttactgtttc	9.63	-1	gcgaatcgctgcaa	10.53	-1
4	-340	-175	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgcattttc	10.14	-1	ccgcagagcctcgc	9.17	1
4	-340	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgcattttc	10.14	-1	cggcagggattcgc	10.02	1
4	-541	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcgccgtttt	10.42	-1	cggcagggattcgc	10.02	1
4	-574	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcgccgtttt	10.42	-1	cggcagggattcgc	10.02	1
5	-439	-513	NM_079253	ll.38995	h	NaN	NaN	NaN	ttcttcctttttg	7.93	-1	gcagagcccagcag	9.94	-1
7	-1994	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gttttacattttt	8.49	-1	ccgctgtgagtggc	10.37	1
8	1964	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtctttctttttt	8.37	-1	tcgcagcgatttgc	10.53	1
8	1950	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtctttctttttt	8.37	-1	tcgcagcgatttgc	10.53	1
8	1888	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttcttttt	9.97	-1	tcgcagcgatttgc	10.53	1
10	-4832	-4978	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttttgtcctttt	9.05	-1	gcaaatcgctgcaa	10.44	-1

107 motifs = 64 87 0 0 thresholds = 7.766 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-381	-420	NM_169233	ll.41032	hb	NaN	NaN	NaN	cttttgcattttc	10.07	-1	gcctttttggc	10.78	-1
1	-434	-420	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctttgccgttttt	9.93	-1	gcctttttggc	10.78	-1
1	-476	-420	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcactttt	9.50	-1	gcctttttggc	10.78	-1
2	-1562	-1578	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgactttttt	10.32	-1	gccttttgtgc	10.78	-1
2	-1593	-1578	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgactttttt	10.32	-1	gccttttgtgc	10.78	-1
2	-1711	-1578	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttttttttt	10.56	-1	gccttttgtgc	10.78	-1
5	-1098	-961	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttcacgttttt	10.79	-1	gcccttttggc	10.32	-1
7	-462	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgactttttt	8.49	-1	gccttttgtgc	10.78	-1
7	-565	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcttcttttttc	8.25	-1	gccttttgtgc	10.78	-1
7	-603	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttctctctttt	11.33	-1	gccttttgtgc	10.78	-1
8	4364	4174	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctccttttc	9.03	-1	gccgtttggcc	10.57	-1
8	4336	4174	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttgctttc	8.27	-1	gccgtttggcc	10.57	-1
9	3251	3164	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttccctatttc	10.36	-1	gccgtttgggc	11.67	-1
9	2990	3164	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttcttgccctttc	8.48	-1	gccgtttgggc	11.67	-1
9	-998	-887	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cttttctactttt	9.17	-1	gccgtttgtgc	10.72	-1
10	-379	-241	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttcgcagtttt	10.68	-1	gccctttggcc	10.16	-1

108 motifs = 147 194 0 0 thresholds = 9.707 ||9.307 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2192	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctgcatggtccccatgcccccac	11.47	-1	ttgcctggctgcac	10.63	-1
1	2052	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	gggggcggtgttggggtgggggg	12.37	1	ttgcctggctgcac	10.63	-1
4	1346	1178	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccgcccgtcccgctcgctcctgc	12.79	-1	tggcaggcgatcga	9.67	1
5	1293	1247	NM_079253	ll.38995	h	NaN	NaN	NaN	ccccaacctacgccgcctcctcc	11.96	-1	ttggccgccagcca	11.00	-1
5	1281	1247	NM_079253	ll.38995	h	NaN	NaN	NaN	ccccaacctacgccgcctcctcc	11.96	-1	ttggccgccagcca	11.00	-1
6	-2345	-2256	NM_078700	ll.33059	run	NaN	NaN	NaN	ctccccattccttctcctcctcc	15.14	-1	ttggtgggccgcaa	10.30	-1
8	-1098	-1037	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgagcgaaagagggcg	11.23	1	tggcaggctgccaa	10.68	1
8	-1098	-1143	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagtgagtgagcgaaagagggcg	11.23	1	gcgctgccgagcga	9.63	1

109 motifs = 30 47 0 0 thresholds = 7.023 ||10.161 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3645	-3700	NM_169233	ll.41032	hb	NaN	NaN	NaN	aggctcaaagg	7.27	-1	aaccctttggc	10.77	-1
1	-3645	-3798	NM_169233	ll.41032	hb	NaN	NaN	NaN	aggctcaaagg	7.27	-1	aaccctttcgc	10.95	-1
1	-3652	-3700	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctttgtcctt	7.12	-1	aaccctttggc	10.77	-1
1	-3652	-3798	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctttgtcctt	7.12	-1	aaccctttcgc	10.95	-1
5	-4261	-4319	NM_079253	ll.38995	h	NaN	NaN	NaN	aataccaaagg	7.11	-1	aatcctttcgc	11.46	-1
8	-3891	-4007	NM_164966	ll.34569	salm	NaN	NaN	NaN	aagatcaccgg	7.22	-1	aatccttttgc	11.52	-1
10	-1071	-1124	NM_080310	ll.31227	gt	NaN	NaN	NaN	aacatccaagg	7.20	-1	aatccttttgc	11.52	-1

110 motifs = 48 197 0 0 thresholds = 7.864 ||8.970 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1274	-1231	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttggctttg	8.51	-1	taagtgccgcc	9.72	-1
4	981	1109	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttccattt	11.07	-1	tcatggcagcc	9.29	-1
5	-965	-979	NM_079253	ll.38995	h	NaN	NaN	NaN	tttggctttt	9.76	-1	cgatagccgcc	8.98	-1
5	-2125	-2091	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	caagtgccgcc	9.93	-1
6	-266	-233	NM_078700	ll.33059	run	NaN	NaN	NaN	tttcccattt	10.20	-1	ccattgccgcc	10.96	-1
6	-274	-233	NM_078700	ll.33059	run	NaN	NaN	NaN	aaatgggaaa	10.20	1	ccattgccgcc	10.96	-1
6	-371	-233	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcctttt	10.80	-1	ccattgccgcc	10.96	-1
6	-394	-233	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcctttt	10.80	-1	ccattgccgcc	10.96	-1
7	-1996	-2171	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttacattt	8.38	-1	tctttgccgcc	9.43	-1
8	1962	1818	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttacattt	8.38	-1	ctatggcagcc	8.99	-1
8	1802	1818	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttccccttt	8.56	-1	ctatggcagcc	8.99	-1
8	1648	1818	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgctttg	8.99	-1	ctatggcagcc	8.99	-1
13	-1169	-1163	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttgccttt	8.88	-1	cttttgccgcc	9.13	-1

111 motifs = 61 85 0 0 thresholds = 9.840 ||9.914 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3420	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	aaaaaactaaatatttt	13.09	1
6	-4608	-4456	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	aaaaaaaacaaaacatt	11.87	1
9	-4182	-4292	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	aacaatttgtcattttt	10.85	-1
10	-2207	-2400	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	aacccttttttttttaa	10.39	-1

112 motifs = 73 121 0 0 thresholds = 9.213 ||9.671 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1197	-1254	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccccaccccctctgcc	10.91	-1	cggcggcgat	11.15	-1
5	-2965	-3044	NM_079253	ll.38995	h	NaN	NaN	NaN	cccctacccccaccaa	10.71	-1	ccgcggccat	9.99	-1
7	-3348	-3486	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgatccggggagggg	11.01	1	ccgcggcgat	10.28	-1
8	4501	4476	NM_164966	ll.34569	salm	NaN	NaN	NaN	acgcggggggaagggg	10.41	1	cgccggcaat	9.74	-1

113 motifs = 184 214 0 0 thresholds = 7.532 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1110	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	atttttgcca	8.58	-1	tttgcccgctc	10.40	-1
2	-2063	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttaggcca	8.11	-1	ttttgccgccc	10.46	-1
3	227	284	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttagaca	8.08	-1	ttttcccgcac	9.93	-1
4	-2404	-2236	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttctgggcca	7.53	-1	attgcccgctc	9.42	-1
4	-2404	-2534	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttctgggcca	7.53	-1	ttgggccgcac	9.83	-1
4	-2601	-2534	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttgggcca	10.00	-1	ttgggccgcac	9.83	-1
5	985	825	NM_079253	ll.38995	h	NaN	NaN	NaN	tttctggcca	8.00	-1	ttgggcggcac	9.83	-1
5	958	825	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttggcca	11.20	-1	ttgggcggcac	9.83	-1
5	634	825	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttagcca	9.79	-1	ttgggcggcac	9.83	-1
6	-602	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	tttttcgcca	8.50	-1	tttggcggccc	10.92	-1
8	-228	-284	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttggcca	11.20	-1	ttttgcggcac	10.49	-1
8	-321	-284	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttggcga	8.68	-1	ttttgcggcac	10.49	-1

114 motifs = 163 187 0 0 thresholds = 8.570 ||9.141 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-60	-8	NM_079143	ll.38012	kr	NaN	NaN	NaN	ccggcgtgtgtgcgtacgagggtg	9.54	-1	ctcacgcagcg	9.79	-1
5	-209	-230	NM_079253	ll.38995	h	NaN	NaN	NaN	gcggcgatttagcctacgaacctg	11.13	-1	gtctcgcagcg	9.52	-1
6	-2321	-2513	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgccacctcggaaaactcgcggg	10.24	1	ccttcgcagcg	9.42	-1
6	-2362	-2513	NM_078700	ll.33059	run	NaN	NaN	NaN	cctaccagaatggccatgctcccc	9.21	-1	ccttcgcagcg	9.42	-1
7	217	55	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgccgctctgccgccgtttctg	12.79	-1	n	NaN	NaN
7	-1959	-1905	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacctgccacgggcccac	12.43	-1	cactcacagcg	9.79	-1
8	-490	-398	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacacgtacgcaaaccggttgc	9.12	1	cgttcgcagcg	10.67	-1
8	-538	-398	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacacgtacgcaaaccggttgc	9.12	1	cgttcgcagcg	10.67	-1

115 motifs = 100 262 0 0 thresholds = 9.655 ||8.234 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2324	-2361	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgaaaccaatttg	9.97	1	gttggcta	9.21	-1
4	-4287	-4201	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttctgctcgc	9.82	-1	gatggcta	8.23	-1
5	749	630	NM_079253	ll.38995	h	NaN	NaN	NaN	cgaatttatctcgc	10.66	-1	gatggcta	8.23	-1
8	2838	2869	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttagttgcgc	11.20	-1	gttggcta	9.21	-1
13	-1029	-1141	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	gttggcta	9.21	-1

116 motifs = 146 233 0 0 thresholds = 8.014 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2506	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttttttc	8.68	-1	gctaccta	7.73	-1
1	-2675	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttttttg	11.20	-1	gctaccta	7.73	-1
2	519	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttgtttg	10.32	-1	tctacctg	8.68	-1
2	-1279	-1302	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttctttttgg	9.63	-1	gctacctg	8.64	-1
3	-1263	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	cttttgtttg	9.77	-1	cctaccta	7.98	-1
3	-1368	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgttttg	8.02	-1	cctaccta	7.98	-1
3	-3588	-3430	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttttttc	8.68	-1	tctacctg	8.68	-1
3	-3588	-3480	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttttttc	8.68	-1	tctacctg	8.68	-1
4	-2030	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttgttttg	8.02	-1	cctaccta	7.98	-1
4	-2211	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttttttc	8.68	-1	cctaccta	7.98	-1
6	-3263	-3129	NM_078700	ll.33059	run	NaN	NaN	NaN	ctcttttttg	9.95	-1	cctacctg	8.89	-1
8	660	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttttag	8.23	-1	cctaccta	7.98	-1
10	-2052	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttttttttc	8.68	-1	tctacctg	8.68	-1
12	3791	3969	NM_057311	ll.34669	nub	NaN	NaN	NaN	tgtttgttgg	8.38	-1	gctaccta	7.73	-1
12	3791	3747	NM_057311	ll.34669	nub	NaN	NaN	NaN	tgtttgttgg	8.38	-1	tctaccta	7.77	-1

117 motifs = 72 238 0 0 thresholds = 9.948 ||7.759 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3459	-3268	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaacggcagcca	11.09	1	gtgtcttt	8.13	1
8	2028	2138	NM_164966	ll.34569	salm	NaN	NaN	NaN	tcgcagcgatttgc	10.25	-1	aaaggtac	7.85	-1
9	-673	-490	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gaaaaccgcagcac	10.78	1	aaagatac	9.25	-1
10	-3453	-3356	NM_080310	ll.31227	gt	NaN	NaN	NaN	gagcagccttttgc	10.20	-1	aaagacac	8.13	-1
11	-2974	-2876	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaaaagagcagacc	10.61	1	aaagacac	8.13	-1

118 motifs = 73 240 0 0 thresholds = 9.213 ||7.209 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2202	2339	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccccatgcccccaccc	11.48	-1	gttagtgt	7.37	-1
4	-4309	-4431	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccccaccctgcgcac	11.23	-1	gttactta	7.80	-1
4	-4309	-4440	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccccaccctgcgcac	11.23	-1	taagtaac	7.80	1
5	-2965	-2774	NM_079253	ll.38995	h	NaN	NaN	NaN	cccctacccccaccaa	10.71	-1	gttagtat	7.46	-1
8	-2582	-2556	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtgaatggggttgggg	10.24	1	gttagtgt	7.37	-1
10	-782	-820	NM_080310	ll.31227	gt	NaN	NaN	NaN	ggtttttgggtaaggg	9.78	1	gttactta	7.80	-1
12	4173	4058	NM_057311	ll.34669	nub	NaN	NaN	NaN	ccccaacccagaaccc	11.33	-1	gttacttt	8.13	-1

119 motifs = 185 197 0 0 thresholds = 8.374 ||8.970 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1249	1109	NM_078946	ll.36039	eve	NaN	NaN	NaN	tacacacactc	9.01	-1	tcatggcagcc	9.29	-1
5	810	922	NM_079253	ll.38995	h	NaN	NaN	NaN	tacacacacgc	9.51	-1	caattgcagcc	9.99	-1
5	810	831	NM_079253	ll.38995	h	NaN	NaN	NaN	tacacacacgc	9.51	-1	tgagtgccgcc	9.64	-1
6	-286	-233	NM_078700	ll.33059	run	NaN	NaN	NaN	caaacacacac	11.02	-1	ccattgccgcc	10.96	-1
7	-2157	-2171	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cccacacacac	9.32	-1	tctttgccgcc	9.43	-1
8	1871	1818	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacactcgc	9.90	-1	ctatggcagcc	8.99	-1
13	-1251	-1163	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gtgtgtgcgtg	10.45	1	cttttgccgcc	9.13	-1

120 motifs = 220 261 0 0 thresholds = 8.923 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3350	3412	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcggccacgaaacg	10.44	1	ttgagtga	8.87	-1
1	-145	-226	NM_169233	ll.41032	hb	NaN	NaN	NaN	cggctctcgtgcgc	11.01	-1	tcactcag	8.28	1
1	-145	-266	NM_169233	ll.41032	hb	NaN	NaN	NaN	cggctctcgtgcgc	11.01	-1	ctgagtga	8.28	-1
1	-145	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	cggctctcgtgcgc	11.01	-1	gtgagtga	7.88	-1
2	219	122	NM_079463	ll.40287	kni	NaN	NaN	NaN	acgatcgcgaatcg	9.17	1	ctgagtga	8.28	-1
6	-4734	-4838	NM_078700	ll.33059	run	NaN	NaN	NaN	gcggtcggaagccg	10.04	1	ttgagtga	8.87	-1
7	-585	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.02	1	ttgagtgc	8.48	-1
7	-585	-417	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.02	1	ttgagtga	8.87	-1
8	-533	-342	NM_164966	ll.34569	salm	NaN	NaN	NaN	acgtacgcaaaccg	9.72	1	ctgagtgc	7.89	-1
8	-533	-571	NM_164966	ll.34569	salm	NaN	NaN	NaN	acgtacgcaaaccg	9.72	1	gtgagtga	7.88	-1
8	-533	-595	NM_164966	ll.34569	salm	NaN	NaN	NaN	acgtacgcaaaccg	9.72	1	gtgagtga	7.88	-1
8	-663	-571	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcgagcgagaggcg	10.64	1	gtgagtga	7.88	-1
8	-663	-595	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcgagcgagaggcg	10.64	1	gtgagtga	7.88	-1
8	-3606	-3761	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagaccgcaaagcg	10.55	1	ctgagtgc	7.89	-1

121 motifs = 61 67 0 0 thresholds = 9.840 ||8.587 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3405	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	taaaaaactaaatatttt	10.52	-1
6	-4608	-4456	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	aaaaaaaacaaaacattt	10.72	1
9	-4182	-4293	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	caaacaatttgtcatttt	9.16	-1
10	-2207	-2271	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	aaaactttggatgttttt	9.84	-1
13	-1312	-1440	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccgttggccgattg	11.86	1	aaaatgactggaatatat	8.77	1
13	-1312	-1470	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccgttggccgattg	11.86	1	aaaatgactggaatatat	8.77	1

122 motifs = 88 117 0 0 thresholds = 9.584 ||9.905 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
6	-4676	-4600	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ccgctgccgccgcg	10.72	-1
6	-4676	-4711	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	ccgctgccgacgtc	12.68	-1
6	-4676	-4767	NM_078700	ll.33059	run	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gacgtcgccagcgg	11.15	1
7	234	213	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccagcgc	10.43	-1	gctctgccgccgtt	10.44	-1
8	4309	4427	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	agcaacagcagcag	10.32	1
8	4309	4260	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	gccagcagcagcag	11.55	1
8	4309	4245	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctgccagcga	11.43	-1	ctgctgctgctggc	11.55	-1
11	202	46	NM_164546	ll.33583	odd	NaN	NaN	NaN	cggccaacga	9.58	-1	ctgctgctgccgct	11.74	-1
12	-4315	-4456	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttgccaacga	9.63	-1	ccgctgccgctgct	11.86	-1

123 motifs = 160 186 0 0 thresholds = 9.469 ||8.684 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2194	2142	NM_169233	ll.41032	hb	NaN	NaN	NaN	cccatgcccccaccc	10.53	-1	cctggctgcactcgtt	11.47	-1
1	2064	2142	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggggcggtgttgggg	10.71	1	cctggctgcactcgtt	11.47	-1
1	2052	2142	NM_169233	ll.41032	hb	NaN	NaN	NaN	gggtggggggggagg	9.48	1	cctggctgcactcgtt	11.47	-1
4	-1846	-1776	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggttcgcggaacggg	10.91	1	tttcgctgcgctagtt	10.97	-1
4	-1894	-1776	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggttcgcggaacggg	10.91	1	tttcgctgcgctagtt	10.97	-1
5	-823	-968	NM_079253	ll.38995	h	NaN	NaN	NaN	cccgatcgcccaacc	11.27	-1	gttggcggctatcgat	11.01	-1
5	-831	-968	NM_079253	ll.38995	h	NaN	NaN	NaN	ggttgggtggttggg	11.82	-1	gttggcggctatcgat	11.01	-1
5	-839	-968	NM_079253	ll.38995	h	NaN	NaN	NaN	ggttgggtggttggg	11.82	-1	gttggcggctatcgat	11.01	-1
6	1292	1256	NM_078700	ll.33059	run	NaN	NaN	NaN	ccccaccatcccccc	10.56	-1	atccattgccgccaac	9.96	1
8	-1022	-928	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctcgttggcgggg	10.23	1	aaggtgagccgcaaaa	8.76	1
8	-1022	-1038	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctcgttggcgggg	10.23	1	atggcaggctgccaag	9.87	1

124 motifs = 61 143 0 0 thresholds = 9.840 ||7.938 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3194	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	gtttgttttgg	10.17	-1
5	605	439	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	ttttgtttttg	10.82	-1
5	605	432	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	caaaaacaaaa	10.82	1
5	605	426	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	tttggattttt	9.23	-1
5	-858	-966	NM_079253	ll.38995	h	NaN	NaN	NaN	ccactgcccgatcg	10.48	1	tttggcttttg	9.37	-1
6	-4608	-4454	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	ttttgtttttt	11.00	-1
8	4248	4134	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	gtttgcttttt	9.34	-1
13	-1312	-1116	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccgttggccgattg	11.86	1	gttcgtttttt	8.62	-1

125 motifs = 48 205 0 0 thresholds = 7.864 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2874	2981	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttactttt	8.11	-1	gcagctcgctgcta	10.55	-1
2	278	237	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgctttt	10.25	-1	gcgaatcgctgcaa	10.53	-1
4	-338	-175	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcgcattt	9.65	-1	ccgcagagcctcgc	9.17	1
4	-338	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcgcattt	9.65	-1	cggcagggattcgc	10.02	1
4	-543	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgcctttt	10.31	-1	cggcagggattcgc	10.02	1
7	-1996	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttacattt	8.38	-1	ccgctgtgagtggc	10.37	1
8	1962	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttacattt	8.38	-1	tcgcagcgatttgc	10.53	1
10	-4839	-4978	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgccattg	9.33	-1	gcaaatcgctgcaa	10.44	-1

126 motifs = 47 208 0 0 thresholds = 10.161 ||8.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-375	-344	NM_169233	ll.41032	hb	NaN	NaN	NaN	tatccttttgc	10.91	-1	cccactctctcgc	10.45	-1
5	-4319	-4351	NM_079253	ll.38995	h	NaN	NaN	NaN	aatcctttcgc	11.46	-1	cccacccgctccc	11.75	-1
5	-4463	-4351	NM_079253	ll.38995	h	NaN	NaN	NaN	aaccctttcgc	10.95	-1	cccacccgctccc	11.75	-1
5	-4463	-4551	NM_079253	ll.38995	h	NaN	NaN	NaN	aaccctttcgc	10.95	-1	ctcgccccctcca	9.53	-1
6	1218	1291	NM_078700	ll.33059	run	NaN	NaN	NaN	tatccttttgc	10.91	-1	cccaccatccccc	9.31	-1
12	-4364	-4472	NM_057311	ll.34669	nub	NaN	NaN	NaN	tatcctttggc	10.67	-1	cactccccctcgc	9.16	-1

127 motifs = 173 203 0 0 thresholds = 8.143 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2208	2046	NM_169233	ll.41032	hb	NaN	NaN	NaN	cccctgcccccttggcc	9.67	-1	aaaaagggggcggtg	10.90	1
2	-2535	-2483	NM_079463	ll.40287	kni	NaN	NaN	NaN	tagctgccatttccgac	9.52	-1	aaaaagtcagcgcag	10.54	1
4	-258	-105	NM_078946	ll.36039	eve	NaN	NaN	NaN	cttccgccggcggacac	8.84	-1	caaaggccggcggag	12.05	1
6	-19	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	gtcgacagaggcggcga	10.37	1	caaacgccggcagag	11.50	1
6	-60	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	gtcgacagaggcggcga	10.37	1	caaacgccggcagag	11.50	1
6	-184	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	tacctgccccggcaccc	9.78	-1	caaacgccggcagag	11.50	1
6	-2527	-2495	NM_078700	ll.33059	run	NaN	NaN	NaN	gaggtccttcgcagcga	8.40	1	caaaaggcagcgctg	10.84	1
6	-4597	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgccgcgctg	8.70	-1	cactgctgccttttg	12.08	-1
6	-4708	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgacgtcgct	8.26	-1	cactgctgccttttg	12.08	-1
7	240	215	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccgccgtttctgtc	9.14	-1	ctctgccgccgtttc	10.36	-1
8	4364	4519	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagctgcgactgaggga	8.23	-1	aaaaagcgggcggca	9.69	1
8	-1023	-930	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggctcgttggcggggg	10.22	1	caaaggtgagccgca	9.86	1

128 motifs = 66 194 0 0 thresholds = 9.472 ||9.307 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2202	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	tccccatgcccccacc	9.84	-1	ttgcctggctgcac	10.63	-1
1	2057	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccccaacaccgccccc	12.27	-1	ttgcctggctgcac	10.63	-1
4	1063	1178	NM_078946	ll.36039	eve	NaN	NaN	NaN	cacccctgccgccgct	10.99	-1	tggcaggcgatcga	9.67	1
6	1291	1261	NM_078700	ll.33059	run	NaN	NaN	NaN	tcccccaccatccccc	9.55	-1	ttgccgccaaccaa	10.49	1
7	-2156	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cccacacacacccacc	10.50	-1	tcgttgggcggccc	9.45	-1
8	-1279	-1143	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacccatacacacgcc	9.48	-1	gcgctgccgagcga	9.63	1

129 motifs = 61 264 0 0 thresholds = 9.840 ||7.927 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3474	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	aaagggtt	9.05	-1
5	-4224	-4310	NM_079253	ll.38995	h	NaN	NaN	NaN	cacttggccagcag	11.38	-1	aaaggatt	8.87	-1
10	-2207	-2159	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	aaaggatt	8.87	-1
10	-2207	-2223	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	aacgggtt	8.11	-1
12	-1692	-1815	NM_057311	ll.34669	nub	NaN	NaN	NaN	cgactgcccgactg	10.26	1	aaaggatt	8.87	-1

130 motifs = 246 270 0 0 thresholds = 6.627 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1352	-1417	NM_169233	ll.41032	hb	NaN	NaN	NaN	aggtagac	8.16	-1	taatcctttc	8.21	-1
2	-1476	-1314	NM_079463	ll.40287	kni	NaN	NaN	NaN	aggtatac	7.56	-1	taaccctttt	10.31	-1
2	-1476	-1344	NM_079463	ll.40287	kni	NaN	NaN	NaN	aggtatac	7.56	-1	taaccctttt	10.31	-1
2	-1476	-1364	NM_079463	ll.40287	kni	NaN	NaN	NaN	aggtatac	7.56	-1	caaccctttt	8.65	-1
3	-3769	-3757	NM_079143	ll.38012	kr	NaN	NaN	NaN	aggtaggc	8.51	-1	taatccgttt	8.27	-1
3	-3904	-3757	NM_079143	ll.38012	kr	NaN	NaN	NaN	cggtaggc	6.69	-1	taatccgttt	8.27	-1
5	-4933	-4905	NM_079253	ll.38995	h	NaN	NaN	NaN	aggtatac	7.56	-1	taatcctttt	8.87	-1
6	-3122	-2996	NM_078700	ll.33059	run	NaN	NaN	NaN	aggtaggc	8.51	-1	taatcctttg	7.74	-1
8	620	450	NM_164966	ll.34569	salm	NaN	NaN	NaN	aggtaggc	8.51	-1	aaacccattt	7.39	-1
10	-231	-252	NM_080310	ll.31227	gt	NaN	NaN	NaN	aggtaggc	8.51	-1	tcaccccttt	7.63	-1
10	-231	-325	NM_080310	ll.31227	gt	NaN	NaN	NaN	aggtaggc	8.51	-1	aaaccctttc	7.90	-1

131 motifs = 238 268 0 0 thresholds = 7.759 ||6.314 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3258	-3136	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatga	6.70	-1
1	-3258	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatga	6.70	-1
1	-3268	-3136	NM_169233	ll.41032	hb	NaN	NaN	NaN	gtgtcttt	8.13	1	ttttatga	6.70	-1
1	-3268	-3424	NM_169233	ll.41032	hb	NaN	NaN	NaN	gtgtcttt	8.13	1	ttttatga	6.70	-1
4	-789	-622	NM_078946	ll.36039	eve	NaN	NaN	NaN	atagatac	7.76	-1	ttttatgg	6.31	-1
4	-789	-936	NM_078946	ll.36039	eve	NaN	NaN	NaN	atagatac	7.76	-1	ttttatgc	6.31	-1
5	-3885	-3741	NM_079253	ll.38995	h	NaN	NaN	NaN	aaagatac	9.25	-1	ttttatgt	6.34	-1
5	-3885	-4048	NM_079253	ll.38995	h	NaN	NaN	NaN	aaagatac	9.25	-1	ttttatgt	6.34	-1
7	1523	1426	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaggtac	7.85	-1	ttttatgg	6.31	-1
8	3889	4033	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatgt	6.34	-1
8	2138	2285	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaaggtac	7.85	-1	ttttatgg	6.31	-1
9	2242	2220	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatgg	6.31	-1
9	-490	-478	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaagatac	9.25	-1	ttttatgc	6.31	-1
10	-4475	-4598	NM_080310	ll.31227	gt	NaN	NaN	NaN	atagatac	7.76	-1	ttttatgc	6.31	-1
11	-2876	-2856	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatga	6.70	-1
11	-2876	-3002	NM_164546	ll.33583	odd	NaN	NaN	NaN	aaagacac	8.13	-1	ttttatgg	6.31	-1
13	867	762	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gtatcttt	9.25	1	ttttatgg	6.31	-1

132 motifs = 95 99 0 0 thresholds = 10.183 ||8.986 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4239	-4049	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	taaaatttcttttttttaaa	9.29	-1
1	-4239	-4081	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	tattttaaaaattatttaaa	9.25	1
1	-4239	-4134	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	ttttataaatttaatgtgtt	11.41	1
5	-4451	-4270	NM_079253	ll.38995	h	NaN	NaN	NaN	tcggccaggagg	11.56	-1	aaactccaatatttaccaaa	10.89	-1
7	2030	1860	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcggccagagag	10.30	-1	ttcaaacaaaatttgttaaa	11.85	-1
9	4398	4543	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tcggccataaac	10.23	-1	tgcacatgttttttaataaa	10.81	-1

133 motifs = 203 261 0 0 thresholds = 9.319 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-417	-226	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaggcagctgca	9.63	1	tcactcag	8.28	1
1	-417	-266	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaggcagctgca	9.63	1	ctgagtga	8.28	-1
1	-417	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaggcagctgca	9.63	1	gtgagtga	7.88	-1
6	-77	7	NM_078700	ll.33059	run	NaN	NaN	NaN	caaacgccggcagag	11.50	1	ctgagtga	8.28	-1
7	-538	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cagtgctgtcttttt	9.56	-1	ttgagtgc	8.48	-1
7	-538	-417	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cagtgctgtcttttt	9.56	-1	ttgagtga	8.87	-1
8	-193	-342	NM_164966	ll.34569	salm	NaN	NaN	NaN	caaaggccagcggta	12.09	1	ctgagtgc	7.89	-1
8	-930	-1090	NM_164966	ll.34569	salm	NaN	NaN	NaN	caaaggtgagccgca	9.86	1	gtgagtga	7.88	-1
8	-2756	-2791	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaaatgagcgcagag	10.20	1	gtgagtga	7.88	-1
13	-4664	-4477	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	cacagcccccatttt	9.52	-1	ctgagtgc	7.89	-1

134 motifs = 61 184 0 0 thresholds = 9.840 ||7.532 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3390	-3353	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgatcggaccacag	9.84	-1	ttttttgcga	8.18	-1
5	605	634	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	tttttagcca	9.79	-1
6	451	281	NM_078700	ll.33059	run	NaN	NaN	NaN	cactcggccagcag	12.65	-1	ttgttggcca	8.04	-1
9	-4182	-4085	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	tttatggcca	7.91	-1
9	-4182	-4287	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cagtcggacagcag	12.51	-1	ttttttgcca	10.70	-1
10	-2207	-2265	NM_080310	ll.31227	gt	NaN	NaN	NaN	cgttcggccatcag	11.46	-1	tttttaggca	8.40	-1

135 motifs = 48 173 0 0 thresholds = 7.864 ||8.143 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2302	2208	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttcgccttt	8.01	-1	cccctgcccccttggcc	9.67	-1
1	2263	2208	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttggctttg	8.51	-1	cccctgcccccttggcc	9.67	-1
1	2023	2208	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttccattt	11.07	-1	cccctgcccccttggcc	9.67	-1
1	2014	2208	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaatggcaaa	10.58	-1	cccctgcccccttggcc	9.67	-1
1	-1214	-1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttacattt	8.38	-1	cctctgccaacgcccta	9.40	-1
2	278	457	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttgctttt	10.25	-1	gcgtcccgaggcagcgg	10.83	1
2	-2658	-2535	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttcgcattt	9.65	-1	tagctgccatttccgac	9.52	-1
4	-338	-258	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttcgcattt	9.65	-1	cttccgccggcggacac	8.84	-1
5	-965	-988	NM_079253	ll.38995	h	NaN	NaN	NaN	tttggctttt	9.76	-1	tagcccgttggcggcta	8.68	1
5	-2125	-2058	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	gtgccgcctctgccgcc	8.37	-1
5	-2125	-2082	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttgctttt	10.25	-1	cctctgccgacgctgac	10.32	1
6	-266	-184	NM_078700	ll.33059	run	NaN	NaN	NaN	tttcccattt	10.20	-1	tacctgccccggcaccc	9.78	-1
6	-274	-184	NM_078700	ll.33059	run	NaN	NaN	NaN	aaatgggaaa	10.20	1	tacctgccccggcaccc	9.78	-1
6	-371	-184	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcctttt	10.80	-1	tacctgccccggcaccc	9.78	-1
6	-574	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcctttt	10.80	-1	cacccgcccccgccccc	11.37	-1
6	-644	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	tttcccattt	10.20	-1	cacccgcccccgccccc	11.37	-1
7	-1996	-1891	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttacattt	8.38	-1	gagtacctgggcagcag	9.32	1
7	-1996	-1960	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttacattt	8.38	-1	cacctgccacgggccca	9.41	-1
8	1962	1804	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttacattt	8.38	-1	ttgctgcgcttttcccc	8.14	-1
8	1648	1804	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgctttg	8.99	-1	ttgctgcgcttttcccc	8.14	-1
8	760	593	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgcattt	10.51	-1	ggcatcagaggcagaaa	9.24	1
8	535	593	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttccattt	11.07	-1	ggcatcagaggcagaaa	9.24	1
10	-238	-360	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgcccttt	8.94	-1	gagggaaagggcagccg	9.36	1
10	-245	-360	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggccaaa	8.39	-1	gagggaaagggcagccg	9.36	1
10	-518	-360	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttcccattg	8.95	-1	gagggaaagggcagccg	9.36	1
11	67	43	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttgctttt	10.25	-1	ctgctgccgctgagcga	9.94	-1
12	3099	3266	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttgcctttg	9.06	-1	cagcttccgccgccgcc	8.78	-1

136 motifs = 49 233 0 0 thresholds = 8.665 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2501	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	acaccaaaaattata	8.83	1	gctaccta	7.73	-1
1	-2535	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	acaccaaaaattata	8.83	1	gctaccta	7.73	-1
1	-3256	-3439	NM_169233	ll.41032	hb	NaN	NaN	NaN	tgtatctttgtgtgt	10.08	-1	gctacctg	8.64	-1
2	518	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttctattttttgttt	10.38	-1	tctacctg	8.68	-1
2	-1275	-1302	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttctttttggcttt	10.50	-1	gctacctg	8.64	-1
3	-1276	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	tatttgtgtgccttt	9.68	-1	cctaccta	7.98	-1
3	-1369	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	tgcgaattttgtttt	9.98	-1	cctaccta	7.98	-1
5	-345	-296	NM_079253	ll.38995	h	NaN	NaN	NaN	tgtgtgtgtgtgtgt	10.61	-1	gctaccta	7.73	-1
5	-345	-320	NM_079253	ll.38995	h	NaN	NaN	NaN	tgtgtgtgtgtgtgt	10.61	-1	gctacctg	8.64	-1
6	-241	-161	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttgctgtggttgt	9.00	-1	gctaccta	7.73	-1
6	-298	-161	NM_078700	ll.33059	run	NaN	NaN	NaN	tttgtgtgtgtgtgt	10.43	-1	gctaccta	7.73	-1
6	-333	-161	NM_078700	ll.33059	run	NaN	NaN	NaN	acaggcacactaaca	9.24	1	gctaccta	7.73	-1
6	-573	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaataaaattcaaa	10.80	1	cctacctg	8.89	-1
6	-595	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaataaaattcaaa	10.80	1	cctacctg	8.89	-1
7	-1094	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaatacaaaaataaa	11.00	1	cctacctg	8.89	-1
7	-3929	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tattattttggcttt	9.95	-1	tctaccta	7.77	-1
7	-3962	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tattattttggcttt	9.95	-1	tctaccta	7.77	-1
8	760	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	tatttctttgatttt	10.40	-1	cctaccta	7.98	-1
8	632	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaattcaaaagagca	9.14	1	cctaccta	7.98	-1
10	-2053	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttacgttttttttt	10.98	-1	tctacctg	8.68	-1
12	3987	3969	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaaggcacattaata	8.87	1	gctaccta	7.73	-1

137 motifs = 124 220 0 0 thresholds = 8.419 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3507	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttttttt	10.36	-1	gcggccacgaaacg	10.44	1
1	-3580	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	tctttttgtt	9.81	-1	gcgcacaaaaaacg	10.98	1
1	-3634	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	tgtttctttt	10.33	-1	gcgcacaaaaaacg	10.98	1
2	347	219	NM_079463	ll.40287	kni	NaN	NaN	NaN	tcttgttttt	9.15	-1	acgatcgcgaatcg	9.17	1
4	-2443	-2464	NM_078946	ll.36039	eve	NaN	NaN	NaN	tctttttgtt	9.81	-1	cggctcgtggacgc	9.54	-1
6	-4933	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	tttttctttt	9.11	-1	gcggtcggaagccg	10.04	1
7	-491	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttttttt	10.36	-1	gcgcacaaaaggcg	11.02	1
8	2784	2836	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttttt	10.36	-1	gcgcacgagaagcg	11.55	1
8	-736	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgcttttttt	10.05	-1	gcgagcgagaggcg	10.64	1
9	6572	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tgtttctttt	10.33	-1	gcgtacacaaaacg	10.40	1

138 motifs = 205 219 0 0 thresholds = 9.121 ||9.543 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2708	-2633	NM_169233	ll.41032	hb	NaN	NaN	NaN	tagcagagatttgc	9.20	1	ttttggtaaattgtttggttt	9.57	-1
2	237	267	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgaatcgctgcaa	10.53	-1	atccaacaaaaaaaagcaaaa	12.15	1
4	-384	-565	NM_078946	ll.36039	eve	NaN	NaN	NaN	cggcagggattcgc	10.02	1	tttcgccgttttattgccaat	12.61	-1
5	-146	-20	NM_079253	ll.38995	h	NaN	NaN	NaN	gctacgctccgcaa	9.54	-1	tttcggtcttttaatcgcact	11.40	-1
8	2016	1896	NM_164966	ll.34569	salm	NaN	NaN	NaN	tcgcagcgatttgc	10.53	1	tttttctttttttagcttact	9.82	-1

139 motifs = 74 237 0 0 thresholds = 9.608 ||7.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1563	1555	NM_169233	ll.41032	hb	NaN	NaN	NaN	gacgctcgcag	9.81	-1	gcgagcgt	8.16	-1
4	1718	1623	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctgctctcag	10.27	-1	gcgagcgg	9.02	-1
6	-2436	-2508	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgctctcag	11.24	-1	gcgagcgg	9.02	-1
6	-2516	-2508	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgctcgctg	11.09	-1	gcgagcgg	9.02	-1
9	6498	6490	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gacgctcgccg	10.09	-1	gcgagcgt	8.16	-1
9	4264	4272	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgctcgccg	11.37	-1	gcgagcgg	9.02	-1
11	-159	-77	NM_164546	ll.33583	odd	NaN	NaN	NaN	gctgctctcgg	9.86	-1	gcgagcgg	9.02	-1
12	2452	2460	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgctcgctg	11.09	-1	gcgagcgg	9.02	-1

140 motifs = 149 220 0 0 thresholds = 9.536 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3453	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	gccgcccagccaccc	11.43	-1	gcggccacgaaacg	10.44	1
5	-819	-800	NM_079253	ll.38995	h	NaN	NaN	NaN	cccaaccacccaacc	11.34	-1	cgcctagcgtgcgc	10.43	-1
6	-4754	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	ggggagggggatggg	9.58	1	gcggtcggaagccg	10.04	1
8	2781	2836	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcacgcccccccccc	10.23	-1	gcgcacgagaagcg	11.55	1

141 motifs = 76 233 0 0 thresholds = 8.075 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2504	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttttttttcaaaaat	8.91	-1	gctaccta	7.73	-1
2	670	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaaaaaatgaaaatgaac	8.62	1	tctacctg	8.68	-1
3	-1259	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	tctgcttttgtttggttt	8.60	-1	cctaccta	7.98	-1
3	-3580	-3430	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttgttttttttttcagtt	10.09	-1	tctacctg	8.68	-1
3	-3580	-3480	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttgttttttttttcagtt	10.09	-1	tctacctg	8.68	-1
4	-2219	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	attgggccgaaaaaaaaa	8.57	1	cctaccta	7.98	-1
6	-583	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	aaagcgaagaaaaggaaa	12.06	1	cctacctg	8.89	-1
7	-1082	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaaatacaaaaataaa	12.35	1	cctacctg	8.89	-1
7	-1096	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaaatacaaaaataaa	12.35	1	cctacctg	8.89	-1
7	-3919	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttcatttcattatttt	8.09	-1	tctaccta	7.77	-1
7	-3959	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tattattttggctttatt	8.76	-1	tctaccta	7.77	-1
8	513	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	tattgttttctgaagttt	9.19	-1	cctaccta	7.98	-1
10	-379	-224	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaactgcgaaaaccaaa	11.54	1	cctacctg	8.89	-1
11	-4853	-4960	NM_164546	ll.33583	odd	NaN	NaN	NaN	aataaccagaaaatggta	8.97	1	gctaccta	7.73	-1

142 motifs = 199 220 0 0 thresholds = 8.592 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1602	-1642	NM_169233	ll.41032	hb	NaN	NaN	NaN	atcagcgccgctg	9.39	-1	gcgaacgctaatcg	10.58	1
4	-2061	-1983	NM_078946	ll.36039	eve	NaN	NaN	NaN	agcgacctcgctg	8.68	-1	cggtttatggccgc	9.56	-1
5	-2081	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	gcctctgccgccg	9.20	-1	gcgaccacaaaacg	11.08	1
6	-4619	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgcagccgcag	9.24	-1	gcggtcggaagccg	10.04	1
6	-4695	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgacgtcgctg	11.34	-1	gcggtcggaagccg	10.04	1
6	-4707	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgacgtcgctg	11.34	-1	gcggtcggaagccg	10.04	1
8	-776	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtcgcagtcgctg	10.91	-1	gcgagcgagaggcg	10.64	1

143 motifs = 17 61 0 0 thresholds = 6.661 ||9.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3421	-3390	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaaaaactaaatat	7.17	1	cgatcggaccacag	9.84	-1
5	-776	-858	NM_079253	ll.38995	h	NaN	NaN	NaN	tgatcttgtttactg	7.28	-1	ccactgcccgatcg	10.48	1
12	-1557	-1692	NM_057311	ll.34669	nub	NaN	NaN	NaN	aagaaaactaaacca	7.71	1	cgactgcccgactg	10.26	1
13	-1265	-1312	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttcttgtttattt	7.44	-1	ccgttggccgattg	11.86	1

144 motifs = 208 214 0 0 thresholds = 8.478 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1244	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccgaccccccccc	9.50	-1	tttgcccgctc	10.40	-1
5	865	825	NM_079253	ll.38995	h	NaN	NaN	NaN	cccaccagctccc	9.17	-1	ttgggcggcac	9.83	-1
5	-4351	-4173	NM_079253	ll.38995	h	NaN	NaN	NaN	cccacccgctccc	11.75	-1	tttgccggctc	10.40	-1
6	-702	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	accacccgccccc	9.28	-1	tttggcggccc	10.92	-1
8	-972	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctctctcga	8.51	-1	ttttgcggctc	10.49	-1
8	-1104	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcactcactccc	10.51	-1	ttttgcggctc	10.49	-1
8	-1114	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggagtgagtgag	10.51	1	ttttgcggctc	10.49	-1
9	1500	1549	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cgccgccaccccc	8.98	-1	attgccggctc	9.42	-1

145 motifs = 184 233 0 0 thresholds = 7.532 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3353	-3439	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttgcga	8.18	-1	gctacctg	8.64	-1
2	727	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttggcct	7.95	-1	tctacctg	8.68	-1
3	-868	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttttacca	8.86	-1	tctacctg	8.68	-1
6	-602	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	tttttcgcca	8.50	-1	cctacctg	8.89	-1
7	-1156	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttagcca	9.79	-1	cctacctg	8.89	-1
8	657	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttagaca	8.08	-1	cctaccta	7.98	-1
10	-2265	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttttaggca	8.40	-1	tctacctg	8.68	-1
12	3864	3969	NM_057311	ll.34669	nub	NaN	NaN	NaN	cttttggcca	8.08	-1	gctaccta	7.73	-1
12	3864	3747	NM_057311	ll.34669	nub	NaN	NaN	NaN	cttttggcca	8.08	-1	tctaccta	7.77	-1

146 motifs = 35 212 0 0 thresholds = 10.187 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-439	-396	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttggca	10.66	-1	caaaatgcagcgccagaaaatgcaaa	10.71	1
1	-2258	-2226	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttggct	10.39	-1	gaaaaaacctgaagtaaaatggcaaa	10.61	1
2	552	456	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttatggcc	11.48	-1	atttccatcttttccttatttttttg	9.75	-1
2	-520	-606	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggca	10.66	-1	aaaaaccggcggactttgaaaagaaa	10.47	1
3	-1139	-1001	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	tttcctttctacctgaatccgttttt	11.37	-1
3	-1139	-1133	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttatggca	11.06	-1	aaaaatctacataaaaccatttaaaa	12.57	1
4	-620	-519	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	tttcccgccctttcctcagcgttttg	9.33	-1
4	-620	-560	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	ttttcgccgttttattgccaattttt	12.42	-1
4	-1985	-1788	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtttatggcc	10.61	-1	tttttgttcccattgtgcgctttttt	12.73	-1
4	-1985	-2015	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtttatggcc	10.61	-1	ttttttgttttggccgaccgattttt	10.45	-1
5	957	998	NM_079253	ll.38995	h	NaN	NaN	NaN	gtttttggcc	10.20	-1	aaaaactgacttcatgcgagtccaaa	9.58	1
5	-2207	-2125	NM_079253	ll.38995	h	NaN	NaN	NaN	gtttttggcc	10.20	-1	tttttttttcttttttgtttattttc	14.83	-1
8	-1362	-1193	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttggct	10.39	-1	caaaatcttataaaccgaaattaaaa	11.34	1
8	-4489	-4563	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttatggct	10.80	-1	caaaaatgctcaacattaaaatcaaa	11.64	1
9	2628	2793	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggct	10.80	-1	tttcaacactttgtttactaattttt	9.27	-1
9	2628	2683	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggct	10.80	-1	aaaaaaataaaaaaaaccagctcaga	9.37	1
9	2319	2410	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttggct	10.39	-1	aaaaaaattaaaaattttaataaaaa	13.76	1
9	2319	2262	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttggct	10.39	-1	aaaaactttaagcgatttaaaaaaaa	11.43	1
9	2222	2410	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggca	11.06	-1	aaaaaaattaaaaattttaataaaaa	13.76	1
9	2222	2262	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttatggca	11.06	-1	aaaaactttaagcgatttaaaaaaaa	11.43	1
10	-1982	-2036	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggca	11.06	-1	tttttttttcgctgaatctggttttt	11.80	-1
10	-2076	-2036	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttttatggcc	11.48	-1	tttttttttcgctgaatctggttttt	11.80	-1
11	-2569	-2575	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggcc	11.48	-1	tttcaggtctttccaaattatttttt	11.91	-1
11	-2569	-2736	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggcc	11.48	-1	tttgtacttcgattttcgattttttt	12.47	-1
11	-2657	-2575	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	tttcaggtctttccaaattatttttt	11.91	-1
11	-2657	-2736	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	tttgtacttcgattttcgattttttt	12.47	-1
11	-2657	-2775	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttatggct	10.80	-1	ttttttgctctcgttgttatattttt	11.44	-1
13	-335	-414	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	aaaaaaaaagaagcaagagaaagaaa	13.47	1
13	-826	-716	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggccataaaa	11.48	1	attttaatatattttattatattttg	9.03	-1
13	-826	-860	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggccataaaa	11.48	1	tttattttataaaacttattattttt	11.92	-1

147 motifs = 183 220 0 0 thresholds = 8.369 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-279	-145	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctttccccatccc	8.59	-1	cggctctcgtgcgc	11.01	-1
5	-2067	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	caacgcctctgcc	10.11	-1	gcgaccacaaaacg	11.08	1
6	-4595	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgccgcgctgcc	8.54	-1	gcggtcggaagccg	10.04	1
6	-4753	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	ccatccccctccc	10.62	-1	gcggtcggaagccg	10.04	1
6	-4761	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gggagggggatgg	10.62	1	gcggtcggaagccg	10.04	1
8	-627	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctcgc	10.13	-1	acgtacgcaaaccg	9.72	1
8	-627	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctcccgctcgc	10.13	-1	gcgagcgagaggcg	10.64	1
9	2874	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cgttgccgctctc	8.80	-1	gcgcgcagaagtcg	9.28	1

148 motifs = 49 215 0 0 thresholds = 8.665 ||10.281 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	406	519	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttattttttactgt	9.96	-1	tgactcgggaaaaatcg	10.28	1
2	-1714	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttttttttttt	12.68	-1	ctaattaccccgggaaa	13.46	-1
2	-2434	-2383	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttattgtgttttt	11.36	-1	tttcccgggaaaatttg	13.52	1
4	-2725	-2616	NM_078946	ll.36039	eve	NaN	NaN	NaN	tatttatgttttttt	11.17	-1	tttcccggggctacttg	12.31	1
5	-345	-408	NM_079253	ll.38995	h	NaN	NaN	NaN	tgtgtgtgtgtgtgt	10.61	-1	cccattcccgcgagcca	10.49	-1
8	-878	-862	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttcttctttgtatgt	9.34	-1	tggcccgagagaaagag	10.90	1

149 motifs = 86 88 0 0 thresholds = 10.213 ||9.584 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1223	-1192	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttgtaaatattgct	10.68	-1	ctgccaacgc	9.82	-1
6	133	-13	NM_078700	ll.33059	run	NaN	NaN	NaN	acgaattttttccaa	10.55	1	ctgccaacga	10.82	-1
9	2520	2577	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaaattattttccaa	11.52	1	cggccagcga	10.19	-1
13	-4570	-4387	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	atgaaaattttccaa	11.52	1	ttgccaacga	9.63	-1

150 motifs = 85 87 0 0 thresholds = 9.914 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1690	-1578	NM_079463	ll.40287	kni	NaN	NaN	NaN	ataaaaatgaatcgatt	10.95	1	gccttttgtgc	10.78	-1
4	-4547	-4465	NM_078946	ll.36039	eve	NaN	NaN	NaN	aataatcaaaacacctt	10.15	1	gccatttggac	10.19	-1
7	-657	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ataaatttgaaattttt	10.98	1	gccttttgtgc	10.78	-1
8	3556	3654	NM_164966	ll.34569	salm	NaN	NaN	NaN	attaatttcaattaatt	10.86	1	gccatttggcc	10.29	-1
9	-992	-887	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	agaaaagtaaatttctt	10.99	1	gccgtttgtgc	10.72	-1

151 motifs = 233 257 0 0 thresholds = 7.728 ||8.154 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2668	-2639	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctaccta	7.73	-1	aaaccaaa	8.15	-1
2	-1302	-1282	NM_079463	ll.40287	kni	NaN	NaN	NaN	gctacctg	8.64	-1	aagccaaa	9.57	-1
3	-1012	-1180	NM_079143	ll.38012	kr	NaN	NaN	NaN	tctacctg	8.68	-1	aaaccaaa	8.15	-1
3	-1190	-1180	NM_079143	ll.38012	kr	NaN	NaN	NaN	cctaccta	7.98	-1	aaaccaaa	8.15	-1
3	-1190	-1265	NM_079143	ll.38012	kr	NaN	NaN	NaN	cctaccta	7.98	-1	aaaccaaa	8.15	-1
5	-320	-501	NM_079253	ll.38995	h	NaN	NaN	NaN	gctacctg	8.64	-1	aagccaaa	9.57	-1
7	-4098	-3969	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tctaccta	7.77	-1	aagccaaa	9.57	-1
10	-224	-363	NM_080310	ll.31227	gt	NaN	NaN	NaN	cctacctg	8.89	-1	aaaccaaa	8.15	-1
10	-2208	-2015	NM_080310	ll.31227	gt	NaN	NaN	NaN	tctacctg	8.68	-1	aagccaaa	9.57	-1
11	-4084	-3998	NM_164546	ll.33583	odd	NaN	NaN	NaN	gctacctg	8.64	-1	aaaccaaa	8.15	-1
11	-4084	-4174	NM_164546	ll.33583	odd	NaN	NaN	NaN	gctacctg	8.64	-1	aagccaaa	9.57	-1

152 motifs = 52 58 0 0 thresholds = 9.481 ||10.008 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-3146	-3075	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaattattgacttgtctttt	10.01	-1	acctgcaattt	10.72	-1
4	-1545	-1666	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaattatgccagtttgtttt	11.52	-1	acctgcaattg	11.22	-1
7	-880	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaatgtattggaatattt	12.29	1	atctgcaattt	10.44	-1
7	-899	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaatgtattggaatattt	12.29	1	atctgcaattt	10.44	-1
9	5875	6032	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaaaatatgaaataaatttt	12.87	1	atctgcaatcg	10.64	-1
9	5857	6032	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaaaatatgaaataaatttt	12.87	1	atctgcaatcg	10.64	-1
12	1313	1458	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaattgtaacaaacactttt	11.66	-1	aactgcaatct	10.47	-1

153 motifs = 246 258 0 0 thresholds = 6.627 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	578	557	NM_169233	ll.41032	hb	NaN	NaN	NaN	aggtagaa	6.63	-1	ttttttac	8.11	-1
2	-1476	-1591	NM_079463	ll.40287	kni	NaN	NaN	NaN	aggtatac	7.56	-1	ttttttac	8.11	-1
3	-1019	-866	NM_079143	ll.38012	kr	NaN	NaN	NaN	aggtagaa	6.63	-1	ttttttac	8.11	-1
3	-1019	-984	NM_079143	ll.38012	kr	NaN	NaN	NaN	aggtagaa	6.63	-1	ttttttac	8.11	-1
3	-1019	-998	NM_079143	ll.38012	kr	NaN	NaN	NaN	aggtagaa	6.63	-1	ctttttac	9.53	1
3	-1197	-998	NM_079143	ll.38012	kr	NaN	NaN	NaN	aggtaggc	8.51	-1	ctttttac	9.53	1
5	-4933	-4845	NM_079253	ll.38995	h	NaN	NaN	NaN	aggtatac	7.56	-1	ctttttac	9.53	-1
7	660	621	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aggtagaa	6.63	-1	ctttttac	9.53	-1
12	-3276	-3094	NM_057311	ll.34669	nub	NaN	NaN	NaN	aggtaggc	8.51	-1	ttttttac	8.11	-1

154 motifs = 48 246 0 0 thresholds = 7.864 ||6.627 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	643	578	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttggcattt	10.03	-1	aggtagaa	6.63	-1
1	-1214	-1352	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttacattt	8.38	-1	aggtagac	8.16	-1
2	-1522	-1476	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttccattt	11.07	-1	aggtatac	7.56	-1
3	-3350	-3423	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgcattg	9.26	-1	aggtagac	8.16	-1
3	-3367	-3423	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttgacattt	7.90	-1	aggtagac	8.16	-1
3	-3819	-3769	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgctttt	10.25	-1	aggtaggc	8.51	-1
3	-3819	-3904	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgctttt	10.25	-1	cggtaggc	6.69	-1
4	-2371	-2190	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttccattg	9.82	-1	aggtagga	6.97	-1
6	-574	-729	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcctttt	10.80	-1	aggtaggc	8.51	-1
6	-644	-729	NM_078700	ll.33059	run	NaN	NaN	NaN	tttcccattt	10.20	-1	aggtaggc	8.51	-1
8	760	620	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgcattt	10.51	-1	aggtaggc	8.51	-1
8	535	620	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttccattt	11.07	-1	aggtaggc	8.51	-1
10	-238	-231	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttgcccttt	8.94	-1	aggtaggc	8.51	-1
10	-245	-231	NM_080310	ll.31227	gt	NaN	NaN	NaN	aaaggccaaa	8.39	-1	aggtaggc	8.51	-1
12	-3133	-3276	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttgccattg	9.33	-1	aggtaggc	8.51	-1
12	-3236	-3276	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttcctttt	10.80	-1	aggtaggc	8.51	-1

155 motifs = 49 58 0 0 thresholds = 8.665 ||10.008 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-379	-577	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaatgcaaaaggata	8.71	1	aactgcaattg	11.28	-1
1	-639	-577	NM_169233	ll.41032	hb	NaN	NaN	NaN	acagcaacaggaaaa	8.95	1	aactgcaattg	11.28	-1
4	-1610	-1666	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgtttgtgtttgt	11.21	-1	acctgcaattg	11.22	-1
7	-833	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tgcctcttttcgttt	9.06	-1	atctgcaattt	10.44	-1
8	3812	3646	NM_164966	ll.34569	salm	NaN	NaN	NaN	tatctttttttttgt	10.72	-1	aactgcaattg	11.28	-1
9	2679	2863	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaataaaaaaataaa	11.28	1	agctgcaattt	10.32	-1
12	1469	1458	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaataaacaccggca	8.68	1	aactgcaatct	10.47	-1
13	-1265	-1337	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttcttgtttattt	10.71	-1	caattgcagtt	11.28	1

156 motifs = 248 261 0 0 thresholds = 8.379 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-484	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccgctctc	8.71	-1	gtgagtga	7.88	-1
3	-106	-55	NM_079143	ll.38012	kr	NaN	NaN	NaN	ccgctcac	9.24	-1	gtgagtga	7.88	-1
3	-106	-220	NM_079143	ll.38012	kr	NaN	NaN	NaN	ccgctcac	9.24	-1	ttgagtga	8.87	-1
4	-4154	-4311	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccgctctc	8.71	-1	ctgagtgc	7.89	-1
7	-206	-160	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctctc	8.71	-1	ctgagtgc	7.89	-1
7	-206	-238	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctctc	8.71	-1	ttgagtga	8.87	-1
7	-206	-259	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctctc	8.71	-1	ttgagtgc	8.48	-1
7	-206	-321	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctctc	8.71	-1	ttgagtgc	8.48	-1
7	-206	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgctctc	8.71	-1	ttgagtgc	8.48	-1
8	-719	-571	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccgctcac	9.24	-1	gtgagtga	7.88	-1
8	-719	-595	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccgctcac	9.24	-1	gtgagtga	7.88	-1
8	-1118	-1090	NM_164966	ll.34569	salm	NaN	NaN	NaN	tcgctcac	8.38	-1	gtgagtga	7.88	-1
11	182	102	NM_164546	ll.33583	odd	NaN	NaN	NaN	ccgctctc	8.71	-1	ttgagtga	8.87	-1

157 motifs = 237 241 0 0 thresholds = 7.478 ||8.467 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2759	-2647	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtgagcga	7.48	-1	cgaaaggg	9.07	-1
5	-4541	-4470	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgagcgt	8.16	-1	cgaaaggg	9.07	-1
8	-713	-861	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtgagcgg	9.02	-1	n	NaN	NaN
9	6490	6328	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gcgagcgt	8.16	-1	ggaaaggg	9.07	-1
11	-77	-127	NM_164546	ll.33583	odd	NaN	NaN	NaN	gcgagcgg	9.02	-1	n	NaN	NaN
11	-2226	-2185	NM_164546	ll.33583	odd	NaN	NaN	NaN	gcgagcgg	9.02	-1	cgaaaggg	9.07	-1
12	-2921	-3019	NM_057311	ll.34669	nub	NaN	NaN	NaN	gtgagcgg	9.02	-1	n	NaN	NaN
13	-2174	-2033	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gtgagcga	7.48	-1	n	NaN	NaN

158 motifs = 163 188 0 0 thresholds = 8.570 ||8.817 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-60	-4	NM_079143	ll.38012	kr	NaN	NaN	NaN	ccggcgtgtgtgcgtacgagggtg	9.54	-1	gcagcgaatt	9.65	-1
4	1346	1171	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcggagcaaccgcctgcgggcggg	9.61	1	ccagcgaatt	9.37	-1
5	-209	-223	NM_079253	ll.38995	h	NaN	NaN	NaN	gcggcgatttagcctacgaacctg	11.13	-1	gcggcgattt	9.20	-1
5	-728	-687	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgacccccgagccgcagatacac	9.94	-1	ccagctattt	9.53	-1
5	-748	-687	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgacccccgagccgcagatacac	9.94	-1	ccagctattt	9.53	-1
8	-490	-684	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacacgtacgcaaaccggttgc	9.12	1	acagcaattt	9.03	-1
8	-538	-684	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacacacgtacgcaaaccggttgc	9.12	1	acagcaattt	9.03	-1
9	-1961	-2126	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gggctgcgtgggcgtggtggtggg	10.76	1	gcagcaattt	9.41	-1

159 motifs = 80 222 0 0 thresholds = 10.181 ||9.549 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1356	1189	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttcgccttcc	12.03	-1	ttttgcccgctct	10.32	-1
2	730	611	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcctgtt	10.75	-1	ttttcgcagcact	10.51	-1
2	462	611	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttttgcgtccc	11.63	-1	ttttcgcagcact	10.51	-1
4	-2023	-2217	NM_078946	ll.36039	eve	NaN	NaN	NaN	tgttttggccgacc	11.08	-1	ttttttcggccca	10.16	-1
6	-605	-679	NM_078700	ll.33059	run	NaN	NaN	NaN	gcgtggcgaaaaaa	11.15	1	ttttggcggccct	11.29	-1
8	-1366	-1553	NM_164966	ll.34569	salm	NaN	NaN	NaN	agaaagccaaaaaa	11.55	1	ttttagctgcaca	9.84	-1

160 motifs = 198 249 0 0 thresholds = 8.838 ||7.245 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2974	2853	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttcgcagctc	9.40	-1	agttaagt	8.88	-1
3	606	558	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttcgcagctc	9.40	-1	agttaagt	8.88	-1
6	-1599	-1403	NM_078700	ll.33059	run	NaN	NaN	NaN	atcgccgatc	9.84	-1	agttaagt	8.88	-1
9	1066	904	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	atcgcagatc	9.56	-1	n	NaN	NaN
10	-4352	-4296	NM_080310	ll.31227	gt	NaN	NaN	NaN	atcgctgctc	10.09	-1	acttaagt	7.60	-1
10	-4352	-4302	NM_080310	ll.31227	gt	NaN	NaN	NaN	atcgctgctc	10.09	-1	acttaagt	7.60	-1

161 motifs = 212 233 0 0 thresholds = 8.953 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	456	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	atttccatcttttccttatttttttg	9.75	-1	tctacctg	8.68	-1
3	-1001	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttcctttctacctgaatccgttttt	11.37	-1	cctaccta	7.98	-1
3	-1133	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaaaatctacataaaaccatttaaaa	12.57	1	tctacctg	8.68	-1
3	-1133	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaaaatctacataaaaccatttaaaa	12.57	1	cctaccta	7.98	-1
3	-3009	-3081	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgagttcaataagcttcattttt	10.38	-1	tctacctg	8.68	-1
3	-3144	-3081	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttaaattattgacttgtctttttt	12.79	-1	tctacctg	8.68	-1
3	-3345	-3430	NM_079143	ll.38012	kr	NaN	NaN	NaN	caaaaaatatgtgtaactgaactaaa	9.00	1	tctacctg	8.68	-1
3	-3345	-3480	NM_079143	ll.38012	kr	NaN	NaN	NaN	caaaaaatatgtgtaactgaactaaa	9.00	1	tctacctg	8.68	-1
4	-2015	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttgttttggccgaccgattttt	10.45	-1	cctaccta	7.98	-1
4	-2377	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgttgctctttttatgagtttttt	12.04	-1	cctaccta	7.98	-1
6	-591	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaaaataaaattcaaagcgaagaaa	12.31	1	cctacctg	8.89	-1
7	-1089	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaaatacaaaaataaatatagaaa	11.33	1	cctacctg	8.89	-1
9	-1677	-1480	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaaaacaatcatcgatgtcgaacaaa	10.02	1	gctaccta	7.73	-1
10	-2036	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttttttttcgctgaatctggttttt	11.80	-1	tctacctg	8.68	-1
12	4028	3969	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaaaatgttagatggaatgactaaaa	10.10	1	gctaccta	7.73	-1

162 motifs = 168 214 0 0 thresholds = 8.465 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1159	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttggccgat	9.49	-1	tttgcccgctc	10.40	-1
4	-463	-535	NM_078946	ll.36039	eve	NaN	NaN	NaN	tgttggccatt	8.47	-1	ttttcccgccc	9.90	-1
5	960	825	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttggccatt	9.87	-1	ttgggcggcac	9.83	-1
6	-3053	-2874	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttggccgat	9.49	-1	ttttgcggccc	10.46	-1
8	-226	-284	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttggccaac	11.02	-1	ttttgcggcac	10.49	-1
8	-234	-284	NM_164966	ll.34569	salm	NaN	NaN	NaN	gttggccaaaa	11.02	-1	ttttgcggcac	10.49	-1
8	-319	-284	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttggcgagt	9.99	-1	ttttgcggcac	10.49	-1

163 motifs = 73 261 0 0 thresholds = 9.213 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-286	-226	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcttttggggatgggg	10.76	1	tcactcag	8.28	1
1	-286	-266	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcttttggggatgggg	10.76	1	ctgagtga	8.28	-1
1	-286	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcttttggggatgggg	10.76	1	gtgagtga	7.88	-1
4	-4207	-4311	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccctggccatcccac	10.30	-1	ctgagtgc	7.89	-1
6	-4754	-4838	NM_078700	ll.33059	run	NaN	NaN	NaN	cccctcccccgctggc	11.07	-1	ttgagtga	8.87	-1
7	-3348	-3197	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgatccggggagggg	11.01	1	ttgagtga	8.87	-1
12	4173	4204	NM_057311	ll.34669	nub	NaN	NaN	NaN	ccccaacccagaaccc	11.33	-1	ttgagtgc	8.48	-1
13	-313	-254	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccctttccccaccccc	12.01	-1	tcactcac	7.88	1

164 motifs = 87 146 0 0 thresholds = 9.586 ||8.014 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-437	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	cgttttttgg	8.72	-1
1	-420	-531	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	tgttttttgg	9.27	-1
2	-1578	-1718	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccttttgtgc	10.78	-1	tttttttttc	8.68	-1
5	-961	-1124	NM_079253	ll.38995	h	NaN	NaN	NaN	gcccttttggc	10.32	-1	ttttgttttg	8.02	-1
7	-583	-490	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccttttgtgc	10.78	-1	tttttttttg	11.20	-1
8	4174	4341	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccgtttggcc	10.57	-1	tgtttttttg	10.12	-1
8	3654	3811	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccatttggcc	10.29	-1	tttttttttg	11.20	-1
12	3866	3791	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcccttttggc	10.32	-1	tgtttgttgg	8.38	-1

165 motifs = 95 209 0 0 thresholds = 10.183 ||8.525 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1148	1100	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaagc	11.02	-1	aaaatgcaaatggcaaaaattctaaaa	8.55	1
1	1148	1000	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaagc	11.02	-1	ttttcttgttctcttcttgttgtttgt	8.53	-1
1	-4239	-4074	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcggccaaaggg	10.40	-1	caaaaaaatattttaaaaattatttaa	9.10	1
5	-4451	-4288	NM_079253	ll.38995	h	NaN	NaN	NaN	tcggccaggagg	11.56	-1	aaactccaatatttaccaaataccaaa	11.00	1
7	2030	1896	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcggccagagag	10.30	-1	aaagtcacacaaagaggaaactttaaa	10.42	1
7	2030	1859	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcggccagagag	10.30	-1	aaagtcacacaaagaggaaactttaaa	10.42	1
9	4398	4491	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tcggccataaac	10.23	-1	aaaatcatttcagctgtatttaacaaa	9.19	1
11	-2657	-2736	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	tatttgtacttcgattttcgatttttt	8.55	-1
11	-2657	-2775	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	tatttgtacttcgattttcgatttttt	8.55	1
11	-2657	-2798	NM_164546	ll.33583	odd	NaN	NaN	NaN	tcggccataaag	10.55	-1	ttcggtttatgatgattttgtgatttt	9.76	-1

166 motifs = 41 98 0 0 thresholds = 9.521 ||8.718 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-330	-280	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctttcactc	9.67	-1	tttccccatcccc	10.53	-1
1	-350	-280	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcgctc	12.70	-1	tttccccatcccc	10.53	-1
1	-478	-280	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcactt	10.10	-1	tttccccatcccc	10.53	-1
1	-2836	-2980	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccctctcgctt	9.86	-1	ttcgccctgcccc	8.72	-1
5	-3015	-2970	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctctttctc	10.62	-1	ctcccctaccccc	9.95	-1
6	-509	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctc	12.70	-1	ccgcccccgcccc	11.43	-1
6	-533	-702	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctt	11.40	-1	ccgcccccgcccc	11.43	-1
7	-2099	-1930	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcgctcgctg	9.52	-1	ctgcccttgcccc	9.67	-1
8	-1997	-2113	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctttctc	10.62	-1	ctgtcccaccccc	9.71	-1
8	-2383	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctcgcac	9.68	-1	ctcccccaacccc	11.55	-1
8	-2707	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctccctctc	10.32	-1	ctcccccaacccc	11.55	-1
13	-242	-319	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ctcactcactc	9.58	-1	tttccccaccccc	11.39	-1
13	-2106	-2209	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccctctcgctc	11.16	-1	cggcatgggggag	8.85	1

167 motifs = 163 222 0 0 thresholds = 8.570 ||9.549 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1289	1189	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcaacgcccctggccacgcccccc	10.39	-1	ttttgcccgctct	10.32	-1
4	-2146	-2217	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtgcaccttcggcggaaccgcagg	10.61	1	ttttttcggccca	10.16	-1
6	-695	-679	NM_078700	ll.33059	run	NaN	NaN	NaN	cgaacccctccgcaggagggccgc	11.10	1	ttttggcggccct	11.29	-1
6	-4716	-4853	NM_078700	ll.33059	run	NaN	NaN	NaN	gcagcgacgtcggcagcggcttcc	8.90	-1	ttttttctgcgtt	9.55	-1
8	-1032	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctgccaagggctcgttggcggg	8.57	1	cttttgcggctca	10.81	-1
12	-4479	-4370	NM_057311	ll.34669	nub	NaN	NaN	NaN	ccccctcgccgccgctgccgctgc	10.27	1	ctttggctgctca	10.51	-1

168 motifs = 35 185 0 0 thresholds = 10.187 ||8.374 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-439	-336	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttttggca	10.66	-1	cactcactcac	8.63	-1
2	-520	-459	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggca	10.66	-1	cacacacacac	12.62	-1
4	-1462	-1624	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttatggca	11.06	-1	caaacacaaac	9.50	-1
5	957	810	NM_079253	ll.38995	h	NaN	NaN	NaN	gtttttggcc	10.20	-1	tacacacacgc	9.51	-1
7	791	969	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatggca	11.06	-1	tacacacaccc	9.80	-1
8	-1362	-1280	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttggct	10.39	-1	cacacacacac	12.62	-1
8	-1362	-1290	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttggct	10.39	-1	gcgtgtgtatg	8.92	-1
8	-1362	-1307	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttggct	10.39	-1	catacacaccc	9.21	1
13	-335	-248	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	gtgtgtgtgtc	9.22	-1
13	-335	-254	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	cacacacacac	12.62	1
13	-335	-297	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	cacagacacac	9.13	-1
13	-335	-475	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttatggct	10.80	-1	cactcacacac	10.36	-1

169 motifs = 72 205 0 0 thresholds = 9.948 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-418	-384	NM_078946	ll.36039	eve	NaN	NaN	NaN	gatcggcgctttgt	10.14	-1	cggcagggattcgc	10.02	1
6	-2496	-2439	NM_078700	ll.33059	run	NaN	NaN	NaN	acaaaaggcagcgc	10.50	1	cagctgagagcggc	10.53	1
6	-2496	-2519	NM_078700	ll.33059	run	NaN	NaN	NaN	acaaaaggcagcgc	10.50	1	tcgcagcgagcggc	11.77	1
8	2028	2016	NM_164966	ll.34569	salm	NaN	NaN	NaN	tcgcagcgatttgc	10.25	-1	tcgcagcgatttgc	10.53	1
10	-4990	-4978	NM_080310	ll.31227	gt	NaN	NaN	NaN	gcaaatcgctgcaa	10.95	1	gcaaatcgctgcaa	10.44	-1

170 motifs = 93 103 0 0 thresholds = 10.453 ||10.441 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-1140	-1120	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttatggcaa	11.20	-1	ttttaaatggttt	10.45	-1
4	795	935	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttttggcca	11.74	-1	tttgaaaagtttt	10.87	-1
7	-4065	-3993	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatgtgcaa	11.19	-1	tttaaaatttatt	11.37	-1
8	169	207	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttcttggcaa	11.14	-1	tttcaaaaagttt	10.83	-1
8	-1487	-1686	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttaattgcaa	10.79	-1	tttaaaaattatt	11.47	-1
8	-3305	-3279	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttgtttgcca	10.55	-1	ttttaaaactatt	11.26	-1
12	2813	2688	NM_057311	ll.34669	nub	NaN	NaN	NaN	tttttaaggcaa	10.67	-1	ttttaaatcgatt	10.49	-1
12	-610	-475	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttatttgcca	11.33	-1	tttaaaatatttt	11.48	-1
13	-1760	-1648	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgccgagaaaa	10.54	1	aatgtatttaaaa	10.88	1

171 motifs = 253 258 0 0 thresholds = 7.840 ||7.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-4323	-4270	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggtggggg	8.26	-1	ttttttac	8.11	-1
5	-3690	-3661	NM_079253	ll.38995	h	NaN	NaN	NaN	ggaagggg	8.83	-1	ttttttac	8.11	-1
6	-4746	-4936	NM_078700	ll.33059	run	NaN	NaN	NaN	gggagggg	7.84	-1	ctttttac	9.53	-1
8	2774	2598	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggggggg	8.13	-1	ttttttac	8.11	-1
9	-1937	-1850	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ggtggggg	8.26	-1	ctttttac	9.53	-1
13	-356	-419	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccccctcc	9.13	1	gtaaaaaa	8.11	1

172 motifs = 59 61 0 0 thresholds = 8.095 ||9.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3457	-3390	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaacggcagccagc	8.71	1	cgatcggaccacag	9.84	-1
5	700	605	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaaggccgcaact	9.33	1	ccgctgcccaaatg	11.45	1
6	320	451	NM_078700	ll.33059	run	NaN	NaN	NaN	cagcagccgccgca	8.74	1	cactcggccagcag	12.65	-1
8	4432	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgctgctgctgttg	13.06	-1	cagtcggccagcag	13.16	-1
8	4346	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaacagctgcgact	9.42	1	cagtcggccagcag	13.16	-1
8	4265	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgctgctgctgttg	13.06	-1	cagtcggccagcag	13.16	-1
8	4085	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	agttgctgctattg	11.15	-1	cagtcggccagcag	13.16	-1
8	4061	4248	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgctgttgcttttg	9.21	1	cagtcggccagcag	13.16	-1
9	-4371	-4182	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tgctactgcagttg	9.14	-1	cagtcggacagcag	12.51	-1

173 motifs = 48 88 0 0 thresholds = 7.864 ||9.584 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1214	-1192	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttacattt	8.38	-1	ctgccaacgc	9.82	-1
8	-3973	-4128	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttccctttt	9.93	-1	cggccagcga	10.19	-1
9	2493	2577	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttgcctttt	10.31	-1	cggccagcga	10.19	-1
11	67	202	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttgctttt	10.25	-1	cggccaacga	9.58	-1
12	1330	1517	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttttcctttc	8.08	-1	ctcccagcga	9.70	-1
13	-96	62	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttttactttt	8.11	-1	tcgttggcaa	9.63	1

174 motifs = 100 234 0 0 thresholds = 9.655 ||8.919 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3466	-3628	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgcacaaaaaacg	11.76	1	aaaagaaa	9.40	-1
2	665	637	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgcgaaaaaaatg	10.54	1	aaaagaaa	9.40	-1
5	749	677	NM_079253	ll.38995	h	NaN	NaN	NaN	cgaatttatctcgc	10.66	-1	aaaagaaa	9.40	-1
7	-404	-602	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	aacagaaa	8.92	-1
7	-585	-602	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.06	1	aacagaaa	8.92	-1
8	-3830	-3668	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttaccttcgc	10.19	-1	aaaagaaa	9.40	-1
8	-3830	-3675	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgatttaccttcgc	10.19	-1	tttctttt	9.40	1
13	-1029	-850	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	aaaagaaa	9.40	-1

175 motifs = 138 212 0 0 thresholds = 10.512 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1280	1348	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccaaccgacccccccccctcctc	12.47	-1	tgtcgactttcatgttgttttttttt	9.37	-1
1	1280	1200	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccaaccgacccccccccctcctc	12.47	-1	ttttttgcccgctctgtctgtttttg	10.45	-1
1	1280	1114	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccaaccgacccccccccctcctc	12.47	-1	caaaaattctaaaacaatattttaaa	11.28	1
1	1250	1348	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctcctaagcaacgcccctggcc	13.65	1	tgtcgactttcatgttgttttttttt	9.37	-1
1	1250	1200	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctcctaagcaacgcccctggcc	13.65	1	ttttttgcccgctctgtctgtttttg	10.45	-1
1	1250	1114	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctcctaagcaacgcccctggcc	13.65	1	caaaaattctaaaacaatattttaaa	11.28	1
4	-2628	-2579	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgagatttcgcctctgccc	11.89	-1	caaaaagacgatccttaaaaaagaaa	11.85	1
6	-696	-591	NM_078700	ll.33059	run	NaN	NaN	NaN	cacccgcccccgcccccctcgac	10.51	-1	aaaaaataaaattcaaagcgaagaaa	12.31	1
6	-3942	-4042	NM_078700	ll.33059	run	NaN	NaN	NaN	gaggagaggcggagccacgatcg	12.36	1	ttttccgctctctgtcggtaattttt	10.35	-1
7	232	108	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cgtttctgtcgacgccgctgccc	11.27	-1	ccaaaaaaaaaaaaatagaaaacaaa	11.27	1
11	-617	-700	NM_164546	ll.33583	odd	NaN	NaN	NaN	gaggagcagcgagagctggcgcg	10.89	1	gaaaacgaatcaggcgcaaacacaaa	9.10	1

176 motifs = 34 42 0 0 thresholds = 10.531 ||10.229 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4059	-3896	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaatattttaaaaatt	11.94	-1	agtattttccaagt	11.48	-1
2	-3361	-3419	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaataaagttttggaatt	11.60	-1	gctttgcaaactgt	10.71	1
2	-3361	-3461	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaataaagttttggaatt	11.60	-1	gctttgcaaactgt	10.71	1
2	-3506	-3419	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaattgtgtttggttatt	12.26	-1	gctttgcaaactgt	10.71	1
2	-3506	-3461	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaattgtgtttggttatt	12.26	-1	gctttgcaaactgt	10.71	1
6	975	1067	NM_078700	ll.33059	run	NaN	NaN	NaN	aaagtgagttttttagtt	11.81	-1	gttttgaaaacatt	10.89	1
7	-460	-349	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaagtcaaatataaatt	11.97	1	acattttgccaaac	10.48	-1
9	3343	3293	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aagactcaaaaaattatt	11.51	1	attattttcaaatt	11.22	-1
9	-996	-961	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aagtagaaaagtaaattt	11.30	1	attttgcaaacact	10.25	1
12	-3884	-3869	NM_057311	ll.34669	nub	NaN	NaN	NaN	aaaatatctttacctttt	11.75	-1	actttgaaaaaaat	11.36	1
13	-2733	-2670	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	aataaagaaaattacatt	10.85	1	attatttaccaatt	11.19	-1

177 motifs = 173 248 0 0 thresholds = 8.143 ||8.379 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-4078	-4154	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccgctgccactgcctgc	9.86	-1	ccgctctc	8.71	-1
6	-2527	-2434	NM_078700	ll.33059	run	NaN	NaN	NaN	gaggtccttcgcagcga	8.40	1	ccgctctc	8.71	-1
7	-89	-206	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttgccgccgctgctgca	10.04	-1	ccgctctc	8.71	-1
8	-1023	-1092	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggctcgttggcggggg	10.22	1	tcgctcac	8.38	-1
8	-1023	-1118	NM_164966	ll.34569	salm	NaN	NaN	NaN	gggctcgttggcggggg	10.22	1	tcgctcac	8.38	-1
9	2960	2874	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ggcagcaaaggcagcca	9.86	1	ccgctctc	8.71	-1
11	43	182	NM_164546	ll.33583	odd	NaN	NaN	NaN	ctgctgccgctgagcga	9.94	-1	ccgctctc	8.71	-1
13	-3835	-3672	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ggcgccctaggcagcca	9.07	1	gtgagcga	8.38	1

178 motifs = 154 194 0 0 thresholds = 9.791 ||9.307 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2202	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	cccccacccctgccccc	13.99	-1	ttgcctggctgcac	10.63	-1
1	2061	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttggggtggggggggag	10.76	1	ttgcctggctgcac	10.63	-1
4	1066	1178	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccctgccgccgctcca	11.02	-1	tggcaggcgatcga	9.67	1
5	1275	1247	NM_079253	ll.38995	h	NaN	NaN	NaN	ccccaacctacgccgcc	11.22	-1	ttggccgccagcca	11.00	-1
6	1293	1261	NM_078700	ll.33059	run	NaN	NaN	NaN	cccccaccatcccccca	11.12	-1	ttgccgccaaccaa	10.49	1

179 motifs = 146 213 0 0 thresholds = 8.014 ||9.703 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-2052	-2170	NM_079143	ll.38012	kr	NaN	NaN	NaN	cgttttttgg	8.72	-1	aacagaaacccaatc	11.90	-1
4	520	592	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgtttgtttg	8.70	-1	atcccaatcccaatc	11.82	-1
5	991	881	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttttttc	8.68	-1	gattcggatttggct	11.60	1
5	695	881	NM_079253	ll.38995	h	NaN	NaN	NaN	ctttttttgg	9.80	-1	gattcggatttggct	11.60	1
6	-4960	-4901	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttttttgg	10.34	-1	acccgaaacacactc	10.90	-1
8	3811	3854	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttttttg	11.20	-1	atctgaatctgaatc	11.96	-1
8	-92	-31	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttttgg	10.34	-1	accaaaaacacactc	10.58	-1
9	4797	4769	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cttttttttg	10.66	-1	gattttgttgcggct	9.91	1
11	-2734	-2541	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttttttttc	8.68	-1	gatttggtttccgtt	10.49	1

180 motifs = 156 201 0 0 thresholds = 9.900 ||8.916 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1640	1655	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgcagcgacc	11.01	-1	tcgctgcgattggcc	10.54	-1
6	-2510	-2525	NM_078700	ll.33059	run	NaN	NaN	NaN	tcgcagcgagc	11.70	-1	ggtccttcgcagcga	10.91	1
7	-4446	-4461	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcgcagcgagc	11.70	-1	ctcctttcgcagcga	9.95	1
8	-395	-410	NM_164966	ll.34569	salm	NaN	NaN	NaN	gttcgcagcga	10.39	1	gaacgttcgcagcga	10.92	1

181 motifs = 80 171 0 0 thresholds = 10.181 ||8.997 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2262	-2150	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaacagccaaaaaa	10.91	1	gccgcaggacaaagg	10.24	1
2	730	823	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttggcctgtt	10.75	-1	cagttgctcagcagc	9.55	-1
6	-2242	-2258	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttttggccagtc	10.84	-1	gttttggtgggccgc	10.85	-1
8	4335	4249	NM_164966	ll.34569	salm	NaN	NaN	NaN	agaaagcaaaaaaa	11.35	1	cagtcggccagcagc	9.37	-1

182 motifs = 170 244 0 0 thresholds = 8.294 ||7.578 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-353	-178	NM_169233	ll.41032	hb	NaN	NaN	NaN	aatgagcgagtcag	9.09	1	cagaaatc	8.46	-1
1	-353	-464	NM_169233	ll.41032	hb	NaN	NaN	NaN	aatgagcgagtcag	9.09	1	cagaaatc	8.46	-1
1	-363	-178	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcagagcgagagag	9.45	1	cagaaatc	8.46	-1
1	-363	-464	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcagagcgagagag	9.45	1	cagaaatc	8.46	-1
2	-184	-12	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcgatcgctctct	9.96	-1	cagaaatc	8.46	-1
4	-2058	-1943	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgacctcgctgcat	9.48	-1	cagaaatc	8.46	-1
5	-3012	-2900	NM_079253	ll.38995	h	NaN	NaN	NaN	ctctttctctccct	8.74	-1	cagaaacc	9.31	-1
7	-1525	-1507	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cgcactcgctgtat	11.07	-1	cagaaacc	9.31	-1
11	-2361	-2536	NM_164546	ll.33583	odd	NaN	NaN	NaN	agtcagccagtgcg	8.64	1	cggaaacc	7.97	-1

183 motifs = 98 205 0 0 thresholds = 8.718 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1705	1715	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccaccccgcgccc	8.99	-1	ctgcagagcgcagc	10.88	1
6	-3795	-3808	NM_078700	ll.33059	run	NaN	NaN	NaN	ttaccccagcccc	10.61	-1	gccgatctctgcgg	11.04	-1
7	-1930	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgcccttgcccc	9.67	-1	ccgctgtgagtggc	10.37	1
12	-4470	-4531	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctccccctcgccg	9.89	-1	gcaaatcacagcag	9.44	-1

184 motifs = 74 124 0 0 thresholds = 9.608 ||8.419 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1563	1584	NM_169233	ll.41032	hb	NaN	NaN	NaN	gacgctcgcag	9.81	-1	tgtttttttt	11.58	-1
6	-49	69	NM_078700	ll.33059	run	NaN	NaN	NaN	gctgctcgccg	10.40	-1	tgtttctgtt	9.73	-1
9	6498	6572	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gacgctcgccg	10.09	-1	tgtttctttt	10.33	-1
11	180	88	NM_164546	ll.33583	odd	NaN	NaN	NaN	gccgctctccg	11.52	-1	tgttgctgtt	8.48	-1
12	2452	2540	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgctcgctg	11.09	-1	tctttttttt	10.40	-1

185 motifs = 45 141 0 0 thresholds = 9.535 ||9.669 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-3146	-3312	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccgccaccc	10.07	-1	actcaaacacac	10.58	-1
6	-48	-172	NM_078700	ll.33059	run	NaN	NaN	NaN	gctgctcgcc	9.63	-1	acgcacacaggc	10.36	-1
7	1097	956	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgctcgcc	9.63	-1	atacacacaccc	10.78	-1
7	-1973	-2157	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacc	9.76	-1	acacacacccac	9.81	-1
9	6785	6597	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gctgcccacc	9.91	-1	atacacacacac	11.73	-1
12	-442	-281	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctgcccgcc	10.41	-1	tcacacacacac	9.77	-1
12	-442	-390	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctgcccgcc	10.41	-1	atacacacatac	9.78	-1

186 motifs = 87 252 0 0 thresholds = 9.586 ||7.303 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-539	-675	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccgttttggc	10.72	-1	cgggaaat	8.68	-1
6	-2498	-2654	NM_078700	ll.33059	run	NaN	NaN	NaN	gccttttgtac	9.59	-1	cgggaaat	8.68	-1
8	4174	4367	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccgtttggcc	10.57	-1	agggaaaa	7.30	-1
9	3164	3262	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgggc	11.67	-1	agggaaaa	7.30	-1
10	-241	-353	NM_080310	ll.31227	gt	NaN	NaN	NaN	gccctttggcc	10.16	-1	agggaaag	7.65	-1

187 motifs = 41 241 0 0 thresholds = 9.521 ||8.467 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-330	-496	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctttcactc	9.67	-1	n	NaN	NaN
1	-350	-496	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcgctc	12.70	-1	n	NaN	NaN
1	-478	-496	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctctcactt	10.10	-1	n	NaN	NaN
2	-442	-557	NM_079463	ll.40287	kni	NaN	NaN	NaN	ctcactcactc	9.58	-1	n	NaN	NaN
8	-665	-861	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	n	NaN	NaN
8	-846	-861	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccctctctctc	10.96	-1	n	NaN	NaN
8	-966	-861	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgctcgctc	11.31	-1	n	NaN	NaN
8	-2707	-2887	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctccctctc	10.32	-1	cgaaaggg	9.07	-1
10	-314	-189	NM_080310	ll.31227	gt	NaN	NaN	NaN	ctctctgtctc	9.61	-1	n	NaN	NaN
10	-314	-330	NM_080310	ll.31227	gt	NaN	NaN	NaN	ctctctgtctc	9.61	-1	cgaaaggg	9.07	-1
10	-314	-351	NM_080310	ll.31227	gt	NaN	NaN	NaN	ctctctgtctc	9.61	-1	ggaaaggg	9.07	-1
12	-48	73	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctctctctc	12.50	-1	n	NaN	NaN
12	-2181	-2195	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctttcgctc	10.97	-1	cgaaaggg	9.07	-1
13	-242	-333	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ctcactcactc	9.58	-1	ccctttcc	9.07	1
13	-2106	-2033	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ccctctcgctc	11.16	-1	n	NaN	NaN

188 motifs = 68 220 0 0 thresholds = 9.027 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-103	-145	NM_169233	ll.41032	hb	NaN	NaN	NaN	atttgtttttgctttgcaa	9.43	-1	cggctctcgtgcgc	11.01	-1
1	-1528	-1642	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttaaatcgcttttaaat	10.14	1	gcgaacgctaatcg	10.58	1
2	146	219	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttgcaaaccgaaaacaaaa	9.20	1	acgatcgcgaatcg	9.17	1
5	-1770	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	atttaattattaagcagaa	10.14	-1	gcgaccacaaaacg	11.08	1
6	-4550	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttgtaaataaagaagaa	9.85	-1	gcggtcggaagccg	10.04	1
7	-636	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgaaatttttcataaa	10.58	-1	gcgcacaaaaggcg	11.02	1
9	6686	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	atttatttattattaataa	11.77	-1	gcgtacacaaaacg	10.40	1

189 motifs = 9 225 0 0 thresholds = 7.550 ||9.484 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-4272	-4160	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttactc	7.67	-1	cgcacagagagcgg	11.29	1
5	-738	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttttgtgc	7.90	-1	ccgcctagcgtgcg	10.61	-1
7	98	237	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttttttgg	7.62	-1	ccgctgcccgcgct	10.51	-1
8	2780	2837	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttttttgg	7.62	-1	cgcacgagaagcgg	12.12	1

190 motifs = 34 243 0 0 thresholds = 10.531 ||8.185 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4059	-4221	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaatattttaaaaatt	11.94	-1	aaaatccc	8.29	-1
3	-2577	-2466	NM_079143	ll.38012	kr	NaN	NaN	NaN	aaataatgtttgatattt	12.78	-1	aaaacccc	8.79	-1
4	-1068	-881	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaatatcaaagtcttttt	11.82	1	gaaacccc	8.68	-1
5	-3671	-3575	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaatgtatttttgcatt	12.03	-1	aaaacccc	8.79	-1
8	-3413	-3535	NM_164966	ll.34569	salm	NaN	NaN	NaN	aatttttaaacatatttt	12.51	1	gaaacccc	8.68	-1
8	-3661	-3535	NM_164966	ll.34569	salm	NaN	NaN	NaN	aatttctgttttcttttt	11.58	-1	gaaacccc	8.68	-1
9	2425	2506	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaatagtaaaattatatt	12.13	1	aaaacccc	8.79	-1
11	-3156	-3121	NM_164546	ll.33583	odd	NaN	NaN	NaN	aatataaaaagtgatttt	10.53	1	gaaacccc	8.68	-1

191 motifs = 61 126 0 0 thresholds = 9.840 ||9.280 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	605	719	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	gccgcaactgccgtcg	13.58	-1
6	451	393	NM_078700	ll.33059	run	NaN	NaN	NaN	cactcggccagcag	12.65	-1	gccaccaccgcctccg	11.04	-1
6	-4608	-4622	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gccgcagccgcagtcg	11.39	-1
6	-4608	-4689	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gaagccgctgccgacg	12.96	-1
6	-4608	-4701	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gaagccgctgccgacg	12.96	-1
6	-4608	-4710	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gacgtcgctgccggca	9.33	1
8	4248	4411	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	agttggcagcggcaac	9.96	1
8	4248	4308	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	attgcaactgccagcg	10.14	-1
9	1825	1733	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ccgctgcccaaacg	10.67	1	cggcggcagtgccggc	11.08	1

192 motifs = 182 261 0 0 thresholds = 9.101 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-350	-226	NM_169233	ll.41032	hb	NaN	NaN	NaN	cactctctcgctctgactcgctc	12.67	-1	tcactcag	8.28	1
1	-350	-266	NM_169233	ll.41032	hb	NaN	NaN	NaN	cactctctcgctctgactcgctc	12.67	-1	ctgagtga	8.28	-1
1	-350	-326	NM_169233	ll.41032	hb	NaN	NaN	NaN	cactctctcgctctgactcgctc	12.67	-1	gtgagtga	7.88	-1
2	-326	-287	NM_079463	ll.40287	kni	NaN	NaN	NaN	gagagagagagagagactgagcg	10.48	1	gtgagtga	7.88	-1
2	-326	-434	NM_079463	ll.40287	kni	NaN	NaN	NaN	gagagagagagagagactgagcg	10.48	1	gtgagtga	7.88	-1
3	-705	-611	NM_079143	ll.38012	kr	NaN	NaN	NaN	ctctcgctgtttcattttcgccc	12.58	-1	ctgagtga	8.28	-1
3	-705	-882	NM_079143	ll.38012	kr	NaN	NaN	NaN	ctctcgctgtttcattttcgccc	12.58	-1	ctgagtga	8.28	-1
6	-123	7	NM_078700	ll.33059	run	NaN	NaN	NaN	gggcgggaaagagacggcgctag	14.24	1	ctgagtga	8.28	-1
7	-204	-160	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagagagcgggaaagagagagag	10.20	1	ctgagtgc	7.89	-1
7	-204	-238	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagagagcgggaaagagagagag	10.20	1	ttgagtga	8.87	-1
7	-204	-259	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagagagcgggaaagagagagag	10.20	1	ttgagtgc	8.48	-1
7	-204	-321	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagagagcgggaaagagagagag	10.20	1	ttgagtgc	8.48	-1
7	-204	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gagagagcgggaaagagagagag	10.20	1	ttgagtgc	8.48	-1
8	-371	-342	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcgatttctctcagtgccgcac	10.70	-1	ctgagtgc	7.89	-1
8	-1108	-1090	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcactccctctctctcgctcac	9.18	-1	gtgagtga	7.88	-1

193 motifs = 172 233 0 0 thresholds = 8.804 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2504	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaaaaaaaactaaca	9.14	1	gctaccta	7.73	-1
1	-3563	-3439	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaacgcaaagcacacaaat	10.39	1	gctacctg	8.64	-1
2	519	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	attttctattttttgtttg	11.40	-1	tctacctg	8.68	-1
3	-972	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttttactagttcctttt	9.29	-1	tctacctg	8.68	-1
3	-987	-1012	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttattatatttccttt	11.05	-1	tctacctg	8.68	-1
3	-1019	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttattatatttccttt	11.05	-1	cctaccta	7.98	-1
3	-1253	-1190	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgtttggtttcacttt	11.10	-1	cctaccta	7.98	-1
3	-3152	-3081	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttaaattattgacttg	8.84	-1	tctacctg	8.68	-1
3	-3583	-3430	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttgttttttttttcagttt	9.71	-1	tctacctg	8.68	-1
3	-3583	-3480	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttgttttttttttcagttt	9.71	-1	tctacctg	8.68	-1
4	-2364	-2197	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttccattgtcagttt	10.66	-1	cctaccta	7.98	-1
6	-274	-161	NM_078700	ll.33059	run	NaN	NaN	NaN	caatggaaaaatgggaaat	10.28	1	gctaccta	7.73	-1
6	-589	-722	NM_078700	ll.33059	run	NaN	NaN	NaN	aaattcaaagcgaagaaaa	11.05	1	cctacctg	8.89	-1
7	-1087	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaataaaaaatacaaaaa	9.75	1	cctacctg	8.89	-1
7	-1101	-1261	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaataaaaaatacaaaaa	9.75	1	cctacctg	8.89	-1
8	775	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttctttgattttgcattt	9.56	-1	cctaccta	7.98	-1
8	760	613	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttctttgattttgcattt	9.56	-1	cctaccta	7.98	-1
10	-2052	-2208	NM_080310	ll.31227	gt	NaN	NaN	NaN	gttttttacgttttttttt	9.35	-1	tctacctg	8.68	-1

194 motifs = 160 197 0 0 thresholds = 9.469 ||8.970 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2224	-2345	NM_079463	ll.40287	kni	NaN	NaN	NaN	gggtggatggatggg	10.27	1	caattgccgcc	10.86	-1
4	1065	1109	NM_078946	ll.36039	eve	NaN	NaN	NaN	ccctgccgccgctcc	9.59	-1	tcatggcagcc	9.29	-1
5	-823	-979	NM_079253	ll.38995	h	NaN	NaN	NaN	cccgatcgcccaacc	11.27	-1	cgatagccgcc	8.98	-1
5	-831	-979	NM_079253	ll.38995	h	NaN	NaN	NaN	ggttgggtggttggg	11.82	-1	cgatagccgcc	8.98	-1
5	-839	-979	NM_079253	ll.38995	h	NaN	NaN	NaN	ggttgggtggttggg	11.82	-1	cgatagccgcc	8.98	-1
6	1292	1267	NM_078700	ll.33059	run	NaN	NaN	NaN	ccccaccatcccccc	10.56	-1	ccattgccgcc	10.96	-1

195 motifs = 182 254 0 0 thresholds = 9.101 ||7.784 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1908	-1814	NM_079463	ll.40287	kni	NaN	NaN	NaN	gggcggcaaaaaacttaagccgg	10.36	1	cccgggaa	8.37	-1
4	-535	-339	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctgcctttgcctttttcccgccc	12.82	-1	cccgggaa	8.37	-1
6	-710	-790	NM_078700	ll.33059	run	NaN	NaN	NaN	gtgcctacctgtaccacccgccc	10.45	-1	ctcgggaa	9.03	-1
8	-860	-758	NM_164966	ll.34569	salm	NaN	NaN	NaN	gcccgagagaaagagagagaggg	9.13	1	ctcgggat	8.28	-1
8	-2098	-2026	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccacccccttgtcacatccgccc	11.06	-1	ctcgggaa	9.03	-1
8	-2146	-2026	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctcccatccgatttcgctcgctc	11.73	-1	ctcgggaa	9.03	-1
9	1531	1646	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gagcgggcggaacaggtggagcc	9.28	1	ctcgggaa	9.03	-1

196 motifs = 8 61 0 0 thresholds = 5.654 ||9.840 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3480	-3390	NM_169233	ll.41032	hb	NaN	NaN	NaN	tcaacccttt	6.12	-1	cgatcggaccacag	9.84	-1
5	459	605	NM_079253	ll.38995	h	NaN	NaN	NaN	ttaatccatt	6.16	-1	ccgctgcccaaatg	11.45	1
5	-981	-858	NM_079253	ll.38995	h	NaN	NaN	NaN	ttagcccgtt	6.04	-1	ccactgcccgatcg	10.48	1
5	-4410	-4224	NM_079253	ll.38995	h	NaN	NaN	NaN	ttaacccgtc	6.73	-1	cacttggccagcag	11.38	-1
10	-2217	-2207	NM_080310	ll.31227	gt	NaN	NaN	NaN	gcaacccgtt	6.32	-1	cgttcggccatcag	11.46	-1
12	-1870	-1692	NM_057311	ll.34669	nub	NaN	NaN	NaN	ttaacccatt	7.35	-1	cgactgcccgactg	10.26	1

197 motifs = 84 231 0 0 thresholds = 11.278 ||9.716 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	479	543	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaatcacaattttca	11.28	1	cataaaaa	9.72	-1
7	-3952	-4034	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaaatttattattt	13.03	-1	cataaaaa	9.72	-1
7	-3989	-4034	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaaatttattattt	13.03	-1	cataaaaa	9.72	-1
9	2405	2213	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaattaaaaatttta	12.12	1	cataaaaa	9.72	-1
12	4611	4413	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcaaatttgtgtttt	11.94	-1	cataaaaa	9.72	-1
13	-862	-817	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	taaaacttattattt	12.44	-1	cataaaaa	9.72	-1

198 motifs = 61 161 0 0 thresholds = 9.840 ||9.392 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	605	705	NM_079253	ll.38995	h	NaN	NaN	NaN	ccgctgcccaaatg	11.45	1	gccgcaactgccgtcggcgcgc	11.07	1
5	-858	-844	NM_079253	ll.38995	h	NaN	NaN	NaN	ccactgcccgatcg	10.48	1	caccacccactgcccgatcgcc	10.61	-1
6	451	503	NM_078700	ll.33059	run	NaN	NaN	NaN	cactcggccagcag	12.65	-1	gaacaacaccagctcgagcagc	9.39	-1
6	-4608	-4592	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gccgcagccgcagtcgcagtcg	11.60	1
6	-4608	-4636	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gccgcagccgcagtcgcagtcg	11.60	1
6	-4608	-4678	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gccgctgccgacgtcgctgccg	9.57	1
6	-4608	-4724	NM_078700	ll.33059	run	NaN	NaN	NaN	cagtcggtccgctg	10.46	-1	gccgctgccgacgtcgctgccg	9.57	1
8	4248	4273	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	ggccagcagcagcagcagcacc	9.50	-1
8	4248	4261	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcggccagcag	13.16	-1	ggccagcagcagcagcagcacc	9.50	-1
9	1825	1701	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ccgctgcccaaacg	10.67	1	ggcggcagtgccggcggtaatg	10.98	1

199 motifs = 121 141 0 0 thresholds = 9.671 ||9.669 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-3134	-3312	NM_079463	ll.40287	kni	NaN	NaN	NaN	cgccggccat	9.84	-1	actcaaacacac	10.58	-1
5	-225	-331	NM_079253	ll.38995	h	NaN	NaN	NaN	cagcggcgat	9.67	-1	acgcacacacac	12.76	-1
6	-226	-172	NM_078700	ll.33059	run	NaN	NaN	NaN	cggcggcaat	10.77	-1	acgcacacaggc	10.36	-1
6	-226	-286	NM_078700	ll.33059	run	NaN	NaN	NaN	cggcggcaat	10.77	-1	aaacacacacac	9.78	-1
7	-3486	-3552	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgcggcgat	10.28	-1	acacacacagcc	10.60	-1

200 motifs = 14 95 0 0 thresholds = 6.618 ||10.183 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-411	-391	NM_169233	ll.41032	hb	NaN	NaN	NaN	agagccaaaaaggc	6.66	-1	tcggccaaaatg	10.55	-1
6	409	452	NM_078700	ll.33059	run	NaN	NaN	NaN	atcgccatcaatcc	7.78	-1	tcggccagcagc	11.80	-1
7	1919	2030	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctagccattaacca	6.89	-1	tcggccagagag	10.30	-1
10	-2086	-2206	NM_080310	ll.31227	gt	NaN	NaN	NaN	ggttttatggcctg	7.75	1	tcggccatcagg	11.43	-1
10	-2376	-2206	NM_080310	ll.31227	gt	NaN	NaN	NaN	cagtttatggctcc	6.96	1	tcggccatcagg	11.43	-1

201 motifs = 64 214 0 0 thresholds = 7.766 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1198	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctctgtctgtttt	8.61	-1	tttgcccgctc	10.40	-1
2	-1711	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttttttttt	10.56	-1	ttttgccgccc	10.46	-1
2	-1847	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttctcattttttc	8.06	-1	ttttgccgccc	10.46	-1
2	-1932	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttattatttt	9.10	-1	ttttgccgccc	10.46	-1
4	-340	-535	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctttcgcattttc	10.14	-1	ttttcccgccc	9.90	-1
4	-574	-535	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttcgccgtttt	10.42	-1	ttttcccgccc	9.90	-1
4	-640	-535	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttggccttttt	10.12	-1	ttttcccgccc	9.90	-1
4	-2411	-2236	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttttctttc	8.92	-1	attgcccgctc	9.42	-1
4	-2411	-2534	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttttctttc	8.92	-1	ttgggccgcac	9.83	-1
4	-3552	-3476	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttcttccattttc	9.75	-1	tttggcggcac	10.96	-1
5	669	825	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttcttttttc	9.74	-1	ttgggcggcac	9.83	-1
5	660	825	NM_079253	ll.38995	h	NaN	NaN	NaN	gaaaaaagaaaaa	9.74	1	ttgggcggcac	9.83	-1
6	-535	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctttt	9.19	-1	tttggcggccc	10.92	-1
6	-646	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	gtttcccattttc	8.33	-1	tttggcggccc	10.92	-1
6	-4455	-4532	NM_078700	ll.33059	run	NaN	NaN	NaN	gtttttttttttt	8.02	-1	attggcggcac	9.98	-1
6	-4580	-4532	NM_078700	ll.33059	run	NaN	NaN	NaN	cttttccgctttt	10.27	-1	attggcggcac	9.98	-1
7	-1994	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gttttacattttt	8.49	-1	ttgggcggccc	9.79	-1
8	-852	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	ctctctctctttc	8.92	-1	ttttgcggctc	10.49	-1

202 motifs = 11 153 0 0 thresholds = 7.330 ||9.638 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-4126	-4186	NM_079463	ll.40287	kni	NaN	NaN	NaN	cggataaaccc	8.84	-1	aagcctttcgc	10.35	-1
3	-2466	-2651	NM_079143	ll.38012	kr	NaN	NaN	NaN	tggaaaacccc	8.86	-1	aagcatttccc	9.64	-1
4	-357	-334	NM_078946	ll.36039	eve	NaN	NaN	NaN	cggcaataccc	7.66	-1	aacactttcgc	9.72	-1
5	-4284	-4463	NM_079253	ll.38995	h	NaN	NaN	NaN	cggaaaaactc	8.75	-1	aaccctttcgc	11.20	-1

203 motifs = 222 254 0 0 thresholds = 9.549 ||7.784 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	611	528	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttcgcagcact	10.51	-1	ctcgggaa	9.03	-1
2	-1909	-1814	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttgccgccca	10.64	-1	cccgggaa	8.37	-1
4	-501	-339	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttcccgccct	10.37	-1	cccgggaa	8.37	-1
4	-534	-339	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttttcccgccct	10.37	-1	cccgggaa	8.37	-1
6	-679	-790	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttggcggccct	11.29	-1	ctcgggaa	9.03	-1
7	-2182	-2244	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctttttctgcatt	9.85	-1	cctgggaa	7.88	-1
8	-924	-758	NM_164966	ll.34569	salm	NaN	NaN	NaN	cttttgcggctca	10.81	-1	ctcgggat	8.28	-1

204 motifs = 42 261 0 0 thresholds = 10.229 ||7.876 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3896	-3844	NM_169233	ll.41032	hb	NaN	NaN	NaN	agtattttccaagt	11.48	-1	ctgagtga	8.28	-1
3	-4782	-4939	NM_079143	ll.38012	kr	NaN	NaN	NaN	atattttaccaatt	10.83	-1	ttgagtga	8.87	-1
7	-349	-160	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ctgagtgc	7.89	-1
7	-349	-238	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ttgagtga	8.87	-1
7	-349	-259	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ttgagtgc	8.48	-1
7	-349	-321	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ttgagtgc	8.48	-1
7	-349	-402	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ttgagtgc	8.48	-1
7	-349	-417	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acattttgccaaac	10.48	-1	ttgagtga	8.87	-1
9	3293	3231	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	attattttcaaatt	11.22	-1	ttgagtgc	8.48	-1
13	-4555	-4403	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	aaaattttccaagc	12.00	-1	ctgagtgc	7.89	-1
13	-4555	-4477	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	aaaattttccaagc	12.00	-1	ctgagtgc	7.89	-1

205 motifs = 73 214 0 0 thresholds = 9.213 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1252	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccccaaccgacccccc	9.26	-1	tttgcccgctc	10.40	-1
1	1241	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	atgaggaggggggggg	10.41	-1	tttgcccgctc	10.40	-1
4	-4207	-4152	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccctggccatcccac	10.30	-1	ttgggccgctc	9.83	-1
4	-4309	-4152	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccccaccctgcgcac	11.23	-1	ttgggccgctc	9.83	-1
6	-697	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	cccgcccccgcccccc	9.33	-1	tttggcggccc	10.92	-1
9	1640	1549	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ccctccgcctgcaccc	9.70	-1	attgccggctc	9.42	-1

206 motifs = 21 71 0 0 thresholds = 6.388 ||9.884 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3159	2972	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctaatccc	7.12	-1	gctcgctgctaagctggccatc	9.88	1
1	2944	2972	NM_169233	ll.41032	hb	NaN	NaN	NaN	gtaatccc	6.71	-1	gctcgctgctaagctggccatc	9.88	1
4	-4092	-4199	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctaatccg	6.65	-1	cctggccatcccacaagctagc	10.24	-1
6	1000	881	NM_078700	ll.33059	run	NaN	NaN	NaN	ttaatcca	6.39	-1	gctgaccatcaccattgccacc	10.52	-1
9	-2154	-2091	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttaatccc	7.87	-1	gggggcgctggtggtggccata	12.45	1
9	-2154	-2251	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttaatccc	7.87	-1	tttggccacggattcggccgcc	11.71	-1
9	-3685	-3872	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttaatcca	6.39	-1	gtttgccatggcccttgctttc	12.34	-1
10	-32	77	NM_080310	ll.31227	gt	NaN	NaN	NaN	ttaatcca	6.39	-1	gttggccacgccccttggtttc	13.02	-1

207 motifs = 100 102 0 0 thresholds = 9.655 ||10.493 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2324	-2496	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgaaaccaatttg	9.97	1	tttttgaaaaaaaaaaa	13.00	1
1	-2324	-2510	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgaaaccaatttg	9.97	1	tttttgaaaaaaaaaaa	13.00	1
2	665	728	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcgcgaaaaaaatg	10.54	1	tgttgtgatcataaaaa	11.52	1
7	-404	-485	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	tttttttttttgaaaca	12.89	-1
7	-585	-485	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcacaaaaggcg	11.06	1	tttttttttttgaaaca	12.89	-1
13	-1029	-848	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	catttttcattcgc	9.79	-1	tttttataaaagaaaga	12.27	-1

208 motifs = 192 208 0 0 thresholds = 9.983 ||8.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2258	2202	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggctttgttgctgttgttg	11.18	1	cacccctgccccc	8.78	-1
1	2258	2063	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggctttgttgctgttgttg	11.18	1	cccccccacccca	10.72	-1
1	2054	2202	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggcggtgttggggtggggg	10.90	1	cacccctgccccc	8.78	-1
4	-167	-201	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctgtcgctgccgcagagcc	11.69	-1	cccacccgatcgc	9.19	-1
6	-4636	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgcagccgcagtcgcag	10.57	1	ctccccatccccc	8.97	-1
6	-4681	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgctgccgacgtcgctg	11.75	1	ctccccatccccc	8.97	-1
6	-4724	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgctgccgacgtcgctg	11.75	1	ctccccatccccc	8.97	-1
7	-99	-210	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccgccgctgctgcagtcg	10.09	1	cccgctctctcgc	10.42	-1
8	4437	4524	NM_164966	ll.34569	salm	NaN	NaN	NaN	cggcaacagcaacagcagc	10.29	-1	ccctgccgcccgc	9.11	-1
8	4437	4505	NM_164966	ll.34569	salm	NaN	NaN	NaN	cggcaacagcaacagcagc	10.29	-1	cccccttcccccc	9.18	-1
8	-2606	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgcgctgttgttgttttcg	10.29	1	ctcccccaacccc	9.48	-1
8	-2657	-2576	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgcgctgttgttgttttcg	10.29	1	ctcccccaacccc	9.48	-1
13	-1797	-1931	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caacagcaacaacagcggc	11.10	-1	gcgggagagagcg	9.24	1

209 motifs = 196 220 0 0 thresholds = 9.196 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-2331	-2464	NM_078946	ll.36039	eve	NaN	NaN	NaN	gcagccctcgattcccgc	10.85	-1	cggctcgtggacgc	9.54	-1
5	-2055	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgcctctgccgccgac	10.09	-1	gcgaccacaaaacg	11.08	1
5	-2079	-1918	NM_079253	ll.38995	h	NaN	NaN	NaN	tctgccgacgctgaccgc	10.68	1	gcgaccacaaaacg	11.08	1
6	-4694	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	gccggcagcactgccagc	11.66	1	gcggtcggaagccg	10.04	1
8	-519	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	gttgctcacgaaggcagc	11.51	1	acgtacgcaaaccg	9.72	1
8	-519	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	gttgctcacgaaggcagc	11.51	1	gcgagcgagaggcg	10.64	1

210 motifs = 37 58 0 0 thresholds = 9.679 ||10.008 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-3162	-3075	NM_079143	ll.38012	kr	NaN	NaN	NaN	atttttttaaat	11.04	-1	acctgcaattt	10.72	-1
6	-1493	-1635	NM_078700	ll.33059	run	NaN	NaN	NaN	attattttgaat	10.13	-1	atctgcaatct	10.13	-1
7	-940	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttatttgaat	10.74	-1	atctgcaattt	10.44	-1
8	3700	3646	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcattttaaa	10.50	-1	aactgcaattg	11.28	-1
8	3677	3646	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttaattgaat	9.88	1	aactgcaattg	11.28	-1
8	3667	3646	NM_164966	ll.34569	salm	NaN	NaN	NaN	attcaattaaaa	9.88	-1	aactgcaattg	11.28	-1
8	3566	3646	NM_164966	ll.34569	salm	NaN	NaN	NaN	attaatttcaat	10.35	-1	aactgcaattg	11.28	-1
12	2425	2466	NM_057311	ll.34669	nub	NaN	NaN	NaN	attaatttaaaa	10.78	-1	agcggcaattg	10.07	-1

211 motifs = 84 229 0 0 thresholds = 11.278 ||8.103 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4051	-4138	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaatattttaa	12.23	1	aaaagtaa	8.82	-1
1	-4077	-4138	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaatattttaa	12.23	1	aaaagtaa	8.82	-1
2	479	423	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaatcacaattttca	11.28	1	aaaactaa	8.25	-1
2	-3596	-3635	NM_079463	ll.40287	kni	NaN	NaN	NaN	aaaaaataattttga	12.71	1	aaaagtaa	8.82	-1
7	-2228	-2196	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcaaaatagtgtttt	11.30	-1	aaaagtaa	8.82	-1
8	3690	3727	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaaaaagaactttaa	11.96	1	aaaagtaa	8.82	-1
9	2405	2296	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaattaaaaatttta	12.12	1	aaaactaa	8.25	-1
12	4611	4561	NM_057311	ll.34669	nub	NaN	NaN	NaN	tcaaatttgtgtttt	11.94	-1	aaaagtaa	8.82	-1

212 motifs = 199 222 0 0 thresholds = 8.592 ||9.549 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-436	-501	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccgatctcgctg	10.00	-1	tttttcccgccct	10.37	-1
4	-436	-534	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccgatctcgctg	10.00	-1	tttttcccgccct	10.37	-1
4	-2061	-2217	NM_078946	ll.36039	eve	NaN	NaN	NaN	agcgacctcgctg	8.68	-1	ttttttcggccca	10.16	-1
6	-4695	-4853	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgacgtcgctg	11.34	-1	ttttttctgcgtt	9.55	-1
6	-4707	-4853	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgacgtcgctg	11.34	-1	ttttttctgcgtt	9.55	-1
7	-2099	-2182	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ggctcgctcgctg	8.79	-1	ctttttctgcatt	9.85	-1
8	-776	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtcgcagtcgctg	10.91	-1	cttttgcggctca	10.81	-1
12	-4458	-4370	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctcgccgccgctg	9.12	-1	ctttggctgctca	10.51	-1

213 motifs = 40 58 0 0 thresholds = 10.127 ||10.008 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-3153	-3075	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttaaattattgactt	11.91	-1	acctgcaattt	10.72	-1
6	131	204	NM_078700	ll.33059	run	NaN	NaN	NaN	aaacgaattttttccaa	10.22	1	accggcaattg	10.47	-1
7	-652	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttgaaatttttcataa	11.12	1	atctgcaattt	10.44	-1
7	-891	-765	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	attggaatatttggtaa	11.04	1	atctgcaattt	10.44	-1
12	1650	1458	NM_057311	ll.34669	nub	NaN	NaN	NaN	ataaaaatatttattaa	12.18	1	aactgcaatct	10.47	-1

214 motifs = 31 214 0 0 thresholds = 9.075 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1076	1188	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctcacacacatgcacacac	10.84	-1	tttgcccgctc	10.40	-1
4	1635	1659	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctgtcccgctcgcacctgc	10.37	-1	attggccgctc	9.98	-1
6	-509	-678	NM_078700	ll.33059	run	NaN	NaN	NaN	ctctctcgctctggctctc	10.33	-1	tttggcggccc	10.92	-1
7	-2157	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ccgccccacacacacccac	12.62	-1	ttgggcggccc	9.79	-1
8	-852	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagagaaagagagagaggg	9.51	1	ttttgcggctc	10.49	-1
8	-970	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	gagagagcgagcgagatgg	12.64	1	ttttgcggctc	10.49	-1
8	-1098	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	cactcactcactccctctc	12.93	-1	ttttgcggctc	10.49	-1

215 motifs = 163 205 0 0 thresholds = 8.570 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2950	2981	NM_169233	ll.41032	hb	NaN	NaN	NaN	gaaaaccggtggaaaattcgcagc	11.40	1	gcagctcgctgcta	10.55	-1
5	-209	-146	NM_079253	ll.38995	h	NaN	NaN	NaN	gcggcgatttagcctacgaacctg	11.13	-1	gctacgctccgcaa	9.54	-1
5	-209	-229	NM_079253	ll.38995	h	NaN	NaN	NaN	gcggcgatttagcctacgaacctg	11.13	-1	gcgtctcgcagcgg	9.87	-1
6	530	633	NM_078700	ll.33059	run	NaN	NaN	NaN	gccaccaccagtccgcagaactcc	9.49	-1	ctgcagcgccctgc	9.78	1
6	-2321	-2439	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgccacctcggaaaactcgcggg	10.24	1	cagctgagagcggc	10.53	1
6	-2321	-2519	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgccacctcggaaaactcgcggg	10.24	1	tcgcagcgagcggc	11.77	1
6	-2362	-2439	NM_078700	ll.33059	run	NaN	NaN	NaN	cctaccagaatggccatgctcccc	9.21	-1	cagctgagagcggc	10.53	1
6	-2362	-2519	NM_078700	ll.33059	run	NaN	NaN	NaN	cctaccagaatggccatgctcccc	9.21	-1	tcgcagcgagcggc	11.77	1
6	-3939	-3808	NM_078700	ll.33059	run	NaN	NaN	NaN	gagaggcggagccacgatcggcgc	9.07	1	gccgatctctgcgg	11.04	-1
7	-1959	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcggcccacctgccacgggcccac	12.43	-1	ccgctgtgagtggc	10.37	1
12	-4479	-4531	NM_057311	ll.34669	nub	NaN	NaN	NaN	ccccctcgccgccgctgccgctgc	10.27	1	gcaaatcacagcag	9.44	-1

216 motifs = 196 260 0 0 thresholds = 9.196 ||6.901 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2505	2593	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctgccagatagcacagc	10.06	-1	acaattag	6.90	-1
2	-2055	-2026	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtgggtacctaagccagc	9.89	1	gcgattag	8.17	-1
4	1673	1600	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctcccagcgacggcggc	10.04	-1	acgattag	8.76	-1
6	-1856	-1771	NM_078700	ll.33059	run	NaN	NaN	NaN	tcggcgatcgcaggcagc	12.35	1	gcgattag	8.17	-1
6	-1856	-2032	NM_078700	ll.33059	run	NaN	NaN	NaN	tcggcgatcgcaggcagc	12.35	1	gtgattag	7.59	-1
12	3269	3415	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgccgccgacgacgac	9.60	-1	acaattag	6.90	-1

217 motifs = 212 213 0 0 thresholds = 8.953 ||9.703 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-2012	-2170	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttggtctttacttttaacttttt	9.50	-1	aacagaaacccaatc	11.90	-1
3	-2031	-2170	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttggtctttacttttaacttttt	9.50	-1	aacagaaacccaatc	11.90	-1
4	-4612	-4676	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaaaattgggttcactgtatataaaa	9.93	1	gattgcgtttgagct	10.62	1
4	-4645	-4676	NM_078946	ll.36039	eve	NaN	NaN	NaN	tttgagctacgttacttacatttttc	10.75	-1	gattgcgtttgagct	10.62	1
5	998	881	NM_079253	ll.38995	h	NaN	NaN	NaN	aaaaactgacttcatgcgagtccaaa	9.58	1	gattcggatttggct	11.60	1
6	-4867	-4901	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaaaacacccccagaacgcagaaaa	10.62	1	acccgaaacacactc	10.90	-1
6	-4932	-4901	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttctttttaccttttccttttttt	14.50	-1	acccgaaacacactc	10.90	-1
6	-4949	-4901	NM_078700	ll.33059	run	NaN	NaN	NaN	gaataaaaaaaaaaagaaaaccaaaa	10.15	1	acccgaaacacactc	10.90	-1
8	4923	4790	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttgagaatgttgttttctgtttttt	9.69	-1	atcaaaatcataatc	11.95	-1
9	4796	4769	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttgttgcggcttgttacttttttt	11.30	-1	gattttgttgcggct	9.91	1
11	-2575	-2541	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttcaggtctttccaaattatttttt	11.91	-1	gatttggtttccgtt	10.49	1
11	-2736	-2541	NM_164546	ll.33583	odd	NaN	NaN	NaN	tttgtacttcgattttcgattttttt	12.47	-1	gatttggtttccgtt	10.49	1

218 motifs = 141 171 0 0 thresholds = 9.669 ||8.997 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-3312	-3141	NM_079463	ll.40287	kni	NaN	NaN	NaN	actcaaacacac	10.58	-1	gccggccatcaaagg	9.88	1
4	1230	1361	NM_078946	ll.36039	eve	NaN	NaN	NaN	atacacacactc	11.29	-1	gcgggcgggcgagac	9.16	1
7	956	1089	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atacacacaccc	10.78	-1	gctgctcgccaaaag	10.83	1
7	-2157	-1978	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	acacacacccac	9.81	-1	cggtcgttgggcggc	9.43	-1
8	-533	-506	NM_164966	ll.34569	salm	NaN	NaN	NaN	acacacacacac	13.40	-1	gcagccgaacaaagc	10.57	1
8	-533	-715	NM_164966	ll.34569	salm	NaN	NaN	NaN	acacacacacac	13.40	-1	gcgggccggcaagag	10.06	1
8	-607	-506	NM_164966	ll.34569	salm	NaN	NaN	NaN	actcacacacgc	11.90	-1	gcagccgaacaaagc	10.57	1
8	-607	-715	NM_164966	ll.34569	salm	NaN	NaN	NaN	actcacacacgc	11.90	-1	gcgggccggcaagag	10.06	1
8	-1102	-1035	NM_164966	ll.34569	salm	NaN	NaN	NaN	actcactcactc	9.67	-1	gcaggctgccaaggg	9.74	1
13	-1949	-1961	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	gggtgagtgtgt	10.12	1	cgattggctgccggc	10.03	-1

219 motifs = 159 222 0 0 thresholds = 8.410 ||9.549 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	575	605	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttgttttgg	11.76	-1	ttttcgcagctct	10.29	-1
4	-2029	-2217	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttgttttgg	11.76	-1	ttttttcggccca	10.16	-1
5	-4200	-4174	NM_079253	ll.38995	h	NaN	NaN	NaN	tctggttttgg	8.77	-1	ctttgccggctca	9.96	-1
6	-610	-679	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttcttttgg	8.46	-1	ttttggcggccct	11.29	-1
6	-4669	-4853	NM_078700	ll.33059	run	NaN	NaN	NaN	tgttgttttgg	9.77	-1	ttttttctgcgtt	9.55	-1
8	2631	2524	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttgtgctttgg	8.82	-1	tttttgctgcgtt	10.27	-1
10	-2563	-2611	NM_080310	ll.31227	gt	NaN	NaN	NaN	tttggatttgg	10.71	-1	ctttcgcggccct	10.49	-1

220 motifs = 170 188 0 0 thresholds = 8.294 ||8.817 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2044	-2034	NM_079463	ll.40287	kni	NaN	NaN	NaN	agccagcgatttcg	9.64	1	ccagcgattt	10.14	-1
3	-14	-4	NM_079143	ll.38012	kr	NaN	NaN	NaN	acgcagcgaatttg	9.58	1	gcagcgaatt	9.65	-1
4	-1499	-1337	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgatttcgctgcct	10.76	-1	gcagctaatt	9.05	-1
4	-1499	-1454	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgatttcgctgcct	10.76	-1	gcagcgattt	10.43	-1
8	1876	2026	NM_164966	ll.34569	salm	NaN	NaN	NaN	cacactcgctgttt	11.55	-1	gcagcgattt	10.43	-1
8	-668	-684	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgagagcgagcgag	9.49	1	acagcaattt	9.03	-1
8	-779	-684	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaacagcgactgcg	11.09	1	acagcaattt	9.03	-1
8	-849	-684	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagagagggag	9.21	1	acagcaattt	9.03	-1
8	-2592	-2778	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgctgtcgctgtgt	11.28	-1	ccagctattt	9.53	-1
9	-2414	-2569	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaacagcgggtgag	8.38	1	gcagcaattt	9.41	-1

221 motifs = 184 194 0 0 thresholds = 7.532 ||9.307 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2281	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttttgtgcca	9.50	-1	ttgcctggctgcac	10.63	-1
1	2020	2137	NM_169233	ll.41032	hb	NaN	NaN	NaN	atttttgcca	8.58	-1	ttgcctggctgcac	10.63	-1
2	-2063	-1901	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttaggcca	8.11	-1	ttgctgggcggcaa	10.96	-1
5	-2206	-2027	NM_079253	ll.38995	h	NaN	NaN	NaN	tttttggcca	11.20	-1	ttgatcggctgcca	10.54	-1
6	-2245	-2256	NM_078700	ll.33059	run	NaN	NaN	NaN	tttttggcca	11.20	-1	ttggtgggccgcaa	10.30	-1
8	-321	-508	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttggcga	8.68	-1	aggcagccgaacaa	9.44	1
9	2397	2577	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttttacca	8.86	-1	tcgctggccgccaa	9.97	1
9	-72	-97	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttttcgcca	8.50	-1	gggcagcccgtcga	9.75	1

222 motifs = 42 254 0 0 thresholds = 10.229 ||7.784 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1238	-1331	NM_169233	ll.41032	hb	NaN	NaN	NaN	gttttgtaaatatt	11.17	1	ctcgggaa	9.03	-1
5	-1375	-1514	NM_079253	ll.38995	h	NaN	NaN	NaN	attttgtaaataat	11.44	1	cttgggaa	8.53	-1
6	-979	-790	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaattttccaaac	11.71	-1	ctcgggaa	9.03	-1
12	-1135	-1214	NM_057311	ll.34669	nub	NaN	NaN	NaN	agattttaccaagt	10.93	-1	ctcgggaa	9.03	-1

223 motifs = 100 248 0 0 thresholds = 9.655 ||8.379 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-4307	-4503	NM_169233	ll.41032	hb	NaN	NaN	NaN	cgaattcatttcgc	11.02	-1	ccgctcac	9.24	-1
4	-4287	-4154	NM_078946	ll.36039	eve	NaN	NaN	NaN	caatttctgctcgc	9.82	-1	ccgctctc	8.71	-1
7	-404	-206	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gcgcactcaaaatg	9.82	1	ccgctctc	8.71	-1
9	3022	2874	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gcgcgcagaagtcg	10.26	1	ccgctctc	8.71	-1

224 motifs = 183 203 0 0 thresholds = 8.369 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2220	2046	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccatgcccctgcc	10.19	-1	aaaaagggggcggtg	10.90	1
1	-279	-417	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctttccccatccc	8.59	-1	aaaaaggcagctgca	9.63	1
6	-69	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	cgacggctctgcc	8.77	-1	caaacgccggcagag	11.50	1
6	-4595	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgccgcgctgcc	8.54	-1	cactgctgccttttg	12.08	-1
6	-4753	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccatccccctccc	10.62	-1	cactgctgccttttg	12.08	-1
6	-4761	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	gggagggggatgg	10.62	1	cactgctgccttttg	12.08	-1
7	231	215	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctgccgctctgcc	8.43	-1	ctctgccgccgtttc	10.36	-1
8	-1110	-930	NM_164966	ll.34569	salm	NaN	NaN	NaN	cactccctctctc	8.65	-1	caaaggtgagccgca	9.86	1
9	2874	2955	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	cgttgccgctctc	8.80	-1	caaaaggcagcaaag	9.50	1

225 motifs = 186 220 0 0 thresholds = 8.684 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-2337	-2464	NM_078946	ll.36039	eve	NaN	NaN	NaN	tctcgcagccctcgat	11.19	-1	cggctcgtggacgc	9.54	-1
5	-968	-800	NM_079253	ll.38995	h	NaN	NaN	NaN	gttggcggctatcgat	11.01	-1	cgcctagcgtgcgc	10.43	-1
8	-409	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	aacgttcgcagcgagc	10.66	1	acgtacgcaaaccg	9.72	1
8	-461	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	tctggcggctgttatt	9.91	-1	acgtacgcaaaccg	9.72	1
9	2852	3022	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gctggcagcccaagtg	9.22	-1	gcgcgcagaagtcg	9.28	1

226 motifs = 169 214 0 0 thresholds = 9.235 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1749	1659	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctgtgaccgccgc	9.98	-1	attggccgctc	9.98	-1
6	-3057	-2874	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgtggcggcggc	9.37	-1	ttttgcggccc	10.46	-1
6	-4601	-4532	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgccgc	11.92	-1	attggcggcac	9.98	-1
8	-774	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcgcagtcgc	9.24	-1	ttttgcggctc	10.49	-1
9	1732	1549	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ccgttgccgccgc	12.05	-1	attgccggctc	9.42	-1

227 motifs = 163 212 0 0 thresholds = 8.570 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1289	1348	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcaacgcccctggccacgcccccc	10.39	-1	tgtcgactttcatgttgttttttttt	9.37	-1
1	1289	1200	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcaacgcccctggccacgcccccc	10.39	-1	ttttttgcccgctctgtctgtttttg	10.45	-1
1	1289	1114	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcaacgcccctggccacgcccccc	10.39	-1	caaaaattctaaaacaatattttaaa	11.28	1
2	-520	-606	NM_079463	ll.40287	kni	NaN	NaN	NaN	gcagccaaaacggctccgcccatg	9.63	-1	aaaaaccggcggactttgaaaagaaa	10.47	1
4	-2146	-2015	NM_078946	ll.36039	eve	NaN	NaN	NaN	gtgcaccttcggcggaaccgcagg	10.61	1	ttttttgttttggccgaccgattttt	10.45	-1
5	915	998	NM_079253	ll.38995	h	NaN	NaN	NaN	gcagccaccacgcgacgcacgcgc	8.76	-1	aaaaactgacttcatgcgagtccaaa	9.58	1
6	-695	-591	NM_078700	ll.33059	run	NaN	NaN	NaN	cgaacccctccgcaggagggccgc	11.10	1	aaaaaataaaattcaaagcgaagaaa	12.31	1
6	-3939	-4042	NM_078700	ll.33059	run	NaN	NaN	NaN	gagaggcggagccacgatcggcgc	9.07	1	ttttccgctctctgtcggtaattttt	10.35	-1
6	-4716	-4867	NM_078700	ll.33059	run	NaN	NaN	NaN	gcagcgacgtcggcagcggcttcc	8.90	-1	aaaaaacacccccagaacgcagaaaa	10.62	1
7	217	108	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgccgctctgccgccgtttctg	12.79	-1	ccaaaaaaaaaaaaatagaaaacaaa	11.27	1
8	-1032	-1193	NM_164966	ll.34569	salm	NaN	NaN	NaN	ggctgccaagggctcgttggcggg	8.57	1	caaaatcttataaaccgaaattaaaa	11.34	1

228 motifs = 170 240 0 0 thresholds = 8.294 ||7.209 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	856	929	NM_079463	ll.40287	kni	NaN	NaN	NaN	tcacagcgatcgtg	8.29	1	gttagtgt	7.37	-1
6	-288	-327	NM_078700	ll.33059	run	NaN	NaN	NaN	acacagagagaccg	9.07	1	gttagtgt	7.37	-1
6	-423	-327	NM_078700	ll.33059	run	NaN	NaN	NaN	cactctctctctct	9.81	-1	gttagtgt	7.37	-1
7	-1525	-1691	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	cgcactcgctgtat	11.07	-1	gttactta	7.80	-1
8	-2592	-2556	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgctgtcgctgtgt	11.28	-1	gttagtgt	7.37	-1
11	-2361	-2404	NM_164546	ll.33583	odd	NaN	NaN	NaN	agtcagccagtgcg	8.64	1	gttactat	7.30	-1
12	-49	-178	NM_057311	ll.34669	nub	NaN	NaN	NaN	ctctctctctctct	9.81	-1	gttagttt	8.30	-1
12	-158	-178	NM_057311	ll.34669	nub	NaN	NaN	NaN	agagagcgagagcg	12.16	1	gttagttt	8.30	-1

229 motifs = 87 265 0 0 thresholds = 9.586 ||7.455 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-539	-668	NM_079463	ll.40287	kni	NaN	NaN	NaN	gccgttttggc	10.72	-1	tttcccgc	8.23	-1
8	4174	4360	NM_164966	ll.34569	salm	NaN	NaN	NaN	gccgtttggcc	10.57	-1	tttccctc	9.22	-1
9	3164	3255	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gccgtttgggc	11.67	-1	tttcccta	8.22	-1
10	-241	-360	NM_080310	ll.31227	gt	NaN	NaN	NaN	gccctttggcc	10.16	-1	tttccctc	9.22	-1

230 motifs = 233 265 0 0 thresholds = 7.728 ||7.455 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3439	-3531	NM_169233	ll.41032	hb	NaN	NaN	NaN	gctacctg	8.64	-1	tttccctc	9.22	-1
2	646	470	NM_079463	ll.40287	kni	NaN	NaN	NaN	tctacctg	8.68	-1	tttcccgc	8.23	-1
6	-161	-121	NM_078700	ll.33059	run	NaN	NaN	NaN	gctaccta	7.73	-1	tttcccgc	8.23	-1
10	-224	-360	NM_080310	ll.31227	gt	NaN	NaN	NaN	cctacctg	8.89	-1	tttccctc	9.22	-1
11	-4084	-4270	NM_164546	ll.33583	odd	NaN	NaN	NaN	gctacctg	8.64	-1	attccctc	7.46	-1

231 motifs = 204 225 0 0 thresholds = 7.942 ||9.484 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-75	-7	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttgagttctttttt	7.97	-1	ccgctgagcgtgag	10.92	-1
4	-2447	-2537	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttgtggcctctttt	9.14	-1	cgcacaaagagcgg	11.20	1
4	-3961	-4160	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaaaacgggcacaa	10.10	1	cgcacagagagcgg	11.29	1
5	-780	-801	NM_079253	ll.38995	h	NaN	NaN	NaN	ttgtgatcttgttt	9.34	-1	ccgcctagcgtgcg	10.61	-1
6	-4457	-4600	NM_078700	ll.33059	run	NaN	NaN	NaN	ttgttttttttttt	9.07	-1	ccgctgccgccgcg	9.63	-1
7	-463	-322	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaaaagtcaaat	9.46	1	agcactcaaagcgg	10.14	1
7	-463	-584	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaaaaagtcaaat	9.46	1	cgcacaaaaggcgg	10.28	1

232 motifs = 168 171 0 0 thresholds = 8.465 ||8.997 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	-2204	-2029	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttggccagc	11.21	-1	cttttgatcggctgc	10.67	-1
6	-2243	-2258	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttggccagt	10.42	-1	gttttggtgggccgc	10.85	-1
7	1245	1089	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tgttggccatc	9.25	-1	gctgctcgccaaaag	10.83	1
8	-319	-506	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttggcgagt	9.99	-1	gcagccgaacaaagc	10.57	1
9	-277	-95	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttggggaat	8.97	-1	gcagcccgtcgagcg	9.10	1

233 motifs = 144 177 0 0 thresholds = 9.481 ||8.297 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1997	-2123	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttcgcatctccc	9.61	-1	tgcgccaaatcaaaa	9.33	1
2	612	595	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttcgcagcactc	11.11	-1	tttttttagggaaca	9.84	-1
3	604	571	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttcgcagctctc	11.33	-1	tcgaccaaaacaaaa	10.28	1
8	2025	1894	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttcgcagcgatt	10.61	-1	tctttttttagctta	8.76	-1

234 motifs = 45 233 0 0 thresholds = 9.535 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
6	-48	-161	NM_078700	ll.33059	run	NaN	NaN	NaN	gctgctcgcc	9.63	-1	gctaccta	7.73	-1
10	-208	-224	NM_080310	ll.31227	gt	NaN	NaN	NaN	gcggccagcc	9.94	-1	cctacctg	8.89	-1
11	-70	-149	NM_164546	ll.33583	odd	NaN	NaN	NaN	gccgctcgcc	10.01	-1	cctacctg	8.89	-1
12	3548	3747	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcggccaccc	9.54	-1	tctaccta	7.77	-1

235 motifs = 169 203 0 0 thresholds = 9.235 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2347	-2483	NM_079463	ll.40287	kni	NaN	NaN	NaN	caattgccgccgc	11.27	-1	aaaaagtcagcgcag	10.54	1
4	-173	-105	NM_078946	ll.36039	eve	NaN	NaN	NaN	ctgtcgctgccgc	11.23	-1	caaaggccggcggag	12.05	1
6	-235	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	ccattgccgccgc	11.07	-1	caaacgccggcagag	11.50	1
6	-4601	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgccgc	11.92	-1	cactgctgccttttg	12.08	-1
8	-774	-930	NM_164966	ll.34569	salm	NaN	NaN	NaN	cagtcgcagtcgc	9.24	-1	caaaggtgagccgca	9.86	1

236 motifs = 237 270 0 0 thresholds = 7.478 ||7.035 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	1555	1377	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcgagcgt	8.16	-1	taaccccttc	8.36	-1
2	-4148	-4029	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtgagcgg	9.02	-1	caaccccttt	7.36	-1
2	-4148	-4184	NM_079463	ll.40287	kni	NaN	NaN	NaN	gtgagcgg	9.02	-1	taagcctttc	7.61	-1
5	-4541	-4465	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgagcgt	8.16	-1	gaaccctttc	7.30	-1
5	-4541	-4571	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgagcgt	8.16	-1	taatcctttc	8.21	-1
5	-4541	-4593	NM_079253	ll.38995	h	NaN	NaN	NaN	gcgagcgt	8.16	-1	taatcctttc	8.21	-1
8	-4168	-4009	NM_164966	ll.34569	salm	NaN	NaN	NaN	gtgagcgg	9.02	-1	taatcctttt	8.87	-1
9	6490	6435	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gcgagcgt	8.16	-1	taaccctttg	9.18	-1
11	-4270	-4451	NM_164546	ll.33583	odd	NaN	NaN	NaN	gtgagcga	7.48	-1	caaccctttt	8.65	-1

237 motifs = 34 195 0 0 thresholds = 10.531 ||9.193 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2244	2268	NM_169233	ll.41032	hb	NaN	NaN	NaN	aatattaattttacactt	11.86	-1	tggctttgttgct	9.20	-1
6	975	904	NM_078700	ll.33059	run	NaN	NaN	NaN	aaagtgagttttttagtt	11.81	-1	tggctttgctgta	10.00	-1
7	-460	-626	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaaagtcaaatataaatt	11.97	1	tggaattgctgtt	10.89	-1
8	1300	1441	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaatcataaacacttttt	12.60	1	tgttgttgctgca	9.68	-1
9	-4560	-4372	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aataaaattttacgactt	10.69	-1	tgcagttgcagtt	9.56	-1

238 motifs = 170 222 0 0 thresholds = 8.294 ||9.549 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2044	-1909	NM_079463	ll.40287	kni	NaN	NaN	NaN	agccagcgatttcg	9.64	1	tttttgccgccca	10.64	-1
4	-439	-501	NM_078946	ll.36039	eve	NaN	NaN	NaN	aatcagcgagatcg	10.81	1	tttttcccgccct	10.37	-1
4	-439	-534	NM_078946	ll.36039	eve	NaN	NaN	NaN	aatcagcgagatcg	10.81	1	tttttcccgccct	10.37	-1
4	-2058	-2217	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgacctcgctgcat	9.48	-1	ttttttcggccca	10.16	-1
6	-1845	-1949	NM_078700	ll.33059	run	NaN	NaN	NaN	aggcagcgaaaatg	9.41	1	ctttggctgccta	9.74	-1
7	-2096	-2182	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcgctcgctggtt	10.66	-1	ctttttctgcatt	9.85	-1
8	-779	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaacagcgactgcg	11.09	1	cttttgcggctca	10.81	-1
8	-849	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagagagggag	9.21	1	cttttgcggctca	10.81	-1
8	-969	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagcgagcgag	11.24	1	cttttgcggctca	10.81	-1
8	-1093	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagggagtgag	8.30	1	cttttgcggctca	10.81	-1
8	-1109	-924	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagggagtgag	8.30	1	cttttgcggctca	10.81	-1

239 motifs = 150 231 0 0 thresholds = 10.260 ||9.716 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1670	-1732	NM_079463	ll.40287	kni	NaN	NaN	NaN	ccaccttttt	10.84	-1	cataaaaa	9.72	-1
2	-1703	-1732	NM_079463	ll.40287	kni	NaN	NaN	NaN	ccaccgtttt	10.45	-1	cataaaaa	9.72	-1
5	-3835	-3734	NM_079253	ll.38995	h	NaN	NaN	NaN	cccccttttt	10.65	-1	cataaaaa	9.72	-1
6	-2878	-2842	NM_078700	ll.33059	run	NaN	NaN	NaN	cccacttttt	10.46	-1	cataaaaa	9.72	-1
8	-3983	-4075	NM_164966	ll.34569	salm	NaN	NaN	NaN	cccccttttt	10.65	-1	cataaaaa	9.72	-1

240 motifs = 171 262 0 0 thresholds = 8.997 ||8.234 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
6	452	422	NM_078700	ll.33059	run	NaN	NaN	NaN	cactcggccagcagc	9.37	-1	gttggcca	8.93	-1
7	1089	1243	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgctcgccaaaag	10.83	1	gttggcca	8.93	-1
10	-1132	-1084	NM_080310	ll.31227	gt	NaN	NaN	NaN	gctggtcagcaaaag	9.28	1	gatggcta	8.23	-1
12	-1714	-1583	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctggccgacaaaac	9.87	1	gatggcta	8.23	-1
13	-1961	-2049	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	cgattggctgccggc	10.03	-1	tggccaac	8.93	1

241 motifs = 68 87 0 0 thresholds = 9.027 ||9.586 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1716	-1578	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttttttatggtgtgagaaa	9.78	-1	gccttttgtgc	10.78	-1
4	-4484	-4465	NM_078946	ll.36039	eve	NaN	NaN	NaN	atttatttctacatataaa	9.77	-1	gccatttggac	10.19	-1
4	-4500	-4465	NM_078946	ll.36039	eve	NaN	NaN	NaN	atttatttctacatataaa	9.77	-1	gccatttggac	10.19	-1
7	-636	-583	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atttgaaatttttcataaa	10.58	-1	gccttttgtgc	10.78	-1
8	3980	4174	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttattatatatatcgaa	10.52	-1	gccgtttggcc	10.57	-1
9	3343	3164	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tttttttaattgttcgaaa	10.16	-1	gccgtttgggc	11.67	-1

242 motifs = 126 208 0 0 thresholds = 9.280 ||8.478 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-263	-201	NM_078946	ll.36039	eve	NaN	NaN	NaN	ggtacttccgccggcg	9.54	-1	cccacccgatcgc	9.19	-1
5	719	865	NM_079253	ll.38995	h	NaN	NaN	NaN	gccgcaactgccgtcg	13.58	-1	cccaccagctccc	9.17	-1
6	-4622	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgcagccgcagtcg	11.39	-1	ctccccatccccc	8.97	-1
6	-4689	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gaagccgctgccgacg	12.96	-1	ctccccatccccc	8.97	-1
6	-4701	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gaagccgctgccgacg	12.96	-1	ctccccatccccc	8.97	-1
6	-4710	-4749	NM_078700	ll.33059	run	NaN	NaN	NaN	gacgtcgctgccggca	9.33	1	ctccccatccccc	8.97	-1
7	-85	-210	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gccgctgctgcagtcg	10.91	-1	cccgctctctcgc	10.42	-1
8	4411	4524	NM_164966	ll.34569	salm	NaN	NaN	NaN	agttggcagcggcaac	9.96	1	ccctgccgcccgc	9.11	-1
8	4411	4505	NM_164966	ll.34569	salm	NaN	NaN	NaN	agttggcagcggcaac	9.96	1	cccccttcccccc	9.18	-1
8	4308	4505	NM_164966	ll.34569	salm	NaN	NaN	NaN	attgcaactgccagcg	10.14	-1	cccccttcccccc	9.18	-1
12	-4452	-4472	NM_057311	ll.34669	nub	NaN	NaN	NaN	gccgccgctgccgctg	11.40	-1	cactccccctcgc	9.16	-1

243 motifs = 88 249 0 0 thresholds = 9.584 ||7.245 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1192	-1066	NM_169233	ll.41032	hb	NaN	NaN	NaN	ctgccaacgc	9.82	-1	aattaagt	8.69	-1
5	-4317	-4303	NM_079253	ll.38995	h	NaN	NaN	NaN	cttccagcga	10.11	-1	agttaagt	8.88	-1
8	-4128	-4241	NM_164966	ll.34569	salm	NaN	NaN	NaN	cggccagcga	10.19	-1	n	NaN	NaN
13	-4387	-4218	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttgccaacga	9.63	-1	n	NaN	NaN

244 motifs = 170 214 0 0 thresholds = 8.294 ||9.417 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-2044	-1908	NM_079463	ll.40287	kni	NaN	NaN	NaN	agccagcgatttcg	9.64	1	ttttgccgccc	10.46	-1
4	-439	-535	NM_078946	ll.36039	eve	NaN	NaN	NaN	aatcagcgagatcg	10.81	1	ttttcccgccc	9.90	-1
4	-2058	-2236	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgacctcgctgcat	9.48	-1	attgcccgctc	9.42	-1
7	-2096	-1976	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ctcgctcgctggtt	10.66	-1	ttgggcggccc	9.79	-1
8	-779	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	aaacagcgactgcg	11.09	1	ttttgcggctc	10.49	-1
8	-849	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagagagggag	9.21	1	ttttgcggctc	10.49	-1
8	-969	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagcgagcgag	11.24	1	ttttgcggctc	10.49	-1
8	-1093	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagggagtgag	8.30	1	ttttgcggctc	10.49	-1
8	-1109	-923	NM_164966	ll.34569	salm	NaN	NaN	NaN	agagagggagtgag	8.30	1	ttttgcggctc	10.49	-1

245 motifs = 222 260 0 0 thresholds = 9.549 ||6.901 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-1909	-2026	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttttgccgccca	10.64	-1	gcgattag	8.17	-1
3	-2025	-1865	NM_079143	ll.38012	kr	NaN	NaN	NaN	ttttttccgcttt	9.70	-1	gcgattag	8.17	-1
6	-1949	-1771	NM_078700	ll.33059	run	NaN	NaN	NaN	ctttggctgccta	9.74	-1	gcgattag	8.17	-1
6	-1949	-2032	NM_078700	ll.33059	run	NaN	NaN	NaN	ctttggctgccta	9.74	-1	gtgattag	7.59	-1
7	-2587	-2752	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	ttttgtcagcatt	9.74	-1	acaattag	6.90	-1
8	2524	2329	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttttgctgcgtt	10.27	-1	atgattag	8.19	-1

246 motifs = 196 205 0 0 thresholds = 9.196 ||9.121 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	1673	1715	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctcccagcgacggcggc	10.04	-1	ctgcagagcgcagc	10.88	1
4	-163	-175	NM_078946	ll.36039	eve	NaN	NaN	NaN	gctgccgcagagcctcgc	10.14	-1	ccgcagagcctcgc	9.17	1
6	445	633	NM_078700	ll.33059	run	NaN	NaN	NaN	gccagcagcacgggcagc	11.15	1	ctgcagcgccctgc	9.78	1
6	-6	-52	NM_078700	ll.33059	run	NaN	NaN	NaN	actgccaacgatcgcagc	11.54	-1	aggcggcgagcagc	9.12	1
6	-63	-52	NM_078700	ll.33059	run	NaN	NaN	NaN	gccgtcgacagaggcggc	9.56	1	aggcggcgagcagc	9.12	1
7	-1894	-1906	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	gctgagtacctgggcagc	10.33	1	ccgctgtgagtggc	10.37	1
12	-4450	-4531	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctgccgctgcttgcgga	11.06	-1	gcaaatcacagcag	9.44	-1

247 motifs = 87 267 0 0 thresholds = 9.586 ||6.401 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-420	-450	NM_169233	ll.41032	hb	NaN	NaN	NaN	gcctttttggc	10.78	-1	ccgcttca	6.52	-1
4	-4465	-4448	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccatttggac	10.19	-1	ccgcttaa	6.40	-1
10	-241	-209	NM_080310	ll.31227	gt	NaN	NaN	NaN	gccctttggcc	10.16	-1	ccgcttcg	6.67	-1
12	3866	3845	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcccttttggc	10.32	-1	ccgcttaa	6.40	-1

248 motifs = 147 220 0 0 thresholds = 9.707 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3153	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	cttcccgtcacctctgcccatct	9.72	-1	gcggccacgaaacg	10.44	1
5	-817	-800	NM_079253	ll.38995	h	NaN	NaN	NaN	cacccaaccacccaaccacccac	10.75	-1	cgcctagcgtgcgc	10.43	-1
6	-4758	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	ggatggggaggagcggtcggaag	9.72	1	gcggtcggaagccg	10.04	1
8	-3538	-3606	NM_164966	ll.34569	salm	NaN	NaN	NaN	gaaggggtttcagaattggggtg	9.86	1	gagaccgcaaagcg	10.55	1

249 motifs = 201 203 0 0 thresholds = 8.916 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
4	-168	-105	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgctgccgcagagc	10.35	-1	caaaggccggcggag	12.05	1
4	-1493	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgctgccttccttg	9.57	-1	cactgctctcgtttt	10.63	-1
4	-1775	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	tcgctgcgctagttt	9.02	-1	cactgctctcgtttt	10.63	-1
6	-2525	-2495	NM_078700	ll.33059	run	NaN	NaN	NaN	ggtccttcgcagcga	10.91	1	caaaaggcagcgctg	10.84	1
6	-4599	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgccgcgc	9.61	-1	cactgctgccttttg	12.08	-1
6	-4698	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgacgtcg	10.18	-1	cactgctgccttttg	12.08	-1
6	-4710	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	ccgctgccgacgtcg	10.18	-1	cactgctgccttttg	12.08	-1
7	238	215	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tcgctgccgctctgc	9.77	-1	ctctgccgccgtttc	10.36	-1
8	-2672	-2756	NM_164966	ll.34569	salm	NaN	NaN	NaN	agcgagacgcagcga	8.92	1	aaaatgagcgcagag	10.20	1

250 motifs = 62 238 0 0 thresholds = 9.938 ||7.759 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
2	-488	-406	NM_079463	ll.40287	kni	NaN	NaN	NaN	ttaaaaatgaagt	10.19	-1	aaagatac	9.25	-1
4	-918	-789	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttcaaaatgaaat	10.66	-1	atagatac	7.76	-1
5	-2110	-2260	NM_079253	ll.38995	h	NaN	NaN	NaN	ttgcaattaaatt	11.19	-1	aaagatac	9.25	-1
8	3711	3889	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttaaaatgaatt	11.26	-1	aaagacac	8.13	-1
9	-2874	-2762	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttaaaaatacatt	11.36	-1	aaagacac	8.13	-1
13	780	867	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	ttacaattccact	9.94	-1	gtatcttt	9.25	1

251 motifs = 150 216 0 0 thresholds = 10.260 ||9.583 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-740	-914	NM_169233	ll.41032	hb	NaN	NaN	NaN	ccaccttttt	10.84	-1	taatgacaaattt	10.72	-1
2	-1670	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ccaccttttt	10.84	-1	aaatgggtaattt	10.55	-1
2	-1703	-1813	NM_079463	ll.40287	kni	NaN	NaN	NaN	ccaccgtttt	10.45	-1	aaatgggtaattt	10.55	-1
3	-2014	-2159	NM_079143	ll.38012	kr	NaN	NaN	NaN	cccccttttt	10.65	-1	ttttaacaaattt	9.86	-1
8	-1230	-1429	NM_164966	ll.34569	salm	NaN	NaN	NaN	cccccttttt	10.65	-1	aaatgagaaattt	11.16	-1
8	-1531	-1429	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccaacttttt	10.65	-1	aaatgagaaattt	11.16	-1
8	-1531	-1692	NM_164966	ll.34569	salm	NaN	NaN	NaN	ccaacttttt	10.65	-1	aattgaataattt	11.58	-1

252 motifs = 202 203 0 0 thresholds = 8.353 ||9.319 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-393	-417	NM_169233	ll.41032	hb	NaN	NaN	NaN	aatgcagcgccagaa	9.38	1	aaaaaggcagctgca	9.63	1
2	-2542	-2483	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttagtagctgccat	9.99	-1	aaaaagtcagcgcag	10.54	1
4	-1452	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	atcgctgctcctgaa	8.78	1	cactgctctcgtttt	10.63	-1
4	-1498	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	cgatttcgctgcctt	9.51	-1	cactgctctcgtttt	10.63	-1
4	-1780	-1638	NM_078946	ll.36039	eve	NaN	NaN	NaN	ttttttcgctgcgct	11.03	-1	cactgctctcgtttt	10.63	-1
6	-226	-77	NM_078700	ll.33059	run	NaN	NaN	NaN	tgttgcggcggcaat	8.79	-1	caaacgccggcagag	11.50	1
6	-4639	-4564	NM_078700	ll.33059	run	NaN	NaN	NaN	aacgccgcagccgca	8.92	1	cactgctgccttttg	12.08	-1
7	-410	-538	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	aaggcagcgcactca	9.97	1	cagtgctgtcttttt	9.56	-1

253 motifs = 58 140 0 0 thresholds = 10.008 ||9.775 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
7	-765	-657	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	ataaatttgaaattttt	11.70	1
8	3646	3562	NM_164966	ll.34569	salm	NaN	NaN	NaN	aactgcaattg	11.28	-1	aacattataattaattt	11.83	-1
9	2863	2764	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	agctgcaattt	10.32	-1	ataattttcaacacttt	9.96	1
13	-1337	-1458	NM_078834	ll.34673	pdm2	NaN	NaN	NaN	caattgcagtt	11.28	1	atatatattatataatt	11.40	1

254 motifs = 4 100 0 0 thresholds = 7.109 ||9.655 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-3377	-3466	NM_169233	ll.41032	hb	NaN	NaN	NaN	cttacgcggaagtgtgt	7.42	1	gcgcacaaaaaacg	11.76	1
3	-509	-392	NM_079143	ll.38012	kr	NaN	NaN	NaN	cacaagcggaagtggtc	7.59	1	gcgaagataattcg	10.77	1
4	1088	1163	NM_078946	ll.36039	eve	NaN	NaN	NaN	aaaacccgaaagtcatg	8.23	1	gcgcaaataattcg	11.78	1
8	-2248	-2168	NM_164966	ll.34569	salm	NaN	NaN	NaN	catcctttcctcatttt	7.23	-1	cattttatttgcgc	10.80	-1
8	-2248	-2223	NM_164966	ll.34569	salm	NaN	NaN	NaN	catcctttcctcatttt	7.23	-1	cgtctttctttcgc	10.51	-1

255 motifs = 27 224 0 0 thresholds = 8.216 ||9.031 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2402	2207	NM_169233	ll.41032	hb	NaN	NaN	NaN	ttaaataaatatgcta	9.31	1	cctgcccccttggc	9.36	-1
5	1113	914	NM_079253	ll.38995	h	NaN	NaN	NaN	cattctctttattttt	8.88	-1	cgcgtggtggctgc	11.03	1
6	-879	-685	NM_078700	ll.33059	run	NaN	NaN	NaN	gataatatttatgata	8.44	-1	cccgcccccgcccc	9.03	-1
6	-879	-703	NM_078700	ll.33059	run	NaN	NaN	NaN	gataatatttatgata	8.44	-1	cccgcccccgcccc	9.03	-1
7	312	231	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tataatatttattatc	8.75	-1	cccgcgctggcagc	10.64	1

256 motifs = 102 233 0 0 thresholds = 10.493 ||7.728 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-2496	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttgaaaaaaaaaaa	13.00	1	gctaccta	7.73	-1
1	-2510	-2668	NM_169233	ll.41032	hb	NaN	NaN	NaN	tttttgaaaaaaaaaaa	13.00	1	gctaccta	7.73	-1
2	728	646	NM_079463	ll.40287	kni	NaN	NaN	NaN	tgttgtgatcataaaaa	11.52	1	tctacctg	8.68	-1
3	-3043	-3081	NM_079143	ll.38012	kr	NaN	NaN	NaN	tttttaacattccaaaa	10.97	-1	tctacctg	8.68	-1
7	-3934	-4098	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttttgtaagaaaataa	11.46	1	tctaccta	7.77	-1

257 motifs = 20 43 0 0 thresholds = 6.677 ||10.138 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
3	-2638	-2441	NM_079143	ll.38012	kr	NaN	NaN	NaN	tgtgacctc	7.25	-1	ctatttgaatat	10.45	-1
4	-3232	-3040	NM_078946	ll.36039	eve	NaN	NaN	NaN	tctgacccc	6.90	-1	caatttgcatct	11.46	-1
8	2001	2032	NM_164966	ll.34569	salm	NaN	NaN	NaN	cgtgagccc	6.83	-1	cgatttgcatat	11.84	-1
12	4230	4341	NM_057311	ll.34669	nub	NaN	NaN	NaN	gctgacccc	7.84	-1	cgatttgaattt	11.11	-1

258 motifs = 79 246 0 0 thresholds = 10.489 ||6.627 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	715	578	NM_169233	ll.41032	hb	NaN	NaN	NaN	taaattttaa	11.45	-1	aggtagaa	6.63	-1
3	-1234	-1197	NM_079143	ll.38012	kr	NaN	NaN	NaN	taaatttgaa	10.63	-1	aggtaggc	8.51	-1
7	-4003	-4091	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	taaattttaa	11.45	-1	aggtagaa	6.63	-1
8	2508	2315	NM_164966	ll.34569	salm	NaN	NaN	NaN	taaattttaa	11.45	-1	aggtatac	7.56	-1

259 motifs = 38 188 0 0 thresholds = 9.789 ||8.817 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-1188	-1093	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctctgccaacgcccta	10.50	-1	ccagctattt	9.53	-1
1	-1188	-1252	NM_169233	ll.41032	hb	NaN	NaN	NaN	cctctgccaacgcccta	10.50	-1	gcggcgattt	9.20	-1
4	1066	1171	NM_078946	ll.36039	eve	NaN	NaN	NaN	cccctgccgccgctcca	9.88	-1	ccagcgaatt	9.37	-1
9	-2091	-2126	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	gggggcgctggtggtgg	13.56	1	gcagcaattt	9.41	-1
10	-1475	-1626	NM_080310	ll.31227	gt	NaN	NaN	NaN	ccacatcccacgccgca	12.18	-1	gcagctaatt	9.05	-1

260 motifs = 178 240 0 0 thresholds = 8.704 ||7.209 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2512	2339	NM_169233	ll.41032	hb	NaN	NaN	NaN	gccagatagcacagcaccatcc	10.61	-1	gttagtgt	7.37	-1
4	1938	2005	NM_078946	ll.36039	eve	NaN	NaN	NaN	gccacccagtacggcaagcccc	11.70	-1	gttactta	7.80	-1
6	-135	-327	NM_078700	ll.33059	run	NaN	NaN	NaN	gccaaccacaccaccataccgc	10.34	-1	gttagtgt	7.37	-1
8	-2359	-2556	NM_164966	ll.34569	salm	NaN	NaN	NaN	gctctctgcttggcctggtggc	12.09	1	gttagtgt	7.37	-1
12	-244	-178	NM_057311	ll.34669	nub	NaN	NaN	NaN	gcccacgagcgaaccacaaacg	8.71	-1	gttagttt	8.30	-1

261 motifs = 49 220 0 0 thresholds = 8.665 ||8.923 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	3527	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaaaaataaaa	12.09	1	gcggccacgaaacg	10.44	1
1	3505	3350	NM_169233	ll.41032	hb	NaN	NaN	NaN	aaaaaaaaaataaaa	12.09	1	gcggccacgaaacg	10.44	1
2	406	219	NM_079463	ll.40287	kni	NaN	NaN	NaN	tttattttttactgt	9.96	-1	acgatcgcgaatcg	9.17	1
6	-4673	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	acaaccaaaacaaca	10.21	1	gcggtcggaagccg	10.04	1
6	-4933	-4734	NM_078700	ll.33059	run	NaN	NaN	NaN	aaaaaaaaaaagaaa	12.02	1	gcggtcggaagccg	10.04	1
7	-459	-585	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	tttgactttttttgt	10.79	-1	gcgcacaaaaggcg	11.02	1
8	-437	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgttattgtttgtgt	10.57	-1	acgtacgcaaaccg	9.72	1
8	-543	-533	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgtgtgtgtgtgtgt	10.61	-1	acgtacgcaaaccg	9.72	1
8	-543	-663	NM_164966	ll.34569	salm	NaN	NaN	NaN	tgtgtgtgtgtgtgt	10.61	-1	gcgagcgagaggcg	10.64	1
8	-3625	-3606	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttctgttttctttt	10.94	-1	gagaccgcaaagcg	10.55	1
8	-3656	-3606	NM_164966	ll.34569	salm	NaN	NaN	NaN	tttctgttttctttt	10.94	-1	gagaccgcaaagcg	10.55	1
8	-3695	-3606	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttccgttttttattt	9.15	-1	gagaccgcaaagcg	10.55	1
9	6660	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	tattattttgatttt	10.37	-1	gcgtacacaaaacg	10.40	1
9	6581	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	acatgaaaagaaaca	10.05	1	gcgtacacaaaacg	10.40	1
9	6573	6599	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	aaatacacacacaca	11.16	1	gcgtacacaaaacg	10.40	1

262 motifs = 71 77 0 0 thresholds = 9.884 ||9.590 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	2131	1951	NM_169233	ll.41032	hb	NaN	NaN	NaN	ggctgcactcgttgtggccaca	12.55	1	acggatttttcaacaaaa	10.79	1
9	2549	2410	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ggcacccatttgcgtggccata	13.25	1	aaaaattttaataaaaaa	11.90	1
10	-1013	-1120	NM_080310	ll.31227	gt	NaN	NaN	NaN	gatgcctctctttctggccaga	10.97	1	aaggatttcgaaacaaaa	10.49	1
11	-4456	-4480	NM_164546	ll.33583	odd	NaN	NaN	NaN	ttttgccaaataaagtgcaacc	12.13	-1	attattttgccaaataaa	10.84	1

263 motifs = 168 194 0 0 thresholds = 8.465 ||9.307 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
5	-2204	-2027	NM_079253	ll.38995	h	NaN	NaN	NaN	ttttggccagc	11.21	-1	ttgatcggctgcca	10.54	-1
6	-2243	-2256	NM_078700	ll.33059	run	NaN	NaN	NaN	ttttggccagt	10.42	-1	ttggtgggccgcaa	10.30	-1
8	-319	-508	NM_164966	ll.34569	salm	NaN	NaN	NaN	ttttggcgagt	9.99	-1	aggcagccgaacaa	9.44	1
9	-277	-97	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	ttttggggaat	8.97	-1	gggcagcccgtcga	9.75	1

264 motifs = 58 212 0 0 thresholds = 10.008 ||8.953 ||NaN ||NaN ||

t	p1	p2	nm	ll	ug	chr	pos	strand	seq1	score1	strand1	seq2	score2	strand2
1	-577	-396	NM_169233	ll.41032	hb	NaN	NaN	NaN	aactgcaattg	11.28	-1	caaaatgcagcgccagaaaatgcaaa	10.71	1
3	-3075	-3009	NM_079143	ll.38012	kr	NaN	NaN	NaN	acctgcaattt	10.72	-1	ttttgagttcaataagcttcattttt	10.38	-1
3	-3075	-3144	NM_079143	ll.38012	kr	NaN	NaN	NaN	acctgcaattt	10.72	-1	ttttaaattattgacttgtctttttt	12.79	-1
4	-1666	-1788	NM_078946	ll.36039	eve	NaN	NaN	NaN	acctgcaattg	11.22	-1	tttttgttcccattgtgcgctttttt	12.73	-1
7	-765	-641	NM_057345	ll.42037	abd-A	NaN	NaN	NaN	atctgcaattt	10.44	-1	tttcaaccataaatttgaaatttttc	10.15	-1
9	4965	4796	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	acctgcaattg	11.22	-1	ttttgttgcggcttgttacttttttt	11.30	-1
9	2863	2793	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	agctgcaattt	10.32	-1	tttcaacactttgtttactaattttt	9.27	-1
9	2863	2683	NM_080500	ll.42034	Ubx	NaN	NaN	NaN	agctgcaattt	10.32	-1	aaaaaaataaaaaaaaccagctcaga	9.37	1

Questions? --> kreiman@mit.edu

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